Query= MSMg01no528_p14.b1 MSMg01no528_p14.b1 CHROMAT_FILE:
MSMg01no528_p14.b1 PHD_FILE: MSMg01no528_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:45 2005
(681 letters)
>mm_chr13_101125509_101126589
Length = 1081
Score = 1265 bits (654), Expect = 0.0
Identities = 672/678 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctgtgtatcgaagggtaacacttcgtcctcctttctccacttcccaagtgaaa 63
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgtgtatccaagggcaacacttcgtcctcctttctccacttcccaagtgaaa 263
Query: 64 ggagcctccacacacccctggcttcaaaatcattcttttttctattctaggactctaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggagcctccacacacccctggcttcaaaatcattcttttttctattctaggactctaaaa 323
Query: 124 gtcttaccacacatagttttgttcagagctgaagacctctttgtgtctattaggggaatg 183
|| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtataaccacacatagttttgatcagagctgaagacctctttgtgtctattaggggaatg 383
Query: 184 tctagtagctgaacttcaatccttccgcttacaatgtcaactgcacatctaacaaaaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctagtagctgaacttcaatccttccgcttacaatgtcaactgcacatctaacaaaaagc 443
Query: 244 tgatatcaaaaatctataaacaactcaggaaactagacaagagtaaaccaaatcaatcaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgatatcaaaaatctataaacaactcaggaaactagacaagagtaaaccaaatcaatcaa 503
Query: 304 ttttaaaatggagtacagagaaatctcaacagagaaaccgctaaagtcttagaagcactt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttttaaaatggagtacagagaaatctcaacagagaaaccgctaaagtcttagaagcactt 563
Query: 364 aaggaaatatttaacatccttagaaatcaggcaaatgcaaatcaaaacaactctgagatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaggaaatatttaacatccttagaaatcaggcaaatgcaaatcaaaacaactctgagatt 623
Query: 424 caacctcctgagatcaaatactcaagcaacagcttatgctaatgaggatattgaaaaggg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caacctcctgagatcaaatactcaagcaacagcttatgctaatgaggatattgaaaaggg 683
Query: 484 ggaacacttcttcattactggtgtgaatgcaaacttgtacagtcgcttggaaaatcaatt 543
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 684 ggaacacttcttcattactggtgtgaatgcaaacttgtacagtcacttggaaaatcaatt 743
Query: 544 tggcagtttctcagataattaggaatatatctacctcaagaccatgatatatacccaaag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tggcagtttctcagataattaggaatatatctacctcaagaccatgatatatacccaaag 803
Query: 604 gatgctccatcatatcaaaaggacacttgatcaaccatgaagctttattcatattagcta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gatgctccatcatatcaaaaggacacttgatcaaccatgaagctttattcatattagcta 863
Query: 664 gaaactagaaataaccta 681
||||||||||||||||||
Sbjct: 864 gaaactagaaataaccta 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_p14.g1 MSMg01no528_p14.g1 CHROMAT_FILE:
MSMg01no528_p14.g1 PHD_FILE: MSMg01no528_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:45 2005
(500 letters)
>mm_chr13_101294860_101295763
Length = 904
Score = 702 bits (363), Expect = 0.0
Identities = 396/413 (95%), Gaps = 12/413 (2%)
Strand = Plus / Minus
Query: 96 cagtgttcttttaaagccattccattgaagtacgagtgacagggcttttcagtttttac- 154
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 704 cagtgttcttttaaagccattccattgaagtatgagtgacagggcttttcagtttttacg 645
Query: 155 ctcttagattctcctgtccattcctttgtggtttctgttgcttctggtctagactgtctt 214
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 644 ctcttagattctcctgtccattcctttgtggtttctgttgtttctggtctagactgtctt 585
Query: 215 cttgctgtgctctgtgaggttggtacccagtacatactagacaagcaccgtacaccaagc 274
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 584 cttgctgtgctctgtgaggttgggacccagtacatactagacaagcaccgtacaccaagc 525
Query: 275 cattccctagtctctgcaactcactttcaattacagtatgaaataagtcctaacttaact 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cattccctagtctctgcaactcactttcaattacagtatgaaataagtcctaacttaact 465
Query: 335 tgccccaacgtgaccttgcactgactgaacttgtatctcctaagagccatccccca---- 390
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgccccaatgtgaccttgcactgactgaacttgtatctcctaagagccatcccccacccc 405
Query: 391 ---ccccttttttttttttttttggtaaaggttgacttcttctgttctttccttttatca 447
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 caccccc----ttttttttttttggtaaaggttgacttcttctgttctttccttttatca 349
Query: 448 acacatttgaccagagcaattatgtaaaaggccaacaaaccaatttttcatag 500
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 348 acacatttgaccagagcaattatgtaaaaggccaacaaaccaatttctcatag 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 904
Length adjustment: 10
Effective length of query: 490
Effective length of database: 894
Effective search space: 438060
Effective search space used: 438060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
