Query= MSMg01no545_c14.b1 MSMg01no545_c14.b1 CHROMAT_FILE:
MSMg01no545_c14.b1 PHD_FILE: MSMg01no545_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:04 2005
(619 letters)
>mm_chr13_16113517_16114533
Length = 1017
Score = 1147 bits (593), Expect = 0.0
Identities = 609/615 (99%), Gaps = 2/615 (0%)
Strand = Plus / Minus
Query: 5 gaattccattgatatgctgcctggtgggggaccttgacagaaagtctacataagcctaaa 64
|||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 817 gaataccattgaaatgctgcctggtgggggaccttgagagaaagtctacataagcctaaa 758
Query: 65 agaaggatgtttgtagcaattctcttttgctttcaggggttctcactagcttgatcatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 agaaggatgtttgtagcaattctcttttgctttcaggggttctcactagcttgatcatga 698
Query: 125 aggtatgccaaggcttaagtaaacaggctcctttttacttaaaaggtatgcaaattccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 aggtatgccaaggcttaagtaaacaggctcctttttacttaaaaggtatgcaaattccac 638
Query: 185 atacacaaaaaagtcctcctctcagatttgtgggatatctgataattccccattaaataa 244
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atacac--aaaagtcctcctctcagatttgtgggatatctgataattccccattaaataa 580
Query: 245 tcagtatacacataaagtttcagcttaattagcctggttttcctcatcaacatcctgggt 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 579 tcagtatacacataaagtttcagcttaattagtctggttttcctcatcaacatcctgggt 520
Query: 305 aaaatatgctgcccttttacaaatcggtaataatgacgtctctgttaatgtagaaagcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aaaatatgctgcccttttacaaatcggtaataatgacgtctctgttaatgtagaaagcct 460
Query: 365 tggcattcacagtgcacatttaaacttgccatgaggggagcacagctctgctgtaaaata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tggcattcacagtgcacatttaaacttgccatgaggggagcacagctctgctgtaaaata 400
Query: 425 tgtgttacttaaattttccattcttcatcaagtttccctgtgcctagatacagtacagtc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgtgttacttaaattttccattcttcatcaagtttccctgtgcctagatacagtacagtc 340
Query: 485 aggagcatgaagggcctacactacagcctgtgcgttctctcgggcactaagtcggcctct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aggagcatgaagggcctacactacagcctgtgcgttctctcgggcactaagtcggcctct 280
Query: 545 ggatggcttccagaggtgtctgcggaaggcagcgagtaagatctgaaaggttatttttcc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ggatggcttccagaggtgtctgcggaaggcagcgagtaagatctgaaaggttatttttcc 220
Query: 605 tttgacctacagtag 619
|||||||||||||||
Sbjct: 219 tttgacctacagtag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1017
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1007
Effective search space: 613263
Effective search space used: 613263
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_c14.g1 MSMg01no545_c14.g1 CHROMAT_FILE:
MSMg01no545_c14.g1 PHD_FILE: MSMg01no545_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:04 2005
(486 letters)
>mm_chr13_15946013_15946898
Length = 886
Score = 924 bits (478), Expect = 0.0
Identities = 484/486 (99%)
Strand = Plus / Plus
Query: 1 actgatttctttgctgtaacacacaacttctgtcacctttatactcttgagtgttcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgatttctttgctgtaacacacaacttctgtcacctttatactcttgagtgttcttgt 260
Query: 61 acacacacatcatgggcctgggctgtatctccatttgttacccaccactgggcttgcata 120
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 261 acacacacatcatgggcctgggctgtatctacatttgttacccagcactgggcttgcata 320
Query: 121 gaacatccttctggctaatataactttagttatagaatatgacatgtaataaatgtgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacatccttctggctaatataactttagttatagaatatgacatgtaataaatgtgatt 380
Query: 181 gctccaagtggctggtctttggcaagtcccagagctgtactttgccaactgcccctttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctccaagtggctggtctttggcaagtcccagagctgtactttgccaactgcccctttct 440
Query: 241 ctaatttcccatctcttgtatattttaagatgaaacaatccatttttggttcatttgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaatttcccatctcttgtatattttaagatgaaacaatccatttttggttcatttgtaa 500
Query: 301 ttatagtaattcatcagaacctttgttgtaagactcatttgatgttcaaatagtcttatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatagtaattcatcagaacctttgttgtaagactcatttgatgttcaaatagtcttatg 560
Query: 361 aacttttcgacagcactttgaaaatattattcctagaatccagaaacagtcttctgtcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacttttcgacagcactttgaaaatattattcctagaatccagaaacagtcttctgtcag 620
Query: 421 ttataaattaatttcatcatgacattgtgttattttagtccaagacctatattagttaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttataaattaatttcatcatgacattgtgttattttagtccaagacctatattagttaaa 680
Query: 481 aggcct 486
||||||
Sbjct: 681 aggcct 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
