NNAAGTATGTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCACTATTGTGCATACAGAGCCAAGAACACTCAGCC
CAGTAACAAGCCCCACTTTCCACCCCTGATACCTCCACAAATTCTCTCCT
TCCTTCCTTCCCAGGTTTAACATCTTCTCCACAATAGAAAAATTTCCAAT
TTCTTCTTAGGAAGAACTAACTGCTGCCTACTCTTCTACTCACTTCTGAT
TATCTCAGATCTTATTAANNTAAGAGAAAATTGACNATGGGCNGAACCCC
TTCCGAATGGCCCCAATAGGGGGGGCTAAACCTTTCCCCTATAAAAAAAA
GGGTTTCAAACACCCCCCCTTTTTTTTTTTCCCCTCGAAATTTCCCTTTG
GGAAGAAAATCCCCCCAAAGGAGTTTTCTCGGGGGGGGTAAAAAAAAAAA
AAAATTTTTTTTTTTCTGTTCCCCCCCCCCATAAAAGTGTGGGGAGAAAA
ATTTTTTTTNCTAAACCCTCCCCACAAAATTACTAATATTTTTTTTTTTT
TTACTCCTTTTTCTATTTTTATGTATAAACTCTGATTTTAAAACTATNAT
CATATTTCTTTCTTTTTTTCATCTCTTTATACATTTTTTTTTATAATTTA
TAATATTA

NCAAAAAATCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGGAGACAGTTTC
ACTGTGACTGCCAATAGCCATCCACAACCCAGGCTTCTCTTGTAAAGGAC
TTTGAAGTCTGTTCTGGGGAGACTAGCCTGCAATGCCCTTCACCTCCTGC
TTCCCCCCTTCTTTCTTGTTTTGCTTCTCCTAACTTTGAATATGTCACTA
GACTTTTAATGGATTCCCTTTTGTGTTTTGGGATAATATTTTTATGTATA
TTCTTTCATAGTCCGAGACCATGCACAGTTAAAAAATCGACTTTGAACTC
ATGAGAGCACTGTGCCTGGGATTTAGATTTTTCTGTTTTGATCCTTTCTC
TAGACATTAGCCAAGGCCATCAGCTGACCCTAGGATGATCCTTTGTCCTT
TTCAGGGTCAATATCACCATTTTATAGATGGGGAGGAAGATACTGCCCAA
GTCAGGCAGATTAAATATTATGGAAGAATGGGAGACTGTTTTTCGAGACA
GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAG
GCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTACCGAGTGCTGGG
ATTAAAGGCATGCGCCACCATGCCCGGCTGAATGGGAGACTGTTAGCTGC
TGGTGCATGAACATTTTCCTGGGGG

Query= MSMg01no527_a06.g1 MSMg01no527_a06.g1 CHROMAT_FILE:
MSMg01no527_a06.g1 PHD_FILE: MSMg01no527_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:07 2005
         (640 letters)



>mm_chr13_45241695_45242734
          Length = 1040

 Score = 1205 bits (623), Expect = 0.0
 Identities = 635/639 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtggagacagtttcactgtgactgccaatagccatccacaacccaggcttctcttgtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtggagacagtttcactgtgactgccaatagccatccacaacccaggcttctcttgtaa 260

                                                                       
Query: 61  aggactttgaagtctgttctggggagactagcctgcaatgcccttcacctcctgcttccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggactttgaagtctgttctggggagactagcctgcaatgcccttcacctcctgcttccc 320

                                                                       
Query: 121 cccttctttcttgttttgcttctcctaactttgaatatgtcactagacttttaatggatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccttctttcttgttttgcttctcctaactttgaatatgtcactagacttttaatggatt 380

                                                                       
Query: 181 cccttttgtgttttgggataatatttttatgtatattctttcatagtccgagaccatgca 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 cccttttgtgttttgggataatatttttatgtatattctttcatattccgagaccatgca 440

                                                                       
Query: 241 cagttaaaaaatcgactttgaactcatgagagcactgtgcctgggatttagatttttctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagttaaaaaatcgactttgaactcatgagagcactgtgcctgggatttagatttttctg 500

                                                                       
Query: 301 ttttgatcctttctctagacattagccaaggccatcagctgaccctaggatgatcctttg 360
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 ttttgatcctttctctagacattagccaaggccatcggctgaccctaggatgatcctttg 560

                                                                       
Query: 361 tccttttcagggtcaatatcaccattttatagatggggaggaagatactgcccaagtcag 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 tccttttcagggtcaatatcaccattttatagatggggaggaatatactgcccaagtcag 620

                                                                       
Query: 421 gcagattaaatattatggaagaatgggagactgtttttcgagacagggtttctctgtata 480
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 gcagattaaatattatggaagaatgggagactgttttttgagacagggtttctctgtata 680

                                                                       
Query: 481 gccctggctgtcctggaactcactttgtagaccaggctggcctcgaactcagaaatccgc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gccctggctgtcctggaactcactttgtagaccaggctggcctcgaactcagaaatccgc 740

                                                                       
Query: 541 ctgcctctgcctaccgagtgctgggattaaaggcatgcgccaccatgcccggctgaatgg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgcctctgcctaccgagtgctgggattaaaggcatgcgccaccatgcccggctgaatgg 800

                                                  
Query: 601 gagactgttagctgctggtgcatgaacattttcctgggg 639
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gagactgttagctgctggtgcatgaacattttcctgggg 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)