MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-516E05
Chromosome	13 (Build37)
Map Location	18,903,143 - 18,903,426
singlet/doublet	singlet
Overlap gene	Vps41
Upstream gene	Rala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2
Downstream gene	Amph, LOC624044, Tcrg-V4, LOC624071, Tcrg, Tcrg-C, Stard3nl, Epdr1, Sfrp4, Txndc3, A530099J19Rik, Gpr141
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rala (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56044 MGI:1927243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC434585 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 6 Proteins pseudo : _no_value

name	LOC382732 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382732
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins pseudo : _no_value

name	1600012F09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67008 MGI:1914258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vdac3-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22336 MGI:1270159
definition	note : voltage-dependent anion channel 3, pseudogene 1 pseudo : _no_value

name	LOC625310 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625310
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	4930448F12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73992 MGI:1921242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Pou6f2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218030 MGI:2443631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vps41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218035 MGI:1929215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218038 MGI:103574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC624044 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624044
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tcrg-V4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21638 MGI:98634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 4 Proteins

name	LOC624071 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcrg (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 11 Proteins

name	Tcrg-C (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432729 MGI:98624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 5 Proteins

name	Stard3nl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76205 MGI:1923455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epdr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105298 MGI:2145369
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20379 MGI:892010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73412 MGI:1920662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A530099J19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319293 MGI:2441809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr141 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353346 MGI:2672983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rala (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130690 GeneID:56044 MGI:1927243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : v-ral simian leukemia viral oncogene homolog A (ras related) transcript_id : NM_019491.5

name	1600012F09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381189 GeneID:67008 MGI:1914258
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1600012F09 gene transcript_id : NM_025904.2

name	4930448F12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94394724 GeneID:73992 MGI:1921242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930448F12 gene transcript_id : XM_127223.3

name	Pou6f2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27923922 GeneID:218030 MGI:2443631
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 6, transcription factor 2 transcript_id : NM_175006.1

name	Vps41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801712 GeneID:218035 MGI:1929215
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 41 (yeast) transcript_id : NM_172120.3

name	Amph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281851 GeneID:218038 MGI:103574
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amphiphysin transcript_id : NM_175007.1

name	LOC624044 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94394718 GeneID:624044
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to amphiphysin I variant CT4 transcript_id : XM_888730.2

name	LOC624071 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:124486816 GeneID:624071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : similar to T-cell receptor gamma chain C region C7.5 transcript_id : NM_001081305.1

name	Tcrg (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263911 GeneID:434531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 6 Proteins product : T cell receptor gamma chain transcript_id : XM_001475087.1

name	Tcrg-C (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263913 GeneID:432729 MGI:98624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 3 Proteins product : T-cell receptor gamma, constant region, transcript variant 1 transcript_id : XM_001475166.1

name	Tcrg-C (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263915 GeneID:432729 MGI:98624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 2 Proteins product : T-cell receptor gamma, constant region, transcript variant 2 transcript_id : XM_001475188.1

name	Stard3nl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70794798 GeneID:76205 MGI:1923455
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : STARD3 N-terminal like transcript_id : NM_024270.2

name	Epdr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372189 GeneID:105298 MGI:2145369
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ependymin related protein 1 (zebrafish) transcript_id : NM_134065.3

name	Sfrp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803390 GeneID:20379 MGI:892010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secreted frizzled-related sequence protein 4 transcript_id : NM_016687.2

name	Txndc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31795582 GeneID:73412 MGI:1920662
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 3 (spermatozoa) transcript_id : NM_181591.2

name	A530099J19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354396 GeneID:319293 MGI:2441809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A530099J19 gene transcript_id : NM_175688.3

name	Gpr141 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384476 GeneID:353346 MGI:2672983
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 141 transcript_id : NM_181754.3

name	Rala (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328471 CCDS:CCDS26255.1 GeneID:56044 MGI:1927243
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : ral-A protein; RAS-like, family 1 product : ras related v-ral simian leukemia viral oncogene homolog A protein_id : NP_062364.3

