NNNNNNNNTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCCATGGAGGACATAGAACAGCTGGGCAGTTAATGCCT
AGTTACTCATTACCTTTTGTGAATTTTTTGAAGGCTATGTGACAGTCTGT
TTTTAGTGTTGTGTGTGTTTTTCTGTTTTTAGTTTTTTAAAGAACATATT
GTTCAAATATAAAAATAGTACCTTAAGGGGTTAATGCAATGACTTGAGAA
GTACTGCTGCTCTCACAGAGGAACTGAGTTTAGCTCCCAGCACCCACATC
AGGCTCACAGCCTCCTGTAACTCCAGCTTCAGGGCATCTAGTGCCACCTT
CTGGCTTCAAGGGGCAGTGCATTCAATGCACAGAAACTTACACATACATA
TAGCTTAAAATGATTTTAAAAGGGAGCGCTTCACTTAGAAATGTAGCCAT
TAAATAATCACATGGCATACATTCACACACACACACACACACACACACAC
ACACACTACACATACTCTTTAAATAAGATCAGCATCTTAGTTACCAAGCA
AACCTAGAGAATTAATTCTCTTGACTAATCCCTCTGAGCCTCCTGACTGT
TTTAAAGAACAGTATGACTTTATCAAGAAGGTTTAGTCATGATTCTGAAG
ACTTACTTACTCCTAATTGTCTTTTGTCTTCAGAGCTTTGGGATAAATGG
ACTTATTCTAGAAATGGTCTTTAGCAGCCTTGTGAGTTCAGCAAGCCCTG
GGTGGGN

NTTTTNCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGACCATGAATGCAT
GTGTAGTAGCTCACAAGTTCAAGCCAGACAAAATCCCAACACAGGAAAGG
AGAAGTGGGCACAAACGCCTGGCCAAGAAGCGATCTGTAATCGATACCTC
CTGGGAGAGGGAAAATCAGTTTTCTCCAATGGGTTAACACTGTGCATACC
AACTCCACTCTAAGGCAGGCTGCCTCACACTCTGGAGTAGTCGGCTAACT
CAAAAGACTCCATGGTTTTTGTTGTTGTTGTTGTTATTGTTTTGTGTTTT
CTATGTTGTTTTGTTTTCTTGTTTCTTTTTACTTTTTGAGAGAGAAAGAC
ATGAGGTTGGGTGAGTAAGGAGTGTGGGGAGGACCTGGGAGGAGTTTGGG
GAGGACAGAGAATATGATAAAAATATATTGTATGAGAAAATTTAAAAGTA
ATTAAAAAACTAAGATACAATGAATACATATGTATGTAGTGTTCAGTCAC
AAGTGCAGTGTTTCTAGCATGCCCCTCCCTCTCAAGGCTCTGGGACTACT
GAGGAGGAAGGGAGGGGAAAATTTAAGAGCCAAAGCTTGGGGAGGACTGC
AGTGCCTTCTGAGCACTGAGGGAGCACTCTACTTGAGACCCCGGAGTACT
GGCTGGCTACACAGACCTGAGTAAGAATCAGTTAGTCAACACTCCAAGAT
GGAGCCGGGCGGGGGCGG

Query= MSMg01no522_n19.b1 MSMg01no522_n19.b1 CHROMAT_FILE:
MSMg01no522_n19.b1 PHD_FILE: MSMg01no522_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:35 2005
         (571 letters)



>mm_chr13_94887767_94888737
          Length = 971

 Score = 1029 bits (532), Expect = 0.0
 Identities = 560/576 (97%), Gaps = 12/576 (2%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttcccatggaggacatagaacagctgggcagttaatgcctagttactcattaccttttgt 67
           |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 196 ttcccacggaggacatagaacaggtgggcagttaatgcctagttcctcattaccttttgt 255

                                                                       
Query: 68  gaattttttgaaggctatgtgacagtctgtttttagtgttgtgtgtgtttttctgttttt 127
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 256 gaattttttgaaggctatgtgacagtctgtttttagtgttctgtgtgtttttctgttttt 315

                                                                       
Query: 128 agttttttaaagaacatattgttcaaatataaaaatagtaccttaaggggttaatgcaat 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 agttttttaaagaacatattgttcaaatataaaaatagtaccttaaggggttaatgcaat 375

                                                                       
Query: 188 gacttg------agaagtactgctgctctcacagaggaactgagtttagctcccagcacc 241
           ||||||      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gacttgtcagtgagaagtactgctgctctcacagaggaactgagtttagctcccagcacc 435

                                                                       
Query: 242 cacatcaggctcacagcctcctgtaactccagcttcagggcatctagtgccaccttctgg 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cacatcaggctcacagcctcctgtaactccagcttcagggcatctagtgccaccttctgg 495

                                                                       
Query: 302 cttcaaggggcagtgcattcaatgcacagaaacttacacatacatatagcttaaaatgat 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cttcaaggggcagtgcattcaatgcacagaaacttacacatacatatagcttaaaatgat 555

                                                                       
Query: 362 tttaaaagggagcgcttcacttagaaatgtagccattaaataatcacatggcatacattc 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tttaaaagggagcgcttcacttagaaatgtagccattaaataatcacatggcatacattc 615

                                                                       
Query: 422 acacacacacacacacacacacacacacacac------tacacatactctttaaataaga 475
           ||||||||||||||||||||||||||||||||      ||||||||||||||||||||||
Sbjct: 616 acacacacacacacacacacacacacacacacacacactacacatactctttaaataaga 675

                                                                       
Query: 476 tcagcatcttagttaccaagcaaacctagagaattaattctcttgactaatccctctgag 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tcagcatcttagttaccaagcaaacctagagaattaattctcttgactaatccctctgag 735

                                               
Query: 536 cctcctgactgttttaaagaacagtatgactttatc 571
           ||||||||||||||||||||||||||||||||||||
Sbjct: 736 cctcctgactgttttaaagaacagtatgactttatc 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)