Query= MSMg01no528_e08.b1 MSMg01no528_e08.b1 CHROMAT_FILE:
MSMg01no528_e08.b1 PHD_FILE: MSMg01no528_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:49 2005
(702 letters)
>mm_chr13_46310406_46311506
Length = 1101
Score = 1236 bits (639), Expect = 0.0
Identities = 684/699 (97%), Gaps = 3/699 (0%)
Strand = Plus / Plus
Query: 5 gaattccttctgcccactgtctctccttctagcattggatggcagagtctaggtccttga 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattccttctgcccactgtctctccttctagcattggatggcagagtctagatccttga 264
Query: 65 gcctccagactggaaatcatctccccagttctctctgatctcaggactcagaactcaatt 124
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 265 gcctccagactggaaatcatctccccagttccctctgatctcaggacttggaactcaatt 324
Query: 125 atcctaccaatattttccagttctccttattacattcagcaattctactttcattagcca 184
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atccaac-aatattttccagttctccttattacattcagcaattctactttcattagcca 383
Query: 185 atcattcatggtcccagccttacctatctatcatctatctacctatccacccttccaatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atcattcatggtcccagccttacctatctatcatctatctacctatccacccttccaatc 443
Query: 245 agctctgagttgtcacaaggtctacaccctgacaggaagacacagcaccattgtgtctgc 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 agctctgagttgtcacaaggtctacaccctgacaggaagacacagcaccgttgtgtctgc 503
Query: 305 ttacacaggctttcaccagtacttcctgactgtaagaacagcccacgttgtgaaacactg 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttacacaggctttcaccagtactgcctgactgtaagaacagcccacgttgtgaaacactg 563
Query: 365 aatggccagcaaacaccgaaagtgtttgccccatttgatgatcctgtgaggaagccaaga 424
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatggccagcaaacaccgcaagtgtttgccccatttgatgatcctgtgaggaagccaaga 623
Query: 425 caaccatcgttcctttccttgttctctgccctgttagctcttcgagaagaatggctttgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caaccatcgttcctttccttgttctctgccctgttagctcttcgagaagaatggctttgg 683
Query: 485 g-gggaaaccccacacagtgctctatacagagaaggacaggatcccgagcatgcatgcca 543
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gagggaa-ccccacacagtgctctatacagagaaggacaggatcccgagcatgcatgcca 742
Query: 544 agtgaatctgattgatactctagacaggaaggagtggagtcgctcaggaaagcatgtgga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agtgaatctgattgatactctagacaggaaggagtggagtcgctcaggaaagcatgtgga 802
Query: 604 tctttcctatccaggtagccataagacctggcacagaaatcagcttacccagtcatgagc 663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 803 tctttcctatccaggtagccataagacctggcacagaaatcagcttacccagtcataagc 862
Query: 664 ccttatggtcacaggctaaagagcaaatagcaataccat 702
|||||||||||||||||||||||||| |||| ||||||
Sbjct: 863 tcttatggtcacaggctaaagagcaaaaagcagtaccat 901
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1101
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1091
Effective search space: 754972
Effective search space used: 754972
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no528_e08.g1 MSMg01no528_e08.g1 CHROMAT_FILE:
MSMg01no528_e08.g1 PHD_FILE: MSMg01no528_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:49 2005
(304 letters)
>mm_chr13_46514918_46515620
Length = 703
Score = 545 bits (282), Expect = e-159
Identities = 297/302 (98%), Gaps = 1/302 (0%)
Strand = Plus / Minus
Query: 1 ttcgcgcggagatttaccctttacattcccaccggggccccagaggtactgtgggcttta 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttcgcgcggagatttaccttttacattcccaccggggccccagaggtactgtgggcttta 413
Query: 61 aacaaagtccagccccaaaccagctggttactccccagcgacaatagcgattgccctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aacaaagtccagccccaaaccagctggttactccccagcgacaatagcgattgccctgct 353
Query: 121 cctgggctctcagctctttgggctgctgaattcgcccctttaaatctccaggaagcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cctgggctctcagctctttgggctgctgaattcgcccctttaaatctccaggaagcttaa 293
Query: 181 tgtgctgtttcagttaggcaaacacccagaggtgcagctttttcttttccttttagaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgtgctgtttcagttaggcaaacacccagaggtgcagctttttcttttccttttagaatc 233
Query: 241 tacctttgttaatttaaaagatagtgatgtaaagtgtgtgtgtgtgtgtgtatgtgtgtg 300
|||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 232 tacctttg-caatttaaaagatagtgatgtaaagtgtgtgtgtgtgtatgtgtgtgtgtg 174
Query: 301 tg 302
||
Sbjct: 173 tg 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 703
Length adjustment: 9
Effective length of query: 295
Effective length of database: 694
Effective search space: 204730
Effective search space used: 204730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
