Query= MSMg01no528_m16.b1 MSMg01no528_m16.b1 CHROMAT_FILE:
MSMg01no528_m16.b1 PHD_FILE: MSMg01no528_m16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:29 2005
(537 letters)
>mm_chr13_46804960_46805896
Length = 937
Score = 1033 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 4 ggaattctttttgcatcctgttaacattacaataacaaaaaaaagttagcaacaaaatta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttttgcatcctgttaacattacaataacaaaaaaaagttagcaacaaaatta 263
Query: 64 agactttttcactaaattcaaattttgctgcattacatctcatgatttcaaactttaccg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agactttttcactaaattcaaattttgctgcattacatctcatgatttcaaactttaccg 323
Query: 124 caagagggctcgacatcttttctaatgactgcagtatccgccgtgctgttgagctggtca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caagagggctcgacatcttttctaatgactgcagtatccgccgtgctgttgagctggtca 383
Query: 184 caccataagactgtgcattgagctgcttagctttcatctgtcttctaactggagcctaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caccataagactgtgcattgagctgcttagctttcatctgtcttctaactggagcctaga 443
Query: 244 aaataaaagtctgtgttacttgctgcaacatatactccaaggtacgtatgtcatgcaatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaataaaagtctgtgttacttgctgcaacatatactccaaggtacgtatgtcatgcaatg 503
Query: 304 aaaaacaaatattcaaaataaaataagattatgttaacagtgacctacttatcagagagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaaacaaatattcaaaataaaataagattatgttaacagtgacctacttatcagagagg 563
Query: 364 acataggctatgcaattactgaaacctaattctcttgacaattgaattaatttaaaaatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acataggctatgcaattactgaaacctaattctcttgacaattgaattaatttaaaaatc 623
Query: 424 agaagtggaaaaaaaaaaacaaaatgcacttgttttagggttttattgctgtgaagagac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agaagtggaaaaaaaaaaacaaaatgcacttgttttagggttttattgctgtgaagagac 683
Query: 484 atcatcatagcaactcttataaaggaaaacatttaagtagggctggcttacagt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atcatcatagcaactcttataaaggaaaacatttaagtagggctggcttacagt 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_m16.g1 MSMg01no528_m16.g1 CHROMAT_FILE:
MSMg01no528_m16.g1 PHD_FILE: MSMg01no528_m16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:30 2005
(359 letters)
>mm_chr13_46943251_46944009
Length = 759
Score = 530 bits (274), Expect = e-155
Identities = 337/366 (92%), Gaps = 19/366 (5%)
Strand = Plus / Minus
Query: 1 cagataaacaggagtttttatatgagttcactactgtaggacagttgcccccaaaacaac 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cagataaacaggagtttt--tatgagttcactactgtaggacagttgcccccaaaacaac 663
Query: 61 tcccgctttccccatcagacgatagggagcct-ccctcatcctccctgagcaggaccccc 119
||| | |||||| |||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 662 tccagttttccctatcagacgatagtgagcctaccctcatcctccctgagcaggacccct 603
Query: 120 gccc------ccccccagtgccccgtcccccccccatgcccccacccccgcccgattcac 173
|||| ||| || ||||| |||||||| ||||| ||||| ||||||||||
Sbjct: 602 gcccgtgtgtcccgcc----ccccg--cccccccc---ccccc-cccccacccgattcac 553
Query: 174 ctctctggagcgcattcttaatctttatattttgttcttccattcaggtgtttgcctttg 233
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctctctggagcgcattcttaagctttatattttgttcttccattcaggtgtttgcctttg 493
Query: 234 attattgtttttggtccatggatgaatcgaacacaacaaaatatgctggtaagttggcag 293
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 492 attattgcttttggtccatggatgaatcgaacacaacaaaatatgctggtaagttggctg 433
Query: 294 ttccctctgggcttccggcctttcccgctgtgtctgttttctctaattatcccggagttt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttccctctgggcttccggcctttcccgctgtgtctgttttctctaattatcccggagttt 373
Query: 354 ccctgt 359
||||||
Sbjct: 372 ccctgt 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
