NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTGTTTAGCTCTGTATCCCATTCTTAAATAGGGTTACTATGT
TCTCTGGAGTCTAACTTCTTCAGTTCTTTGTATATTTTGGATGTTAGCCC
TCTATCAGTTGGTAAAGATCTTTTCCCAATCTGTGAGTTGCCATTTTGTC
TTATTGACATTGTCCTTTGCCTTACAGAATCTTTGCAATTTTATGAGGTC
CCATTTGTCAATTCTTGATCTTAGAGCATAAGCCATTGGTGTTCTGTTCA
GGAAAATTTCCCCTGTGTCAATGTGTTCAAGGTTCTTTCCCACTTTCTCT
TCTATTAGATTCATAGCATCTGGTCTTATGTGGAGGTCCTTGATTTACTT
GGACTTGAGCTTTGTACAAGGAGCTAAGAATGGGTTAATTTGCATTTTTC
TACATGCTGACTGCCAGTTGAATCAGCACCATTTGTTGAAAATGCTGTCT
TTTTGCCTTTGCCAAAGATCAAGTGACCAAAGGTGTGTGGGTTCATATCT
GGGTCTTGAATTCTATTCCATTTATCTACCTGTGTGTCTCTATACCAATA
CCATGTTTTTTTGTTCTTTGTTTTTATTTTTTTCATTACTATTGCTCTGT
AGTATAGCTTGAGGTCAGGGATGGTTATTCACCCAGAAGTTCTTTTATTG
TTGAGAATGGTATTTGCTATCCTGGATTTTTTGTTATTCAGATACATTTT
TAGATTGCTCTTTCTATCT

NCGAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATGTTGCTAAATCAGTGCCAAGT
AGTCCATTTACACGTCATAGGTGATCATTAACTAGATCCATCTCTCGAAT
CCATGAGGCCAAACAGGTGTGCACTGTAGTCATCGGTCAAATGGATGTAA
ACTCGTGAATTTTGTGTCATTGAGGTTTTCTGGTGAGTGTGGTGGCTTGG
CGTGTGCATGCTTCTCCCAGACAACAGGTAGCGTCACCTCCGAAGTCATC
AGGGACTTCCCTCCGAACGCCACAATTGTGCCTCGTCCTATGGTGAATCA
CCCAAGCTTTCAGGTGTGCACAGCACACACTAGTGTTCCGGTGCGGCAGC
TGGACTTATTTATTTATTTTTGAGGGACCGATCCATTTCAGACCCTGGGA
TGGGGGGGAACTGCGAGGATGCTCCAGCCCTGCGCCTGCTCCTGGGCAGA
GTACACCAGGGAGCCGCTCTCTTTCCCCGGAGACCCAGCTGGAGGGGCTG
AGCCAGGGCCCTGCCACCCTACTTCCAACTGGATCCTACAGAAAGGTGTC
AGATTCAAGTCCTCCCATAGGTCAATTTTCTAAAAGTGCTTTCAAGTTTC
CATGGTGTTGGGTTTTTTTTTCCCCCCAGAAGGGGAGGGCAAGAGCAGCT
TTTGCGTTCAAATTCTTTTCCTTGTATGTAGACGCCAAAAGGAAGCTTCC
TACTGTGCATGTTCGGATGTG

Query= MSMg01no541_i18.g1 MSMg01no541_i18.g1 CHROMAT_FILE:
MSMg01no541_i18.g1 PHD_FILE: MSMg01no541_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:14 2005
         (604 letters)



>mm_chr13_103696177_103697180
          Length = 1004

 Score = 1131 bits (585), Expect = 0.0
 Identities = 600/605 (99%), Gaps = 2/605 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttgctaaatcagtgccaagtagtccatttacacgtcataggtgatcattaactagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atgttgctaaatcagtgccaagtagtccatttacacgtcataggtgatcattaactagat 745

                                                                       
Query: 61  ccatctctcgaatccatgaggccaaacaggtgtgcactgtagtcatcggtcaaatggatg 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 744 ccatctctcgaatccatgaggccaaacaggtgtgcgctgtagtcatcggtcaaatggatg 685

                                                                       
Query: 121 taaactcgtgaattttgtgtcattgaggttttctggtgagtgtggtggcttggcgtgtgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taaactcgtgaattttgtgtcattgaggttttctggtgagtgtggtggcttggcgtgtgc 625

                                                                       
Query: 181 atgcttctcccagacaacaggtagcgtcacctccgaagtcatcagggacttccctccgaa 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 624 atgcttctcccagacaacaggtagcgtcacctccggagtcatcagggacttccctccgag 565

                                                                       
Query: 241 cgccacaattgtgcctcgtcctatggtgaatcacccaagctttcaggtgtgcacagcaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cgccacaattgtgcctcgtcctatggtgaatcacccaagctttcaggtgtgcacagcaca 505

                                                                       
Query: 301 cactagtgttccggtgcggcagctggacttatttatttatttttgagggaccgatccatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cactagtgttccggtgcggcagctggacttatttatttatttttgagggaccgatccatt 445

                                                                       
Query: 361 tcagaccctgggatgggggggaactgcgaggatgctccagccctgcgcctgctcctgggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcagaccctgggatgggggggaactgcgaggatgctccagccctgcgcctgctcctgggc 385

                                                                       
Query: 421 agagtacaccagggagccgctctctttccccggagacccagctggaggggctgagccagg 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 384 agagtacaccagggagccgctctctttcccc-gagacccagctggaggggctgagccagg 326

                                                                       
Query: 481 gccctgccaccctacttccaactggatcctacagaaaggtgtcagattcaagtcctccca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gccctgccaccctacttccaactggatcctacagaaaggtgtcagattcaagtcctccca 266

                                                                       
Query: 541 taggtcaattttctaaaagtgctttcaagtttccatggtgttggg-tttttttttccccc 599
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 taggtcaattttctaaaagtgctttcaagtttccatggtgttgggttttttttttccccc 206

                
Query: 600 cagaa 604
           |||||
Sbjct: 205 cagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)