Query= MSMg01no534_l17.b1 MSMg01no534_l17.b1 CHROMAT_FILE:
MSMg01no534_l17.b1 PHD_FILE: MSMg01no534_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:21 2005
(650 letters)
>mm_chr13_58786815_58787863
Length = 1049
Score = 1143 bits (591), Expect = 0.0
Identities = 633/647 (97%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 4 ggaattccccaagaagtcgtggaaggcccagcgtctagacctacttagattataataaac 63
|||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||
Sbjct: 204 ggaattccccaagaagccgtggaaggcccagcatctagacctacttagactacaataaac 263
Query: 64 tattcatctgtttctagccagtcagcattcccctgataacacaattatgtttatactgtg 123
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 tattcatctgttgctagccagtcagcattcccctgataacacaattatgtttataccgtg 323
Query: 124 gtgttccagcaaatacattttagacccctctagtcaaccacaggacaatagtcttgaacc 183
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtattccagcaaatacattttagacccctctagtcaaccacaggacaatagtcttgaacc 383
Query: 184 acaagataagaaccacaagacataacttttcaagtaggtgatttttaaatttaattctat 243
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaagataagaaccaca-gacataacttttcaagtaggtgatttttaaatttaattctat 442
Query: 244 tcacatcaatctctgctttcatggcactatggctgggattgggaaccacggcctttgcct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcacatcaatctctgctttcatggcactatggctgggattgggaaccacggcctttgcct 502
Query: 304 ggggtgtgtgtatgtggcaacattctgccccatggacaggtggtatccatagagaactaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggggtgtgtgtatgtggcaacattctgccccatggacaggtggtatccatagagaactaa 562
Query: 364 aaaccaaaacaaatgctggcttgctttgcatcgtcacatgtgcggatgacaacgccggtg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 563 aaaccaaaacaaatgctggcttgctttgcatcgtcacatgtgcggatgacaacgccagtg 622
Query: 424 atgaacgcttgaacagagagcatctccgttaatccagagcagtggttcccaactatcctg 483
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atgaatgcttgaacagagagcatctccgttaatccagagcagtggttcccaactatcctg 682
Query: 484 atgctgcgatcctttaataaggttcatctctttctgctgaccccaaccatagctttattt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atgctgcgatcctttaataaggttcatctctttctgctgaccccaaccatagctttattt 742
Query: 544 gtgttgctacctcatacctctaattttgtagcagttaggaatcatcatgtaaatattttt 603
||||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||
Sbjct: 743 gtgttgctaccccatacctctaattttgcagca-ttaggaaccatcatgtaaatattttt 801
Query: 604 ggagatagaggtttgacaaaaggggttgtaacccacaggttgagaac 650
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ggagatagaggtttgacaaaaggggttgtaacccacaggttgagaac 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1049
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1039
Effective search space: 664960
Effective search space used: 664960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_l17.g1 MSMg01no534_l17.g1 CHROMAT_FILE:
MSMg01no534_l17.g1 PHD_FILE: MSMg01no534_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:21 2005
(616 letters)
>mm_chr13_58970019_58971034
Length = 1016
Score = 1176 bits (608), Expect = 0.0
Identities = 614/616 (99%)
Strand = Plus / Minus
Query: 1 aacacagcaggattttgtgtaggatcatgaatcaacagttagaccacaacctagaagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aacacagcaggattttgtgtaggatcatgaatcaacagttagaccacaacctagaagaca 614
Query: 61 attcacttttccagacccatcatgtctttgctatcaagatcgaccacaaaacatcaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 attcacttttccagacccatcatgtctttgctatcaagatcgaccacaaaacatcaggtt 554
Query: 121 gggccatactcaaacttgctgaaaaacaatattatttttctgacttccttttcccaggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gggccatactcaaacttgctgaaaaacaatattatttttctgacttccttttcccaggta 494
Query: 181 tgagagaagagtcggctctgtgtctccaccttcagtcgtacaggtcaggatgggatgatg 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgagagaagagtcggctcggtgtctccaccttcagtcgtacaggtcaggatgggatgatg 434
Query: 241 ggactgggcagagagacattgcgacagcaacaatcaccgctgtggtttttgtccctccca 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggactgggcagagagacagtgcgacagcaacaatcaccgctgtggtttttgtccctccca 374
Query: 301 tacacatgcaaccagacctaatgcatcccatgccacaacacagaagtgggcatgtgaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tacacatgcaaccagacctaatgcatcccatgccacaacacagaagtgggcatgtgaaac 314
Query: 361 gcatggacccaagttcacaaagcacagggacagacacgaaagtaagacaacaattcctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gcatggacccaagttcacaaagcacagggacagacacgaaagtaagacaacaattcctct 254
Query: 421 ttacacttctgaccatggccaaattttaaaaacattccactttttttctcctatgatata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttacacttctgaccatggccaaattttaaaaacattccactttttttctcctatgatata 194
Query: 481 gattcccactctatatctctagctgacctgcaacttgctaggtaggtcaagctagccttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gattcccactctatatctctagctgacctgcaacttgctaggtaggtcaagctagccttg 134
Query: 541 aacttacagagatctacctgcctctgcctcctgggggctgggattaaaagcacacacagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aacttacagagatctacctgcctctgcctcctgggggctgggattaaaagcacacacagc 74
Query: 601 caaacctgggtatccc 616
||||||||||||||||
Sbjct: 73 caaacctgggtatccc 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