name	1600012F09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385398 CCDS:CCDS26256.1 GeneID:67008 MGI:1914258
definition	codon_start : 1 product : hypothetical protein LOC67008 protein_id : NP_080180.1

name	4930448F12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20889493 GeneID:73992 MGI:1921242
definition	codon_start : 1 product : hypothetical protein LOC73992 protein_id : XP_127223.1

name	Pou6f2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27923923 GeneID:218030 MGI:2443631
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : retina-derived POU-domain factor-1 product : POU domain, class 6, transcription factor 2 protein_id : NP_778171.1

name	Vps41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559894 CCDS:CCDS26257.1 GeneID:218035 MGI:1929215
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0005769 - early endosome [Evidence IDA]; GO:0005770 - late endosome [Evidence IDA]; GO:0005874 - microtubule [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : vacuolar protein sorting 41 protein_id : NP_742118.2

name	Amph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281852 CCDS:CCDS26258.1 GeneID:218038 MGI:103574
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007612 - learning [Evidence IMP]; GO:0048488 - synaptic vesicle endocytosis [Evidence IMP] codon_start : 1 product : amphiphysin protein_id : NP_778172.1

name	LOC624044 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82949658 GeneID:624044
definition	codon_start : 1 product : similar to amphiphysin I variant CT4 protein_id : XP_893823.1

name	Tcrg-V4 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:21638 MGI:98634
definition	codon_start : 1 exception : rearrangement required for product

name	LOC624071 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:124486817 GeneID:624071
definition	codon_start : 1 product : similar to T-cell receptor gamma chain C region C7.5 protein_id : NP_001074774.1

name	Tcrg (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263912 GeneID:434531
definition	codon_start : 1 product : similar to T cell receptor gamma MNG8 protein_id : XP_001475137.1

name	Tcrg-C (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263914 GeneID:432729 MGI:98624
definition	codon_start : 1 product : similar to Tcell receptor gamma chain isoform 1 protein_id : XP_001475216.1

name	Tcrg-C (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263916 GeneID:432729 MGI:98624
definition	codon_start : 1 product : similar to Tcell receptor gamma chain isoform 2 protein_id : XP_001475238.1

name	Stard3nl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70794799 CCDS:CCDS26259.1 GeneID:76205 MGI:1923455
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : MLN64 N-terminal homolog protein_id : NP_077232.2

name	Epdr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542612 CCDS:CCDS26260.1 GeneID:105298 MGI:2145369
definition	codon_start : 1 exception : mismatches in translation note : mammalian ependymin related protein 1; upregulated in colorectal cancer gene 1; ependymin related protein 2 product : ependymin 2 protein_id : NP_598826.2

name	Sfrp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710094 CCDS:CCDS26261.1 GeneID:20379 MGI:892010
definition	GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : secreted frizzled-related sequence protein 4 protein_id : NP_057896.1

name	Txndc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31712004 CCDS:CCDS26262.1 GeneID:73412 MGI:1920662
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : thioredoxin domain containing 3 (spermatozoa) protein_id : NP_853622.1

name	A530099J19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316796 GeneID:319293 MGI:2441809
definition	GO_function : GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC319293 protein_id : NP_783619.1

name	Gpr141 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84662743 CCDS:CCDS26264.1 GeneID:353346 MGI:2672983
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : G protein-coupled receptor 141 protein_id : NP_861419.2

name	LOC382732 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382732
definition	number : 2 pseudo : _no_value

name	LOC382732 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382732
definition	number : 1 pseudo : _no_value

name	LOC625310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625310
definition	number : 1 pseudo : _no_value

name	Tcrg-V4 (CDS detail)
type	C_region
link	vega ensembl
xref	GeneID:21638
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 4 Proteins standard_name : Tcrg-V4

