CCAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATC
CGCGGAATTCTTAACTGTGCGATATTAAATGGCTGAGAAGCACCTAAAGA
AATGTTCAACATCCTTAGTCACCAGGGAAATGAAATAAAAACAACCCTGA
GAGTCTACCTCACACCAATCAGAATGGCTAAGATCAAAAACTCAGGTGAA
AGCAGATGCTGGTGAGGTTGGAGAAAAGGGAACACTTCTCCATTGTTGGT
GGGATTGAAAGCTGGTACAACCACTCGGAAAATCACTCTCATAGTTCCTC
AGAAAATTGGAAATAGTACTACCTGAGGACCTAGTAATACCACTCCTGGG
CATATACCCAAAAGATGTTCCAACATGTAACAAGGACACATGCTCCACTA
AGTTCATATCAGCCTTATTTGTAATAACCAGAAGCTGAAAAGAACCCAGA
TGTTTCTCACTAGAGGAATGGATACAGAAAATATGATACATTTACACAAT
GGAGTACTACTCAGCTATTAAAAACAACGAATTCATGAAATTCTTAGGCA
AATGGATGGAACTAGAAAAATATACTGAGTGAGGTAACCCAATCACAAAA
GAACACACATAGTATGCACTCACTGATAAGTGGATATTAACCCAAAGGCT
GGGAATACCCAAGATACAATTCAAAGACCACATGAAGAACAAGATGAAGA
AAGGCCGGACGTGGTGGCACACGCCTT

TTTCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTGTAAATTTTGTTGTGACC
TGTGCTCTCCCTTCTAGGTCCATACCTGATATACATTAAGAGATTGAAAT
TTGTCCTTTTGAGATACGGTATCGTGAACTCAGACATACATACACAATAT
AGATAGAAGTGTGGTTTCGACTCTTTATTTATTTGTAAATAATGATTTTA
CATGAGGAGGGAAACATGCATTTTGGAGTAGATATGCTAATTACCTGCAC
TCAGAGTTAACATTCTCAGTTTTGGCCTGTAAAAAATTACTTTTAAGTAG
CCTAAGTCGAACTAATTCCAGGTGAAGAAACTCATGTATATCAATGAATA
ATGCTTTTAGTCCCAATTAGAAGGAACGGGTGATATTTTAGGTAGCCAAG
CAAGTGCATTGAAAATACCTATATCTTAGAGGAAAGAAGACAATGTATTA
GGAGTGATGGAGCCTCCTGAAAATACAGCAAAGAAGCTAGTCCCTCTGCA
GATGTACATGGGAGCATAAAGCTAGCAGGCTGACTTGTGCTACATTGATA
GTGTATTCAGGATTGAAATCCTGGACTATTTTTCTGTAAGGATATAACTA
ATTAGTAAAACTATGTCCTGTATATATTCAGTACATATTTACACATATAT
AGTACTGCAAGTTATATATATGATACAATGT

Query= MSMg01no540_o02.g1 MSMg01no540_o02.g1 CHROMAT_FILE:
MSMg01no540_o02.g1 PHD_FILE: MSMg01no540_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:19 2005
         (625 letters)



>mm_chr13_90091522_90092546
          Length = 1025

 Score = 1193 bits (617), Expect = 0.0
 Identities = 623/625 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctttgtaaattttgttgtgacctgtgctctcccttctaggtccatacctgatatacatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ctttgtaaattttgttgtgacctgtgctctcccttctaggtccatacctgatatacatta 766

                                                                       
Query: 61  agagattgaaatttgtccttttgagatacggtatcgtgaactcagacatacatacacaat 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 765 agagattgaaatttgtccttttgagatacggtatcatgaactcagacatacatacacaat 706

                                                                       
Query: 121 atagatagaagtgtggtttcgactctttatttatttgtaaataatgattttacatgagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 atagatagaagtgtggtttcgactctttatttatttgtaaataatgattttacatgagga 646

                                                                       
Query: 181 gggaaacatgcattttggagtagatatgctaattacctgcactcagagttaacattctca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gggaaacatgcattttggagtagatatgctaattacctgcactcagagttaacattctca 586

                                                                       
Query: 241 gttttggcctgtaaaaaattacttttaagtagcctaagtcgaactaattccaggtgaaga 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gttttggcctgtaaagaattacttttaagtagcctaagtcgaactaattccaggtgaaga 526

                                                                       
Query: 301 aactcatgtatatcaatgaataatgcttttagtcccaattagaaggaacgggtgatattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aactcatgtatatcaatgaataatgcttttagtcccaattagaaggaacgggtgatattt 466

                                                                       
Query: 361 taggtagccaagcaagtgcattgaaaatacctatatcttagaggaaagaagacaatgtat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 taggtagccaagcaagtgcattgaaaatacctatatcttagaggaaagaagacaatgtat 406

                                                                       
Query: 421 taggagtgatggagcctcctgaaaatacagcaaagaagctagtccctctgcagatgtaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 taggagtgatggagcctcctgaaaatacagcaaagaagctagtccctctgcagatgtaca 346

                                                                       
Query: 481 tgggagcataaagctagcaggctgacttgtgctacattgatagtgtattcaggattgaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgggagcataaagctagcaggctgacttgtgctacattgatagtgtattcaggattgaaa 286

                                                                       
Query: 541 tcctggactatttttctgtaaggatataactaattagtaaaactatgtcctgtatatatt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tcctggactatttttctgtaaggatataactaattagtaaaactatgtcctgtatatatt 226

                                    
Query: 601 cagtacatatttacacatatatagt 625
           |||||||||||||||||||||||||
Sbjct: 225 cagtacatatttacacatatatagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)