NNTTTACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTAGTATGGTCGAATTTACTTCAATTCCTGTATTGGTGTAA
TTACAAAATAATGGCTCCCAAGGTGACATTTTCATAGATATGCACAAACT
ATGCTGACAATATTTACCTATCATTAGCCTCTCTGGTCTCTCTTACTACT
TCTCTAAGGAAGCAAATCTGGCCTGCATAAGAAAGCCACTGGAGCCTGAG
TCTGGCATTGAGCCAAAAGGCAGCCCACCCTCAGCATTCCATCAAGGCTT
CTGTTTACAGCTCCTGCCATGACTTTCCTCACTGATACATTGTGATCTGG
GGGTGTAAGCAAAAAACACAAACACAGAAACGAAACAAAACAAAACAAAA
ACCCCAATCTTTCCTTCCTAAGCTGCTTTTGCTCAGAGTTTCCTCAGAGC
AGCAGAATGGATGCAGGCCAGTCACCTTTTACCTTCCTGTCTGGTTTCCA
AATGGAGATTCTACAAATGGGAGAAAATGTGTGATCTCTGGATTTTTGGA
ATAACGCTTAGCCTGGAGATAGAACCACACATTTTTTTATAGAAACAAAG
TGATTTCATTTTTTCTTTGCAACTGCATAATATACCACTGTGTATATACG
CTACGTTGTCTTTATCCATTCAGCTACCGAGGGACACCCAGACCTAGCTG
CTGCGATTGTGCTGTTAGAAACCTGGCTCGGCAGAGTCTTTAGTG

AAAGGACCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCC
ATTTTTAATAGGGTTATTTGGTTCTCTAGAGGCTAACTTCTTGAGGTTTT
TTTTTTTTATATATATTGGATATTAGCCCTCTATCAGATATAGGGTTGGC
AAAGATCTTTTCCCAATCTGTTGGTTGCCATTTTGTCCTATTGACAGTGT
CCTTTGCCTTACAGAAGCTTTGCAATTTTATGAGCTCCCATTTGTCAATT
CTTGATCTTAGAGCATAAGCTATTTGTGTTCTGGTCAGGAAATTTTCCCC
TGTGCCCATGTACTCGAGACTCTTCCCCACTTTCTGTTCTATTAGTTTTA
GTATATCTCGTTTTATGTGGAGGTCCCTGATCCACTTGGAATTGAGCTTT
TTACAAGGAGATAGGAATGGGTCAATTTGCATTCTTTTGCATGCTAACCA
CCAGTTGAACCAGCACCATTTTTTGAAAATGCTGTCTTTTTCCCACTGGA
CGGTTTTAGCTCCTTTGCCAAAGATCAAGTGACCTTAGGTGTGAGGATTC
ATTTCTGGGACTTCAATTCTATTCCATTTATCTACCAGTCTGTCACTATA
CCAATACTGTGCACTTTTAATCACTATTGCTCTGTAGGTCCAGGTTGCTA
ATTCCCCCAGAGGTTCTTTTATTGATAAGAATCGTTTTN

Query= MSMg01no528_h19.b1 MSMg01no528_h19.b1 CHROMAT_FILE:
MSMg01no528_h19.b1 PHD_FILE: MSMg01no528_h19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:06 2005
         (695 letters)



>mm_chr13_111389455_111390548
          Length = 1094

 Score = 1278 bits (661), Expect = 0.0
 Identities = 685/693 (98%), Gaps = 4/693 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctagtatggtcgaatttacttcaattcctgtattggtgtaattacaaaataatg 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagtatggt-gaatttacttcaattcctgtattggtgtaattacaaaataatg 262

                                                                       
Query: 64  gctcccaaggtgacattttcatagatatgcacaaactatgctgacaatatttacctatca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gctcccaaggtgacattttcatagatatgcacaaactatgctgacaatatttacctatca 322

                                                                       
Query: 124 ttagcctctctggtctctcttactacttctctaaggaagcaaatctggcctgcataagaa 183
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 323 ttagcctctctggtctctcttactacttctctaaggaagcaagtctggcctgcataagaa 382

                                                                       
Query: 184 agccac-tggagcctgagtctggcattgagccaaaaggcagcccaccctcagcattccat 242
           |||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agccacctg-agactgagtctggcattgagccaaaaggcagcccaccctcagcattccat 441

                                                                       
Query: 243 caaggcttctgtttacagctcctgccatgactttcctcactgatacattgtgatctgggg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caaggcttctgtttacagctcctgccatgactttcctcactgatacattgtgatctgggg 501

                                                                       
Query: 303 gtgtaagcaaaaaacacaaacacagaaacgaaacaaaacaaaacaaaaaccccaatcttt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtgtaagcaaaaaacacaaacacagaaacgaaacaaaacaaaacaaaaaccccaatcttt 561

                                                                       
Query: 363 ccttcctaagctgcttttgctcagagtttcctcagagcagcagaatggatgcaggccagt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccttcctaagctgcttttgctcagagtttcctcagagcagcagaatggatgcaggccagt 621

                                                                       
Query: 423 caccttttaccttcctgtctggtttccaaatggagattctacaaatgggagaaaatgtgt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 caccttttaccttcctgtctggtttccaaatggagattctacaaatgggagaaaatgtgt 681

                                                                       
Query: 483 gatctctggatttttggaataacgcttagcctggagatagaaccacacatttttttatag 542
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 682 gatctctggatttttggaataaggcttagcctggagatagaaccacacatttttt-atag 740

                                                                       
Query: 543 aaacaaagtgatttcattttttctttgcaactgcataatataccactgtgtatatacgct 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaacaaagtgatttcattttttctttgcaactgcataatataccactgtgtatatacgct 800

                                                                       
Query: 603 acgttgtctttatccattcagctaccgagggacacccagacctagctgctgcgattgtgc 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acgttgtctttatccattcagctaccgagggacacccagacctagctgctgcgattgtgc 860

                                            
Query: 663 tgttagaaacctggctcggcagagtctttagtg 695
           |||||||||||||||||||| ||||||||||||
Sbjct: 861 tgttagaaacctggctcggcggagtctttagtg 893


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1094
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1084
Effective search space:   742540
Effective search space used:   742540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)