name	LOC434585 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263908 GeneID:434585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 6 Proteins product : similar to Bat4 protein pseudo : _no_value transcript_id : XR_031947.1

clone name	MSMg01-364L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364M03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-478O14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-339B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546D03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-487J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-120H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173C22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-421M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-075H05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-305H03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-497N23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-428J02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-070F08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-533N13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-539H18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-137O20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-487D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-516E05.T7 (MSMg01no516_e05.b1)	MSMg01-516E05.TJ (MSMg01no516_e05.g1)
ACC	AG588302	AG588303
length	741	789
length of high quality (start - end)	562 (52 - 613)	286 (82 - 367)
definition	CHROMAT_FILE: MSMg01no516_e05.b1 PHD_FILE: MSMg01no516_e05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:47:55 2005	CHROMAT_FILE: MSMg01no516_e05.g1 PHD_FILE: MSMg01no516_e05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:47:55 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TTTCTACCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XCGCGGAATTCATTGTTTTTGATAGCTGAGTAGTACTCCATTGTGTAAAT GTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACACCTGGTTGTTT CCAGCTTCTGACTATTATAAATATGCTATGAACACAGTGGAGCATGTGTC CTTATTACATGTTGGGGCATCTTCTGGGTATATGCCCAAGAGTGTTATAG CTGGGTTCTCAGGTAGTACTATGTCCAATTTTCTGAAGAAGCACCAGACT GATTTCCAGAGTTCTTGTACCAACTTATAATCCCACCAATAATGGAGGAG TGTTCCTCCTTCTCCACATCCTCACCAACATCTGCTGTCACCTGAGTTTT GATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGAGTTGTTTTGA TTTGCATTTCCCTGATGACTAAGGATATTGAACATTTCTTTGGGTGCTTT GCAGCCATTCACTATTCCTCAGTTGAGAATTCATTGTTTAGCTCTGTACC CAATTTTTTTATTTGGTTCTCTGGAGTCTAACTTCTGGAGTTCTTTCAAT ATATTGGATCTCAGCTTTCTGTCTGACATTGGATTGGTAAAGATCTTTTT CCAATCCGGGGTTTGGCTGGTTTTGCCCCATTGGATAAGGGCCTTTTGCC CTAAAGAAAACCTTTTCAAATTTTTTTAAAGGGCCCCATTG	TTTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTATAAATGCTCGCCAC CTATCAGGTTGAAAGCAAACTTGGTGTCTCTGTGCAAAACAAGTTTGTGC TGGATTTGTGTTACTTACGCGCCCTCCACTAATAACAGCCTTTGTCCAGA AAGGAGCCTTGCAGCTTTGGTTCTCAAAGGGTTTGTATAAAGAAAGTCCA TGGCCTTGTATGGCTCCTGGGCGTGCCCAGTGAACAGCGTTATGGGTTTG AGTGCGACACGTCTTGCTCTGCTCGCTCCCTCTCTGAGATACAAGACACT TAATTTAATGTTGCTTTGGCTTGTAGGGTGTGAAGGTTCTTGATCTCCCC TCTTAGCATAGAATCACCAATGTGCCCCGAGATGACTTAAGTCTTCTCCC ATTACTGTACCCCCTGCAGCCTCTGCTGGAACGACAATTGTGACTCTCAT TATTGATTGGCTATCTTCCATCAAGGCCGTCCACTTGTTCTTTCTATTAA ATCCTAACTTTTTTCTACTCATTGGATCTCTTGACTGGTTACTTGGTATA CCTTATTTTTTTTTATCTGACACCTTGTGGCGCCTTTAATAACTCTATTC CGAATAATTCCAGACCTATTATTATTAGAATTATCCCTTTTCCTATACTA CCTTACGTTACTCTACTCTTTTTTTTTCCACTTTATTCCTTTTTTTTTAA GAACTTATTCTAAAACCTGCGTTCATCTCCCCTCCAAAA
