NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATTAAAATAGCTACCCTTTATAGAATGAATATAAAATATTA
CTATATCTCTACTTATGGAAAGCATTTGTCAACAATTAATAAAGTTTCTT
ATTTATACTCCTGTAAAATTCCAAGCAATCATATTTGTATCCTAACATTT
TTATCAGAAGGATTTTGCTATAAATCAGCTTTGGCTTTCAGTTTACTCTG
TTACAATTCTTAATTTAGTTATATTGAAAGAATTTTTCTAATTTCTGAAA
CTAGACTAACCTGCTGACACAAAGCTGCTCATGGTATTTCTTCATTATCA
TTTTTATTAGTGTTACTGACATTGAATATTTTAGATACATGATTTTTTTT
TCCCAGAAGTTGGAAAGAACCCAGATGTCCCTAACCAGAGGAATGGATAC
AGAAAATGTGGTACATTTTTACAATGAAGTAATACTCAGCAATTAAAAAC
AATGAATTCATGAATTTCTTAGACAAATGGATGGATCTGGAGTATATCAG
CCTGAGAGACGTAACCCAATCACGAAAGAACACACATGATATGCACTCAC
TAATAAGTGGATATTAGCCAAGAATCTCAAAATACCCAAGATACAAATTC
ACAAACTACATGAAACTCTAGAATAAGGAAGACCAAAGTGTGAGCACTTC
ATTCCTTCTTACAATGGGGAACAAAATACCCATGGAAGGAGTTACN

NNNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTCGCACCTACACAC
GATTGCTCACAGCACGTACAGGCTCTCCACAATTTACCACAATCGTTGAA
TATATTTTGAAGTTGGAGGGGCGGGATCATATGAGGCCCCATAATACAAC
TTCCAATTCCAGAAACTTCAGTTAGGGTAATTTGTATGGACTCAAAGAGT
AATTGTTCTGCATCATTAAGAAGAGTAAAATTATTGAACAGGGCTATTCC
CTCATAGAAGGGAGGGGTGGCGGAGAAACACATCCAACACTCCTCAAAAC
CAGGGGAACCATCCTCCTGTCTTTTATCTATTAGGGCGAGGGCTGAGGCA
TTTAAAATGGGAAGCAATAATTCAGTAGACGGCTTAGGGCCAGGAAGCAT
GGTAGGCTGATAAGGAGTGCTCATCTGAACATGTGGGGTAATTGATTCCA
CTGTGGAGGGGGGCAACCTAGCTGTTGGCTGTGGCTTGGCTGGGGGGGTG
ATGGTAATTGGGGGTTGAGTCCTATCGATGCCTTATGTTTATTAGGAACT
TCTTTTAGGAGTCGTAGTATAAATATAACTCCTGCGTCCCAATCATTCTT
ATAAAGGTGTAGCCCCCAGGTTAGGGGGCGATTAAATTGTTGCCAAGAGA
ACTGTTTTCCCTTAAAGGTAAAGCTGATGGAAATAGGGTTACACCAC

Query= MSMg01no532_e14.b1 MSMg01no532_e14.b1 CHROMAT_FILE:
MSMg01no532_e14.b1 PHD_FILE: MSMg01no532_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:10 2005
         (619 letters)



>mm_chr13_87704498_87705517
          Length = 1020

 Score = 1077 bits (557), Expect = 0.0
 Identities = 602/617 (97%), Gaps = 3/617 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattaaaatagctaccctttatagaatgaatataaaa-tattactatatctctac 63
           |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattcattaaaatagttaccctttatagaatgaatataaaaatattactatatctctac 264

                                                                       
Query: 64  ttatggaaagcatttgtcaacaattaataaagtttcttatttatactcctgtaaaattcc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttatggaaagcatttgtcaacaattaataaagtttcttatttatactcctgtaaaattcc 324

                                                                       
Query: 124 aagcaatcatatttgtatcctaacatttttatcagaaggattttgctataaatcagcttt 183
           | ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||
Sbjct: 325 aggcaatcatatttgtatcctaacatttttatccgaaggatttagttataaatcagcttt 384

                                                                       
Query: 184 ggctttcagtttactctgttacaattcttaatttagttatattgaaagaatttttctaat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggctttcagtttactctgttacaattcttaatttagttatattgaaagaatttttctaat 444

                                                                       
Query: 244 ttctgaaactagactaacctgctgacacaaagctgctcatggtatttcttcattatcatt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttctgaaactagactaacctgctgacacaaagctgctcatggtatttcttcattatcatt 504

                                                                       
Query: 304 tttattagtgttactgacattgaatattttagatacatgatttttttttcccagaagttg 363
           | |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 tgtattagtgttactgacgttgaatattttagatacatgatttttttt-cccagaagttg 563

                                                                       
Query: 364 gaaagaacccagatgtccctaaccagaggaatggatacagaaaatgtggtacatttttac 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaaagaacccagatgtccctaaccagaggaatggatacagaaaatgtggtacatttttac 623

                                                                       
Query: 424 aatgaagtaatactcagcaattaaaaacaatgaa-ttcatgaatttcttagacaaatgga 482
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 624 aatgaagtaatactcagcaattaaaaacaatgaaattcatgaatttcttagacaaatgga 683

                                                                       
Query: 483 tggatctggagtatatcagcctgagagacgtaacccaatcacgaaagaacacacatgata 542
           || ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 684 tgtatctggagtatatcagcctgagagttgtaacccaatcacgaaagaacacacatgata 743

                                                                       
Query: 543 tgcactcactaataagtggatattagccaagaatctcaaaatacccaagatacaaattca 602
           |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 744 tgcactcactgataagtggatattagcccagaatctcaaaatacccaagatacaaattca 803

                            
Query: 603 caaactacatgaaactc 619
           |||||||||||||||||
Sbjct: 804 caaactacatgaaactc 820


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1020
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1010
Effective search space:   615090
Effective search space used:   615090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)