Query= MSMg01no527_a22.b1 MSMg01no527_a22.b1 CHROMAT_FILE:
MSMg01no527_a22.b1 PHD_FILE: MSMg01no527_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:10 2005
(566 letters)
>mm_chr13_24130787_24131752
Length = 966
Score = 1073 bits (555), Expect = 0.0
Identities = 561/563 (99%), Gaps = 1/563 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactaagcagcccaggaaaaatgtacactctcagtcaccctcctgcctcaggtt 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 859 ggaattcactaagcagcccaggaaaaatgtacactctcagtcaccct-ctgcctcaggtt 801
Query: 64 cccgcatgctggggttccaggggtacactgccactttcaggaatgtcagaattttagtac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cccgcatgctggggttccaggggtacactgccactttcaggaatgtcagaattttagtac 741
Query: 124 aggctaccatagttcttggcctacagtcactgctgatagacacatcaaaatggctgtcgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggctaccatagttcttggcctacagtcactgctgatagacacatcaaaatggctgtcgt 681
Query: 184 gacactgtgtgattacagatgccattgctaagctgttcaacttagaactgtattactggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gacactgtgtgattacagatgccattgctaagctgttcaacttagaactgtattactggg 621
Query: 244 aaatgggtgagccatggatgtggaccaagtgttctgtcccatctgccccaccatgacttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaatgggtgagccatggatgtggaccaagtgttctgtcccatctgccccaccatgacttc 561
Query: 304 ctctcctgaccagcaattttgttctctgcttgtctttgaaagatatctgggtgatatgta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctctcctgaccagcaattttgttctctgcttgtctttgaaagatatctgggtgatatgta 501
Query: 364 atatgtaacatctgttttcttcaaagatgttagtctagaattctgatcatgtttctgaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atatgtaacatctgttttcttcaaagatgttagtctagaattctgatcatgtttctgaga 441
Query: 424 gcaaggaccccatggctcacctttcatcaactctcaaggggacccacaaaaagttgtgtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcaaggaccccatggctcacctttcatcaactctcaaggggacccacaaaaagttgtgtt 381
Query: 484 tttttaaattacattctgttataaaaataagctgtcagacattaggtagaacatcataaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttttaaattacattctgttataaaaataagctgtcagacattaggtagaacatcataaa 321
Query: 544 ttagtgtaaagaaagcttgaagt 566
|| ||||||||||||||||||||
Sbjct: 320 ttggtgtaaagaaagcttgaagt 298
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_a22.g1 MSMg01no527_a22.g1 CHROMAT_FILE:
MSMg01no527_a22.g1 PHD_FILE: MSMg01no527_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:10 2005
(640 letters)
>mm_chr13_23963616_23964655
Length = 1040
Score = 1222 bits (632), Expect = 0.0
Identities = 638/640 (99%)
Strand = Plus / Plus
Query: 1 taagttatcttcatcaccagcctcccccagcagatgcaggcttggctgcagtgagtctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagttatcttcatcaccagcctcccccagcagatgcaggcttggctgcagtgagtctct 260
Query: 61 ttccagaaactgagactacagacaggttcacatggggctgtggagaatggtctgtctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccagaaactgagactacagacaggttcacatggggctgtggagaatggtctgtctcca 320
Query: 121 gagagggtggcactagtaagaagacagtcatatttcacctctcttaaggtacagaaaatg 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagagggtggcactaataagaagacagtcatatttcacctctcttaaggtacagaaaatg 380
Query: 181 agttttactcatatttactcctttcccaatatttggctgctatgtacatgtaaatttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttttactcatatttactcctttcccaatatttggctgctatgtacatgtaaatttcta 440
Query: 241 accaccgcagcctctctctgcctgatagcttactgtcaatttgtcttgctgggtaagcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accaccgcagcctctctctgcctgatagcttactgtcaatttgtcttgctgggtaagcct 500
Query: 301 actggcagtcaatgtcctcaatttttatttctttaataaagtatttttcattagattaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actggcagtcaatgtcctcaatttttatttctttaataaagtatttttcattagattaaa 560
Query: 361 caaaaaaaaaatccttgggttggcagggctgcttgttttctatagttatcaggttttcta 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaaaaaaaatccttgggttgtcagggctgcttgttttctatagttatcaggttttcta 620
Query: 421 tatattttaaatgagcaacaacaaaaatatcgtgaaaatgcaatgttaactaaggccctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatattttaaatgagcaacaacaaaaatatcgtgaaaatgcaatgttaactaaggccctc 680
Query: 481 agtggaggtgaaatgtcactgcatctatctggtaagtcctcctttgatcccagttttcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtggaggtgaaatgtcactgcatctatctggtaagtcctcctttgatcccagttttcag 740
Query: 541 tcagagaggggtcctgggtcctagttcagttgcttcctgaattgtgttgaccagtgtgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcagagaggggtcctgggtcctagttcagttgcttcctgaattgtgttgaccagtgtgtt 800
Query: 601 ttacacccacagtggatggagaccaagcccagcaacaaga 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttacacccacagtggatggagaccaagcccagcaacaaga 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
