NNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAA
AATGTTCAGCATCTTTAATCATCAGAGAAATGCAAATCAAAACAATCCTG
AGATTCCATCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGATGA
CAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTC
CTCAGAAAATTGGACATAGTACTACCGGAGGATCCCGCTATAATTCTCCT
GGGCATATATCCAGAAGATGTTCCAACCAGTAAGAAAGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATATCCAGAAACTGGAAAGAACCC
AGATTCCCCTCAACACAGGAATGGATACAGAAAATGTGGTACATTTACAC
AATAGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAG
GCAAATGGTCGGACCTGGAGGGTATCATCCTGCCTGAAGTAACCCAATCA
CAAAAGAACTCAAATGATATGTTCTCACTGATAAGTGGATATTAGCCCAG
AAACTTAGAATACCCGTGATATAAGATACAATTTGAAAAACACATGAAAC
TCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTACTTAGAATT
GGGGAAAAAACACCCAG

NNNNCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAAGAAACAACCAAATGA
GGTCAGAAGAGTAGCAGCTGAGTCAGAGGACTGGCCAGTAGTGAGCCAAA
GTGTGTCAGTTAGATGGAGAATCCAAACGATGTTTGTGGCAAGGCAAGAA
TGAGTAGTTGTGTGGATGGCATCGGCAGTGTGGGAAGATATAGCCGTCCC
TGCGCTTCTTCTCTACATGAACAATTTCTAGCTGTGATTAGACTAGTTTC
TTCCACAGGCTACTTGGTGAAGAATGTCACTTTAAACAGTTTGGGGTCCA
GTTCTGAGGCCAGGGAAAGCCTTAGGTCCTTGGGATAGCTTGAGATAACA
AATTGCATGTCCACAGAACACACTGACTTGAGAACGTTGGGGGATGACAG
TCGTGGAAAGGCAGAACTTAGTTTAGCATCATCAACTGTTGCTGCTTCAG
CTGCCTGCAGACTGCTTTCCTGTTCCTCCCAGAACCCAGAATGTTGTGGG
ACTTTTTTTGCTAGTGGAGGATGCTTAGGACATTCTGGGAAAACATCTCT
ACTTCATACTTTTGGCTTTTTCTTTCTCTTAGAGTAACTGATATTAATTA
TTGAGTTATATATTTTTTTCACATATTTTCATACACTATGCCATTTGTCT
TGATTATTTGAGTTGGAGATCACATTTTAGATGAGAAAAATGAGCCTATA
GGCATTGACTAATTTTTCN

Query= MSMg01no522_k05.g1 MSMg01no522_k05.g1 CHROMAT_FILE:
MSMg01no522_k05.g1 PHD_FILE: MSMg01no522_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:17 2005
         (643 letters)



>mm_chr13_19855499_19856539
          Length = 1041

 Score = 1189 bits (615), Expect = 0.0
 Identities = 636/643 (98%), Gaps = 2/643 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttaagaaacaaccaaatgaggtcagaagagtagcagctgagtcagaggactggccagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tttaagaaacaaccaaatgaggtcagaagagtagcagctgagtcagaggactggccagta 782

                                                                       
Query: 61  gtgagccaaagtgtgtcagttagatggagaatccaaacgatgtttgtggcaaggcaagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgagccaaagtgtgtcagttagatggagaatccaaacgatgtttgtggcaaggcaagaa 722

                                                                       
Query: 121 tgagtagttgtgtggatggcatcggcagtgtgggaagatatagccgtccctgcgcttctt 180
           |||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||
Sbjct: 721 tgagtagttgtgtggatggcatcggcagtgtgggaagatatacccgttcctgtgcttctt 662

                                                                       
Query: 181 ctctacatgaacaatttctagctgtgattagactagtttcttccacaggctacttggtga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 661 ctctacatgaacaatttctagctgtgattagactagtttcttccacaggttacttggtga 602

                                                                       
Query: 241 agaatgtcactttaaacagtttggggtccagttctgaggccagggaaagccttaggtcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaatgtcactttaaacagtttggggtccagttctgaggccagggaaagccttaggtcct 542

                                                                       
Query: 301 tgggatagcttgagataacaaattgcatgtccacagaacacactgacttgagaacgttgg 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 541 tgggatagcttgagataacaaattgcatgtccacagaacacactgacttgagaacgtt-g 483

                                                                       
Query: 361 gggatgacagtcgtggaaaggcagaacttagtttagcatcatcaactgttgctgcttcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gggatgacagtcgtggaaaggcagaacttagtttagcatcatcaactgttgctgcttcag 423

                                                                       
Query: 421 ctgcctgcagactgctttcctgttcctcccagaacccagaatgttgtgggactttttttg 480
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 422 ctgcctgcagactgctttcctgtttctcccagaacccagaatgttgtgggactttttttg 363

                                                                       
Query: 481 ctagtggaggatgcttaggacattctgggaaaacatctctacttcatacttttggctttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctagtggaggatgcttaggacattctgggaaaacatctctacttcatacttttggctttt 303

                                                                       
Query: 541 tctttctcttagagtaactgatattaattattgagttatatatttttttcacatattttc 600
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 302 tctttctcttagagtaactgatattaattattgagttatata-ttttttcacatattttc 244

                                                      
Query: 601 atacactatgccatttgtcttgattatttgagttggagatcac 643
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atacactatgccatttgtcttgattatttgagttggagatcac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1041
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1031
Effective search space:   652623
Effective search space used:   652623
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)