quality values	Open. Hide. 8 10 8 8 6 6 6 6 8 8 8 9 8 10 10 19 34 39 39 28 27 13 14 14 24 22 28 28 41 41 46 27 23 23 19 15 9 9 9 9 9 10 14 25 33 33 28 28 28 28 28 30 48 57 57 36 36 35 37 50 43 37 37 34 47 57 59 47 39 32 32 29 29 31 39 43 46 46 57 57 59 68 68 68 57 57 57 57 54 54 54 54 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 52 52 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 68 68 68 68 68 68 68 59 59 59 59 59 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 43 43 43 59 59 59 54 54 54 54 54 48 43 43 35 35 42 59 59 68 59 59 59 59 59 57 57 48 50 50 50 50 50 50 53 53 53 53 59 59 59 47 37 31 30 29 29 24 23 31 37 37 37 37 59 59 59 59 59 59 59 59 59 59 59 59 59 57 50 48 48 48 48 48 57 59 59 57 57 43 43 43 43 48 59 48 54 54 54 54 54 54 54 48 47 43 43 43 43 57 57 32 41 20 28 28 39 36 36 36 33 30 28 32 32 48 48 40 43 41 41 37 37 32 29 25 30 24 18 14 19 19 19 20 32 44 47 44 39 44 41 37 35 31 39 37 39 39 31 31 32 36 36 43 37 31 31 41 28 26 13 13 13 16 13 17 17 30 30 43 30 23 14 9 9 10 22 26 37 34 32 26 24 28 30 33 26 20 12 15 19 26 17 25 20 24 29 15 15 15 15 15 9 8 8 14 11 13 18 14 14 14 14 25 21 20 16 12 12 12 19 19 35 15 8 6 6 6 7 10 11 11 16 12 11 11 11 11 11 12 12 11 12 8 8 8 8 7 9 8 8 9 9 10 15 13 13 8 8 8 8 8 8 8 8 8 8 8 8 9 11 8 8 11 11 10 12 12 11 8 8 8 8 9 8 6 6 8 8 10 7 8 6 6 10 6 6 8 8 12 12 11 11 10 10 8 11 8 8 10 8 8 8 8 8 8 8	Open. Hide. 11 11 11 9 9 9 9 9 9 9 10 11 9 14 14 14 15 17 22 20 24 37 41 34 36 28 25 25 31 34 41 41 41 32 22 13 12 10 10 8 7 8 8 13 13 25 28 33 39 39 37 37 37 39 36 36 36 33 33 33 59 41 33 30 21 25 11 15 23 27 30 30 39 40 40 26 28 28 24 29 22 30 30 21 21 10 10 10 18 18 37 37 37 41 46 37 37 39 39 39 39 48 47 32 32 22 22 23 37 34 48 46 46 37 37 30 30 30 37 42 46 42 43 43 41 36 43 44 57 57 57 54 43 37 31 23 23 28 37 37 44 44 47 47 57 57 57 57 57 42 36 28 21 21 21 30 32 44 48 48 48 48 47 47 47 46 46 43 43 43 43 43 44 50 50 50 44 50 50 50 50 54 54 57 43 43 32 32 32 33 43 43 44 44 52 38 38 14 14 14 38 38 57 44 43 31 31 35 44 43 43 43 42 42 42 43 43 43 42 35 35 43 43 43 34 32 17 14 16 18 18 23 33 43 39 38 38 23 18 18 16 28 28 43 34 35 29 29 32 44 38 27 18 12 12 24 32 38 43 43 42 43 35 44 31 42 38 43 38 38 20 20 20 38 38 28 33 28 25 25 37 37 37 43 43 33 32 33 43 43 44 44 43 42 33 32 32 20 20 20 27 28 27 31 20 20 27 32 36 35 35 35 28 28 23 23 23 25 36 33 30 37 39 37 37 36 32 28 30 30 39 40 37 35 24 26 14 15 16 29 32 28 28 28 37 31 29 23 23 23 23 37 37 30 40 28 24 24 22 23 22 32 32 28 23 18 18 19 15 15 17 18 11 11 12 11 11 10 8 8 8 8 13 21 28 22 18 12 12 9 11 8 8 6 6 8 6 8 11 17 18 15 11 12 12 11 8 8 8 8 8 9 13 15 19 9 10 10 10 10 11 11 11 11 15 15 15 11 11 20 13 17 16 15 9 8 8 13 12 11 11 15 17 21 13 11 11 15 7 11 6 6 6 6 8 8 10 11 11 17 29 25 21 16 19 12 12 15 16 15 25 20 24 12 12 12 12 19 18 12 9 9 9 9 9 10 15 16 11 10 9 10 10 10 10 11 13 13 13 10 10 10 8 10 10 10 10 11 10 8 8 8 8 8 10 12 12 11 8 8 8 8 8 10 13 11 13 13 13 9 9 9 9 9 9 9 9 8 10 10 10 12 19 19 10 10 10 10 10 10 10 16 19 16 12 10 8 8 8 8 15 10 12 10 10 10 9 9 9 10 10 10 10 8 8 8 8 8 8 10 11 11 10 8 8 9 8 8 8 8 8 8 8 8 8 8 11 8 8 7 9 9 8 8 9 9 8 8 17 18 14 10 11 11 10 8 8 8 8 6 8 8 8 8 10 8 8 8 8 8 8 8 8 8 9 9 9 12 9 10 13 15 11 8 8 10 6 6 8 8 10 8 8 7 6 8 8 8 8 11 11 10 10 10 10 10 9 10 10 12 10 10 10 8 10 8 8 6 6 8 8 9 9 8 10 8 8 8 10 8 8 8 8 8 10 10 9 9 9 9 9 9 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 13 15 20 22 19 15 15 19 13 13 11 11 11 18 13 14 15 15 13 10 11 9 9 10 16 16 20 21 19 11 8 8 8 8 8 10 10 8 8 8 8 8 7 6 8 8 8 8 8 6 6 8 8 8 12 12 9 7 10 8 10 10 10 10 8 8 8 8 11 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no516_e05.g1 MSMg01no516_e05.g1 CHROMAT_FILE:
MSMg01no516_e05.g1 PHD_FILE: MSMg01no516_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:55 2005
         (286 letters)



