Query= MSMg01no525_f05.b1 MSMg01no525_f05.b1 CHROMAT_FILE:
MSMg01no525_f05.b1 PHD_FILE: MSMg01no525_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:54 2005
(638 letters)
>mm_chr13_44068642_44069678
Length = 1037
Score = 1114 bits (576), Expect = 0.0
Identities = 620/644 (96%), Gaps = 18/644 (2%)
Strand = Plus / Minus
Query: 9 ggaattctctaatttt----agactttaagttaactgtcccatggtgactagccttgaag 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 ggaattctctaa---taagaagactttaagttaactgtcccatggtgactagccttgaag 889
Query: 65 tagcgctatcaggactttgtgttggcacaagagagagaatg----------ttcatgtat 114
|||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 888 tagcgctatcaggactttgtgttggcacaagagagaaaatgttcagataccttcatgtat 829
Query: 115 gttatttgctggagactaagccatagctatgaagcctacgttgtgtatcttacgtgcatt 174
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 828 gttatttgctggagactaagccacagctatgaagcctacgttgtgtatcttacgtgcatt 769
Query: 175 ctagtctatcaagtcaaggacggactggctcaagatggaaactattggtgaggaaggtgc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ctagtctatcaagtcaaggacggactggctcaagatggaaactattggtgaggaaggtgc 709
Query: 235 tctgagacatgagagtgctattctgactctgcaccttggtcacggcgattctctgttctg 294
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tctgagacatgagagtgctgttctgactctgcaccttggtcacggcgattctctgttctg 649
Query: 295 tggacttattatcaaaaggaatatcccgacagtgagcatttctctgatgtattatttttt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tggacttattatcaaaaggaatatcccgacagtgagcatttctctgatgtattatttttt 589
Query: 355 aaggatctgagcctgtgacctaaactaataaattctctgaattggcacattgctctgctg 414
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 588 aaggatctgagcctgtgacctaaactaataaatgctctgaattggcacattgctctgctg 529
Query: 415 tgaagcttggaacttaaagtaatacacagacaactagacaacgaagtgattctgtgtata 474
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgaagcttgg-acttaaagtaatacacagacaactagacaacgaagtgattctgtgtata 470
Query: 475 aaatatctcttagtcacgttgatcattaagagagacaacaaataaaacccagccaataaa 534
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aaacatctcttagtcgcgttgatcattaagagagacaacaaataaaacccagccaataaa 410
Query: 535 taataaatggagcatgaagatctgaaatcccaagagtgtcagtaatatagagtctatatt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 taataaatggagcatgaagatctgaaatcccaagagtgtcagtaatatagagtctatatt 350
Query: 595 ataaataataattctacaattaggatggatttctttccctctga 638
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ataaataataattctacaattaggatggatttctttccctctga 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1037
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1027
Effective search space: 644956
Effective search space used: 644956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_f05.g1 MSMg01no525_f05.g1 CHROMAT_FILE:
MSMg01no525_f05.g1 PHD_FILE: MSMg01no525_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:54 2005
(615 letters)
>mm_chr13_43908279_43909293
Length = 1015
Score = 1093 bits (565), Expect = 0.0
Identities = 604/617 (97%), Gaps = 4/617 (0%)
Strand = Plus / Plus
Query: 1 tctggaaaaaaaaatagatttattaagagacgatgag-aaaaaagaccctactatgggac 59
||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 201 tctggaaaaaaaa-tagatttattaagagatgatgaggaaaaaagaccctactatgggac 259
Query: 60 aggtccctgcttggggacatgtgatatgaagtacaccataagagtgcaggctttgtgctg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggtccctgcttggggacatgtgatatgaagtacaccataagagtgcaggctttgtgctg 319
Query: 120 gggactttacatctgttactttcccctactctatagcttaggcaactggacctcagagag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 320 gggactttacatctgttactttcccctactctatagcttaggcaactggacctcaaagag 379
Query: 180 gttaaggagtgtgcagatgtctggaacctaaacgtagaggcaggatct-ggactctgctt 238
|||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||
Sbjct: 380 gttaaggagtgtgcagatgtctggaacctaaacgtagaggcaggat-tcggactcggctt 438
Query: 239 tgtgacttctgaatcctggcacttccctcccaactgtgttctgtgagtgttcttggaagg 298
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 439 tgtgacttctgaatcctggcacttccctcccaaccgtgttctgtgagtgttcttgggagg 498
Query: 299 aggaagcccacacatcttctatagaacaggcctggctgtcctacttgttcctttttagtt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aggaagcccacacatcttctatagaacaggcctggctgtcctacttgttcctttttagtt 558
Query: 359 ctcattcatgctttttcaatcaaatacaagaatacccaagcaacagaaacggcacgaatc 418
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctcattcatgcgttttcaatcaaatacaagaatacccaagcaacagaaacggcacgaatc 618
Query: 419 cacctatgtccaggggggtggcagggcttgcagtacccactggcaggatccccaggctcg 478
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 619 cacctatgtccagaggggtggcagggcttgcagtacccactggcaggatccccaagctcg 678
Query: 479 gtatgagcctgctgtagaccacagatggcctgaaccagatgcccttggcagggaaggaca 538
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 679 gtatgagcctgctgtagaccacagatggcctgaaccggatgcccttggcagggaaggaca 738
Query: 539 gaagcaagatggctgctaggcccaggagcttcccagtagagcgcctgaattatgtctctt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaagcaagatggctgctaggcccaggagcttcccagtagagcgcctgaattatgtctctt 798
Query: 599 tggtaaatctgatccat 615
|||||||||||||||||
Sbjct: 799 tggtaaatctgatccat 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
