Query= MSMg01no537_n21.b1 MSMg01no537_n21.b1 CHROMAT_FILE:
MSMg01no537_n21.b1 PHD_FILE: MSMg01no537_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:21 2005
(563 letters)
>mm_chr13_45846105_45847067
Length = 963
Score = 1052 bits (544), Expect = 0.0
Identities = 556/560 (99%)
Strand = Plus / Minus
Query: 4 ggaattcagcaatgggccacgaattcacttggaggtataagatcagccatgagtcagcac 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ggaattcagcaatgggccaggaattcacttggaggtataagatcagccatgagtcagcac 704
Query: 64 ttcactgactgatgctgagtcagcactcccctgatgctgagtcagcacttccctgatgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ttcactgactgatgctgagtcagcactcccctgatgctgagtcagcacttccctgatgct 644
Query: 124 gggtaagggatatttggccttccattgcgaagctttgtttgaaatttcccatgaactaat 183
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 643 gggtaagggatatttggccttccattgtgaagctttgtttgaaatttcctatgaactaat 584
Query: 184 gctaggtttctcaaatgcgcctccaattcttccctggctcctcttccccttgactctatt 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 583 gctaggtttctcaaatgcgcctccaattcttccctggctcctcttccctttgactctatt 524
Query: 244 gttcagtaagtgactcattcctctgaaaggaagctagcccttcccttctgtctgagccta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gttcagtaagtgactcattcctctgaaaggaagctagcccttcccttctgtctgagccta 464
Query: 304 ataaatatactccaggaggcctcctaataccgtgcctcattttttatttcttagcagatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ataaatatactccaggaggcctcctaataccgtgcctcattttttatttcttagcagatc 404
Query: 364 atatgatggatggctgtacttttataataaattcaaaagcctcccctcagtcctcaccag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atatgatggatggctgtacttttataataaattcaaaagcctcccctcagtcctcaccag 344
Query: 424 tttgaattgcacaaaagaacatgaagataagagtgctttaaaataaatctcagctaatta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tttgaattgcacaaaagaacatgaagataagagtgctttaaaataaatctcagctaatta 284
Query: 484 tacatacaaccgcattcactaagtgggaatattttcaggcctttctatgctaccctgtgc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tacatacaaccgcattcactaagtgggaatattttcaggcctttctatgctaccctgtgc 224
Query: 544 cacctgctcccaatgtaaat 563
||||||||||||||||||||
Sbjct: 223 cacctgctcccaatgtaaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_n21.g1 MSMg01no537_n21.g1 CHROMAT_FILE:
MSMg01no537_n21.g1 PHD_FILE: MSMg01no537_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:21 2005
(587 letters)
>mm_chr13_45724885_45725872
Length = 988
Score = 1083 bits (560), Expect = 0.0
Identities = 581/588 (98%), Gaps = 1/588 (0%)
Strand = Plus / Plus
Query: 1 atagccactatgcctcaagctctccatatcaagatccaggtcagaaacttctatctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagccactatgcctcaagctctccatatcaagatccaggtcagaaacttctatctctca 260
Query: 61 gcctccagattaggatcactggtgagccttccagttctggattgtagttcattacagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctccagattaggatcactggtgagccttccagttctggattgtagttcattacagata 320
Query: 121 tagtcaagttgacaaccagagatagccactacagctatgtaagaggtcctttatttggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtcaagttgacaaccagagatagccactacagctatgtaagaggtcctttatttggaa 380
Query: 181 atcctcctgcccctgcacagtgagatagctttctctggggactctgttccttgattttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcctcctgcccctgcacagtgagatagctttctctggggactctgttccttgattttat 440
Query: 241 ctttctaccaattttcctggtcagttggctccatattgagaacaattaacggatgctaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttctaccaattttcctggtcagttggctccatattgagaacaattaacggatgctaag 500
Query: 301 ctgtgtaagggtagtggaggaggctgacattaatgaaggcttgggtcagaaggacccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 501 ctgtgtaagggtagtggaggaggctgacattaatgaaggcttgggtcagaagggctcaag 560
Query: 361 gctcaactcctgttccctggtctctctgtcatttgacaggagcctctaaaaaccctccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctcaactcctgttccctggtctctctgtcatttgacaggagcctctaaaaaccctccta 620
Query: 421 gctcactggccactggacctgtatctcctttactccttccccctttgcaagtgtgaagct 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctccctggccactggacctgtatctcctttactccttccccctttgcaagtgtgaagct 680
Query: 481 gaccttactctgttatttttt-gtttgtttgtttggttggttggttttggtttttcgaga 539
||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 681 gaccttactctgttatttttttgtttgtttgtttgtttgtttgtttttggtttttcgaga 740
Query: 540 cagggtttctctgtgtagccctggctgtcctggaactcactctgtaga 587
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagggtttctctgtgtagccctggctgtcctggaactcactctgtaga 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 988
Length adjustment: 10
Effective length of query: 577
Effective length of database: 978
Effective search space: 564306
Effective search space used: 564306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
