Query= MSMg01no526_e05.b1 MSMg01no526_e05.b1 CHROMAT_FILE:
MSMg01no526_e05.b1 PHD_FILE: MSMg01no526_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:08 2005
(464 letters)
>mm_chr13_43806863_43807726
Length = 864
Score = 814 bits (421), Expect = 0.0
Identities = 453/467 (97%), Gaps = 6/467 (1%)
Strand = Plus / Minus
Query: 4 ggaattctgctctgttggcttggggatctgtccgttctttctggtgagggttgttgattc 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ggaattctgctctgagggcttggggatctgtccgttctttctggtgagggttgttgattc 488
Query: 64 tgggcacagactcaagagctggaaaatgtcaggctttgctctgcaagtccctctgtgatg 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgggcacagactcaagaactggaaaatgtcaggctttgctctgcaagtccctctgtgatg 428
Query: 124 gggagacgcatgtgaagagaatacaaatggggaacgctccaggcaacagaatgaagccac 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gggagacgcatgtggagagaatacaaatggggaacgctccaggcaacagaatgaagccac 368
Query: 184 cagccactctccaggcctttagagagacagagaaagagctgtggggacacattagttctg 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cagccactctccaggcctttagagagacagagaaagagctgtggggacacattagttcta 308
Query: 244 gtggtttccccctcaaggagggaacacatggcctcgttgtgcacatgaacactgcagtat 303
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 307 gtggtttccgcctcaaggagggaacacatggcctcgctgtgcacatgaacactgcagtat 248
Query: 304 ttcccttcaccacagtcgcctgtgttgccatttttatcgacagatgtgtatatgtgtcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttcccttcaccacagtcgcctgtgttgccatttttatcgacagatgtgtatatgtgtcta 188
Query: 364 tatgtatagcgtgtgtctgtgtgtctatacatatagtgtgtttgtgtgtgtagtgtgtat 423
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 187 tatgtatagcgtgtgtctgtgtgtctatacatgtagtgtgtttgtgtgtgtagtgtgtat 128
Query: 424 ttgtgtgtggtgtgtgtgtgtgt------ctgtttatctgtgtcgct 464
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 127 ttgtgtgtggtgtgtgtgtgtgtgtgtgtctgtttatctgtgtcgct 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_e05.g1 MSMg01no526_e05.g1 CHROMAT_FILE:
MSMg01no526_e05.g1 PHD_FILE: MSMg01no526_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:08 2005
(671 letters)
>mm_chr13_43633460_43634532
Length = 1073
Score = 1228 bits (635), Expect = 0.0
Identities = 663/673 (98%), Gaps = 2/673 (0%)
Strand = Plus / Plus
Query: 1 ttgatgcccctagactcctgtgttttcctaccttcgttaaccccttcatagtagctgtat 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgacgcccctagactcctgtgttttcctaccttcgttaaccccttcatagtagctgtat 260
Query: 61 catttctcctcacacagggacttaaaacactgtacacacaggttaagaaagataattctt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 catttctcctcacacagggacttaaaacactgtacacacaggttaagaaagaaaattctt 320
Query: 121 tcaaataaaatttattttgaaaatcagacattcattttcaaatatattttctctgtaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaataaaatttattttgaaaatcagacattcattttcaaatatattttctctgtaaat 380
Query: 181 acaa--tttttttaggtattaaatttatttgtcatttaccggaggcaatagaatggtatc 238
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 acaaattttttttaggtattaaatttatttgtcatttacccgaggcaatagaatggtatc 440
Query: 239 attttacaatgggtagaattaacagcttcaatacggttgttcaagatagaaggtatggtc 298
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 attttacaatgggtagaattaacagcttcaatactgttgttcaagatagaaggtatggtc 500
Query: 299 tagcttcatacattcctcctgaaccacaggaaagtcgcattagccacacaaacacgaatt 358
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 tagcttcatacattcctcctgaaccacaggaaaggcgcattagccacacaaacacgaatc 560
Query: 359 tgttatcttagataataaaatagattcactctatacaatgataaaatacaactgcatact 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttatcttagataataaaatagattcactctatacaatgataaaatacaactgcatact 620
Query: 419 tgctgaagcaataaaaggattacaaaattatctggattatcactgaaggaatgttaagta 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgctgaagcaataaaaggattacaaaattatctggattatcactgaaggaatgttaagta 680
Query: 479 caaatctgtaaaaagatatttcctgaatacaatttcaaccgggctaaacattctcaaaga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaatctgtaaaaagatatttcctgaatacaatttcaaccgggctaaacattctcaaaga 740
Query: 539 tcttacatacatatagaataaattattcctggttaacccgcttttattccttagtgctat 598
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 741 tcttacatacatatagaataaattattcctggttaacccgcttttattctttagtgctat 800
Query: 599 aaaagctgtaacaacttggtcaccttgaagtcccaagttctctagggtaggctctgccag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaaagctgtaacaacttggtcaccttgaagtcccaagttctctagggtaggctctgccag 860
Query: 659 tcctgccacacag 671
||||| |||||||
Sbjct: 861 tcctggcacacag 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1073
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1063
Effective search space: 702643
Effective search space used: 702643
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
