Query= MSMg01no532_n16.b1 MSMg01no532_n16.b1 CHROMAT_FILE:
MSMg01no532_n16.b1 PHD_FILE: MSMg01no532_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:54 2005
(657 letters)
>mm_chr13_49533484_49534539
Length = 1056
Score = 1205 bits (623), Expect = 0.0
Identities = 651/661 (98%), Gaps = 7/661 (1%)
Strand = Plus / Plus
Query: 1 gatgatttacagctaggagtttaagcatgtactacacc--gttcctgtccttggctttga 58
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 199 gatgatttacagctaggagtttaagcatgtactacacccagttcctgtccttggctttga 258
Query: 59 cagtcctggtgtgggtatgttggaatttatcttaacagttatggcttatctcctgtttac 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cagtcctggtgtgggtatgttggaatttatcttaacagttatggcttatctcctgtttac 318
Query: 119 tcaacagagctactgacctttctagttactcttcatttgagttacgtttttcaagtacat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcaacagagctactgacctttctagttactcttcatttgagttacgtttttcaagtacat 378
Query: 179 acttatttagttattaaatatatattaaatgatgttggggttgtatctgtgtggatatgt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acttatttagttattaaatatatattaaatgatgttggggttgtatctgtgtggatatgt 438
Query: 239 gtatgagatgtgcagacccacatg-agggcaaaacacccattccataacatttttttttt 297
|||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||
Sbjct: 439 gtatgagatgtgcagacccacatgca-ggcaaaacacccattccataaca-ttttttttt 496
Query: 298 cagaaggtaaaaag-ttttaaaatttgttctttgataactttatatgtaaataaataaca 356
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 497 cagaaggtaaaaagtttttaaaatttgttctttgataagtttatatgtaaataaataaca 556
Query: 357 tatactggtcatctgtattctcttatcctatctccaacccctttaaattgttactgttat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tatactggtcatctgtattctcttatcctatctccaacccctttaaattgttactgttat 616
Query: 417 taagtaatgtattatttacatatgtgtatatgtgtgcattgtgcaaagctcctgagtgag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 taagtaatgtattatttacatatgtgtatatgtgtgcattgtgcaaagctcctgagtgag 676
Query: 477 gaagccaaaggactacttgtgggagtcacttctctgcctcgctgaggccaggtttgctct 536
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 677 gaagccaaaggactacttgtgggagtcacttctctgccttgctgaggccaggtttgctct 736
Query: 537 tgtttctgccaggtgcttattctagtcaggctggatcgcaagcttccaggagagtctctc 596
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgtttctgccagatgcttattctagtcaggctggatcgcaagcttccaggagagtctctc 796
Query: 597 attcctgcctcccatcttgccacagaagtgctagaattatattcagntttttttgcttgg 656
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 797 attcctgcctcccatcttgccacagaagtgctagaattatattcag-tttttttgcttgg 855
Query: 657 g 657
|
Sbjct: 856 g 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space: 676762
Effective search space used: 676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_n16.g1 MSMg01no532_n16.g1 CHROMAT_FILE:
MSMg01no532_n16.g1 PHD_FILE: MSMg01no532_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:54 2005
(156 letters)
>mm_chr13_49605176_49605733
Length = 558
Score = 255 bits (132), Expect = 7e-73
Identities = 151/158 (95%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 1 ctcatctttctgcctctccactccaagtactggggttgcaggtatttatatcccatggca 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 358 ctcatctttctgcctctccactccaagtactggggttacaggtatttatatcccatggca 299
Query: 61 ggctactttaatattcttagtcatacatcttctggaagcatttttatggtttttttttt- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggctactttaatattcttagtcatacatcttctggaagcatttttatggttttttttttt 239
Query: 120 -gtttttttgatttttttgggggggggggggtttgaga 156
||||||||||||||||| ||||||| |||||||||
Sbjct: 238 tgtttttttgattttttttttgggggggtggtttgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 558
Length adjustment: 8
Effective length of query: 148
Effective length of database: 550
Effective search space: 81400
Effective search space used: 81400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