>mm_chr13_18902943_18903626
          Length = 684

 Score =  511 bits (264), Expect = e-149
 Identities = 280/286 (97%), Gaps = 2/286 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttataaatgctcgccacctatcaggttgaaagcaaacttggtgtctctgtgcaaaaca 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttagaaatgctcgccacctatcaggttgaaagcaaacttggtgtctctgtgcaaaaca 260

                                                                       
Query: 61  agtttgtgctggatttgtgttacttacgcgccctccactaataacagcctttgtccagaa 120
            ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 261 tgtttgtgctggatttgtgttacttacgc--cctccactaataacagcctttgtccagaa 318

                                                                       
Query: 121 aggagccttgcagctttggttctcaaagggtttgtataaagaaagtccatggccttgtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aggagccttgcagctttggttctcaaagggtttgtataaagaaagtccatggccttgtat 378

                                                                       
Query: 181 ggctcctgggcgtgcccagtgaacagcgttatgggtttgagtgcgacacgtcttgctctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 379 ggctcctgggcgtgcccagtgaacagcgttatgggtttgagtgcgacacgtcttgctttg 438

                                                         
Query: 241 ctcgctccctctctgagatacaagacacttaatttaatgttgcttt 286
           |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctcgatccctctctgagatacaagacacttaatttaatgttgcttt 484


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 684
Length adjustment: 9
Effective length of query: 277
Effective length of database: 675
Effective search space:   186975
Effective search space used:   186975
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information