GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACCTTC
TATTATGAAATCAGTTCTGCTAATGTCTGGGTGCCTACTAAGGTTTTGGG
TTTCTGTTATACCCATTATCTATATTTTTTTTTCATTCACGTGGCCATTC
CACTTGTATCTTCAGGTTATGCTCCCATTTCAGAATCTCTGCATGTGTTT
CTCCTTCTGGAACCTCCCTCTCCAGTATTTTCATGACTCATTTCTCAAAT
GATATCTTTACAAAAAAATAGTCCTCTGGTCAGGCTTTTTACATGGCAAA
CATCTACCCACACACTAGAGCACACTGATATTTTTCTTTACCCACTTTAT
TTTTTCCATGGCACCTATGAGTTTATAATAAATCATAAAGTTATGTATTA
TGATTACGATTTTCCTTCCTGTTAAGAATGCAAGGTCNNCAGCCGGGCGT
GGTGGTGCACGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGGTGTAT
TTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAATTCCAGGATAGCCA
GGGCTATACAGAGAAACCCTGTCTCGAAAAACAAACAAAACAAAACAAAA
CAAAAAGAATGCAAGGTCTCTTTGGCTCACTAAGTAAGAAAACATTTAGC
ACCGTAACACATAGGGCGCACTCATAAATATCCATTAAATGAAACAGCTT
GAGTAGCAGACAACCTGGGGACCTAGTACCACCTCTGCCCCCAAGACA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTG
AAAAGATGCTCAGCATCTTTAATCATCAGAGAAATGCAAATCAAAACAAC
CCTGAGATTCCATCTCACACCAGTCAAAATGGCTAAGATCAAAAATTCAG
GTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTTCTTCAT
TGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCA
GTTCCTCAGAAAATTGGTCATAGTACTACTGGAGGATCCCGCAATTCCTC
TCCTGGGCATATATCCAGAAGATGTGCCAACCGGTAAGACAGACACATGC
TCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAACCTGGAAAGA
ACCCAGATGCTCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCT
ACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTC
CTAGGCAAATGGATGGACCTGGAGGACATCATCCTGAGTGAGGTAACACA
ATCACAAAAGAACTCAAATGATATGTACTTACTGATAAGTGGATATTAGC
CCACAAACTTAGAATACCTGAGATATAAGATACAATTTTCAAAACACATG
AAACTGAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCCTCTT

Query= MSMg01no538_o14.b1 MSMg01no538_o14.b1 CHROMAT_FILE:
MSMg01no538_o14.b1 PHD_FILE: MSMg01no538_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:41 2005
         (596 letters)



>mm_chr13_119177112_119178107
          Length = 996

 Score = 1131 bits (585), Expect = 0.0
 Identities = 590/592 (99%), Gaps = 1/592 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaccttctattatgaaatcagttctgctaatgtctgggtgcctactaaggttttg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gaattcaccttctattatgaaatcagttctgctaatgtctgggtgcctactaaggttttg 544

                                                                       
Query: 65  ggtttctgttatacccattatctatatttttttttcattcacgtggccattccacttgta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggtttctgttatacccattatctatatttttttttcattcacgtggccattccacttgta 484

                                                                       
Query: 125 tcttcaggttatgctcccatttcagaatctctgcatgtgtttctccttctggaacctccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcttcaggttatgctcccatttcagaatctctgcatgtgtttctccttctggaacctccc 424

                                                                       
Query: 185 tctccagtattttcatgactcatttctcaaatgatatctttacaaaaaaatagtcctctg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tctccagtattttcatgactcatttctcaaatgatatctttacaaaaaaatagtcctctg 364

                                                                       
Query: 245 gtcaggctttttacatggcaaacatctacccacacactagagcacactgatatttttctt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gtcaggctttttacatggcaaacatctacccacacactagagcacactgatatttttctt 304

                                                                       
Query: 305 tacccactttattttttccatggcacctatgagtttataataaatcataaagttatgtat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tacccactttattttttccatggcacctatgagtttataataaatcataaagttatgtat 244

                                                                       
Query: 365 tatgattacgattttccttcctgttaagaatgcaaggtcnncagccgggcgtggtggtgc 424
           |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 243 tatgattacgattttccttcctgttaagaatgcaaggtc-tcagccgggcgtggtggtgc 185

                                                                       
Query: 425 acgcctttaatcccagcccttgggaggcagaggcaggtgtatttctgagttcgaggccag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 acgcctttaatcccagcccttgggaggcagaggcaggtgtatttctgagttcgaggccag 125

                                                                       
Query: 485 cctggtctacagagtgaattccaggatagccagggctatacagagaaaccctgtctcgaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cctggtctacagagtgaattccaggatagccagggctatacagagaaaccctgtctcgaa 65

                                                               
Query: 545 aaacaaacaaaacaaaacaaaacaaaaagaatgcaaggtctctttggctcac 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  aaacaaacaaaacaaaacaaaacaaaaagaatgcaaggtctctttggctcac 13


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space:   577796
Effective search space used:   577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)