TTCTATTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCTN
AGAGAGATCCGGCGGNAATTCCTNNTTATATTTTTCTCCGCATGNAATGG
TTNTNNTGTAAAAAATATTCTGGTCCCTCCCTCTAAGCTTAATTGGTTCC
CATGTATAAATTAATGGGGGTTGAATTTTTTTATTTTCCCGGTCCCCACA
TGGTATTGGAGGTGAAAATCCAATTGGAACCGGAAATTTTTTTAACCACA
CTCCTTTTTAGTGAAAAAACAAGGGCTTTTTAAAACCCCTTAACGCCCCC
CCCCACCCCCCATTTTTTGTGCCCCCCCCCCCAAAACACGCAGAGAAAAC
ACCACGGGCGCGTGGGTGTCCAACACTGTGTTTTTTTTTTAAAAAAACGC
CGCGGGGGGGGGTTTTTCCCCCCCCCAAAAAAAAAAAGAGGGCGGGGGGA
GTTTTTTTTTTTTTCCCCCCCCTTAAAACACAGGCAAAAAAATTCTCCCC
CCCCCGCAAAAAAAAGTGTTTTTCCTCTCTCCAAAAAAAAAAAAAATCCT
CTTGGGGGGGGGTTTCCCCCCCCCCCCGAAAGAAAAAAAACACAACCCCT
CCCCCACCCCTCTTTCTTTTTTCTTTTTTTATTTAAAATTAAAAAGAACG
GAGCCGCGGCCGCCCCTATACACATCATAACTCACTAACAGTACTTGCCA
GGGTTGGTTGTATTTACTCCTCCACATTCCTTTCACCCTCTCTCCATCTC
GCTGTCTATCTCACTATCCCTTACCCCNCACNNNNCGCACTCACCCACCC
ACCACCACCCATCTTTCTCCACTTAGATTCCTCTCGAAATTTTCTTTTCT
TTTTTCTT

ACAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTTCATAAACATACTGATCTTAA
ATTAGTGTAAATAGAAAATTTCCTATAAAATTCAATGCACAGATTATTTT
ATTATAATAGTGTGATGATTCTAAATTAAAAATTAAAGTTTTTATTACAA
ATTTAATCTAGAAAGTATAGTTAGAATCTTGCATTAGATTTTATAAGTTA
ACACTGGATGATTATTCCATGACTCGTTCTCCAAATTGCCAGTCTTAAGA
AAAAAGTTTCTGAATTTGTTCTATTTCAACGATTGTGCATTGTGCACTTC
GCATTCCTCATTTTTTTTTCTCCTTATGTCAGATGAACCTTCAAATGTGT
AGTTTGTAGCCTTATGTATGTGTGAACATAAAACAAACAAAAAAATAAGA
TTGTATTTTAATCAACTTTATTGAAATAGTTTACAAGCAAATCATTATAT
GTAAGTGTTCAACTGGTGTGAACATAGGCATGACAGCATGGATCTATACA
TTTATTGTACATACAGTGCACCACATGAGAGTTTTTTATTTAAGCATATA
GTCACTTGACTAAAAGCTCTTGTAATCAGCACTTGGTTGCTAGTGTGAAG
AGTCTGTAACCTGAAAGAATCCCTCTTGCTATCCTTTTGTTGATAGATTT
TCTGCTTTGATCTTATAACTTGGGTTAACCAATCTATCAAATAGTAGCTC
ATCTTGTGTCATTTTAATAGCTGTGGGC

Query= MSMg01no515_i13.g1 MSMg01no515_i13.g1 CHROMAT_FILE:
MSMg01no515_i13.g1 PHD_FILE: MSMg01no515_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:53 2005
         (692 letters)



>mm_chr13_26343074_26344163
          Length = 1090

 Score = 1241 bits (642), Expect = 0.0
 Identities = 679/692 (98%), Gaps = 2/692 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttcataaacatactgatcttaaattagtgtaaatagaaaatttcctataaaattcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttcataaacatactgatcttaaattagtgtaaatagaaaatttcctataaaattcaat 260

                                                                       
Query: 61  gcacagattattttattataatagtgtgatgattctaaattaaaaattaaagtttttatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacagattattttattataatagtgtgatgattctaaattaaaaattaaagtttttatt 320

                                                                       
Query: 121 acaaatttaatctagaaagtatagttagaatcttgcattagattttataagttaacactg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaatttaatctagaaagtatagttagaatcttgcattagattttataagttaacactg 380

                                                                       
Query: 181 gatgattattccatgactcgttctccaaattgccagtcttaagaaaaaagtttctgaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgattattccatgactcgttctccaaattgccagtcttaagaaaaaagtttctgaatt 440

                                                                       
Query: 241 tgttctatttcaacgattgtgcattgtgcacttcgcattcctcatttttttttctcctta 300
           |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||
Sbjct: 441 tgttctatttcaacgattttgcattgtgcacttcgcattcctcattttttt--ctcctta 498

                                                                       
Query: 301 tgtcagatgaaccttcaaatgtgtagtttgtagccttatgtatgtgtgaacataaaacaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgtcagatgaaccttcaaatgtgtagtttgtagccttatgtatgtgtgaacataaaacaa 558

                                                                       
Query: 361 acaaaaaaataagattgtattttaatcaactttattgaaatagtttacaagcaaatcatt 420
           ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 559 acaaaaaaataagatcgtattttaatcaactttactgagatagtttacaagcaaatcatt 618

                                                                       
Query: 421 atatgtaagtgttcaactggtgtgaacataggcatgacagcatggatctatacatttatt 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 acatgtaagtgttcaactggtgtgaacataggcatgacagcatggatctatacatttatt 678

                                                                       
Query: 481 gtacatacagtgcaccacatgagagttttttatttaagcatatagtcacttgactaaaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 679 gtacatacagtgcaccacatgagagttttttatttaagcatatagtcccttgacttaaag 738

                                                                       
Query: 541 ctcttgtaatcagcacttggttgctagtgtgaagagtctgtaacctgaaagaatccctct 600
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 739 ctcttgtaatcagcacttggttgctagtgtgaagagtgtgtaacctgaaagaatgcctct 798

                                                                       
Query: 601 tgctatccttttgttgatagattttctgctttgatcttataacttgggttaaccaatcta 660
           |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 799 tgctatccttttgtggatagattttctgctttgatcttctaacttgggttaaccaatcta 858

                                           
Query: 661 tcaaatagtagctcatcttgtgtcattttaat 692
           ||||||||||||||||||||||||||||||||
Sbjct: 859 tcaaatagtagctcatcttgtgtcattttaat 890


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1090
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1080
Effective search space:   736560
Effective search space used:   736560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)