NNNAAAAGACTTTTCNCCCCCTAAAAAATATTTGTCGGGGCCCGTCTCTT
AATTAACGGTAAACTTCCCAACTTAAATAAAGGTTTTATCAAAGGGAATT
CCCGCCGGGGAAATTTCTCTCAAAAAAAAAGAAACCCCCCCAGGTGGGAA
AAAAACCTTTTTCTTTTCCAAAAAAGGGGGCCCAACAACTTCCCCTAAAA
TCCCCTTCCCCAAAATAGGACCCCCCTTCCCCGGGGGTGAGAAAAAAAAA
TTTCTAAAAAATATTTTTGAAGGCCCCTTTTGGGGGGGCCCCTTTTTTTT
TTTTTATAAAAAATTCTCCCACAACCCCCCCGGGGGGGGGTTTTTTCCTC
TTTTTTAAAAAAAAAATTTTTTTTTTTCAAAAAAAAACTCTCCCCCACAA
AAATTTTTTTTTTTGGGGTGGAAAAAAGAGAAAAAAAAAACCCCCTCTTT
CCCTCCGCNNGAAAGGAAAAAAANAAAAAAAAGGGGGGGGGGGGTCACAA
CCCCCCCCTTTTTTTTATTACAAAAAAAAAAATTATTTTTTCCCCCCCCC
CCCGGGGAGGGGGAGAATNTATATAAAAAATATTTTTCTGTTGTGGCGGG
GGCAAAAACAATTACCAAGAGGGTGGGGTGGGGGGGGCGGGGGACCCACC
CCCCCTTCTTTCTTTTTTTCTTTTTTTTTTTTTTTTGTGTTGGGGGGGGG
GCGAAGAAAAAAAAAAATAAATANAAACCTCTTCCTTTTTTTTCTTTTTC
TTCTTTTGGGGNGTACGCGTTNTCTTTAATTCCCCTCTTTTGTGTTGTGT
GTGGATAGAATAATAAAAAATAAAAANNNNTAATGTTTTGGTTGTTTGTC
TGTTTACCGATATATAAATAAAAATAAAAATAAAAATC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTGACAGAATTTGAAGCGTTTATTTAATATGGTCT
TGATTGGAACTTGTTTTGGTTGCTTTTTAAAAGCATATTATCAATTTTAT
TTCTTGATCTTTTTAATATTTACCAGCACCATTTCTTATCCCATATACTC
TCCCACTGCCAAAGGCAAAGTCTGAATCTTGTCTCTGTGATATTGCTGCT
TAAAGAAAGTGCTGGGAAGTGAGATACGACCTCTGAGCTGAGTCAGAAAG
AGCACACAGCTTCTCCCTGTCTGTGTCCTTTCTGCCATTCTCTCTGCACA
TCTCAGTATCTCTGAGTGAACATGTAAGAGATTTACCTTCCTCCAACTGC
TGTACTGGGCATTTTGGGAAAGATTATGAAGCAGAACAGAGACAACCCTG
AGAAATCCTGTCTTCTTGCCTTCATATGTGATATGGGAAAGGCTTTTAGA
TGGTTCTAGATCCACTACTCTCAAATTTCCCAAATCTAGATGAGCTCAGT
CAGCCATTGAGCAAAGCAGATGGCAGGGTATCAGGAGGAGCAGACACGAC
TATTACTATGAAACTCTAGTAATACATACAATGCTGTGTCTGCATGCAAC
TAAGACAAACATTACTGTCTTGAGTTACTACATTTTAGGATAGTTTATTA
CACAGCAGCAGAGAACAGTAGCATATATCATACAAAATTAGTTAAAC

Query= MSMg01no547_c24.g1 MSMg01no547_c24.g1 CHROMAT_FILE:
MSMg01no547_c24.g1 PHD_FILE: MSMg01no547_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:45 2005
         (681 letters)



>mm_chr13_16843822_16844902
          Length = 1081

 Score = 1178 bits (609), Expect = 0.0
 Identities = 654/679 (96%), Gaps = 16/679 (2%)
 Strand = Plus / Minus

                                                                       
Query: 3   acagaatttgaagcgtttatttaatatggtcttgattggaacttgttttggttgcttttt 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 acagaatttgaagcgtttatttaatatggtcttgattggaacttgttttggttgcttttt 677

                                                                       
Query: 63  aaaagcatattatcaattttatttcttgatctttttaatatttaccagcaccatttctta 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaaagcatattatcaattttatttcttgatctttttaatatttaccagcaccatttctta 617

                                                                       
Query: 123 tcccatatactctcccactgccaaaggcaaagtctgaatcttgtctctgtgatattgctg 182
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 616 tcccatatactctcccactgccaaaggcaaagtctgaatcgtgtctctgtgatattgctg 557

                                                                       
Query: 183 cttaaagaaagtgctgggaagtgagatacgacctctgagctgagtcagaaagagcacaca 242
           |||||||| |||||||||||| ||| || |||||||||||||||||||||||||||||||
Sbjct: 556 cttaaagagagtgctgggaagcgaggtatgacctctgagctgagtcagaaagagcacaca 497

                                                                       
Query: 243 gcttctccctgtctgtgtcctttctgccattctctctgcacatctcagtatctctgagtg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gcttctccctgtctgtgtcctttctgccattctctctgcacatctcagtatctctgagtg 437

                                                                       
Query: 303 aacatgtaagagatttaccttcctccaactgctgtactgggcattttgggaaagattatg 362
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 436 aacatgtaagagatttaccttcctccaactgctgtactgggcatcttgggaaagattatg 377

                                                                       
Query: 363 aagcagaacagagacaaccctgagaaatcctgtcttcttgccttcatatgtgatatggga 422
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aagcagaacagagacgaccctgagaaatcctgtcttcttgccttcatatgtgatatggga 317

                                                                       
Query: 423 aaggcttttagatggttctagatccactactctcaaatttcccaaatctagatgagctca 482
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 316 aaggcttttagatggttctagatccactactctcaaatttcccaaatctagatgagttca 257

                                                                       
Query: 483 gtcagccattgagcaaagcagatggcagggtatcaggaggagcagacacgactattacta 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct: 256 gtcagccattgagcaaagcagatggcagggtatcaggaggagcagacacgacta------ 203

                                                                       
Query: 543 tgaaactctagtaatacatacaatgctgtgtctgcatgcaactaagacaaacattactgt 602
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ----------gtaatacatacaatgctgtgtctgcatgcaactaagacaaacattactgt 153

                                                                       
Query: 603 cttgagttactacattttaggatagtttattacacagcagcagagaacagtagcatatat 662
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 152 cttgagttactacattttaggatagtttattacacagcagcagagaacggtagcatatat 93

                              
Query: 663 catacaaaattagttaaac 681
           |||||||||||||||||||
Sbjct: 92  catacaaaattagttaaac 74


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space:   718641
Effective search space used:   718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)