CCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTATGTAGATAAAGCTGGCCTCATATTCTTGGAGATCTACCTGT
CTCTGCTTCCCAAGGCCTGGAATTAAAAATGTAAGCCACCACACCTTAGA
AATTTTACTTTAAGAGAAACAGGTACTAGTCATCTCAATACTTCTAATTT
TTTCTGTCTATTTTCTTCTCATTGCTTAAATTTGTTAAGTGGCAGATGGA
GAAAACTAAGACATAGGGAAATAATTATCAAAATTTTTGTTTACTTGTGC
ATTTATCATCAATACAGTTTTTTATTTCTTTTTTTTTCTGTTGGTTTTCT
TATTGGTTTATTCCATGTAAAACATTTTGAATCTTCAATATAAGTGGTGA
ATCATTTCCTTAAGAGAAACAAGAATTCCCTCATCCAAGGATTGGCTATA
ACAAGTCTCTCAGTCTATTCTGACTACTCTAACAAAATGCCTTACACAAA
GTCATTTGTAAACAGCCGAAATTTATTTTTGCAGTACTGGGAGCTGATAA
AGCTCTTCATATTTAAAGTTCCAGTGGGATCAATGTTTCAACAACAGGCC
CTTCATCCTAATGGGAGACAACCATGTAAAGTCATTATGAAAATTATGTG
GATAGGTAAAGGAGCTTGTTTTCCTATTTATCCACTTCCCTTAGCACAAC
CACATAGGTGATACGTTTTTAAAAAGCTAAATGAAA

ACGATGCTGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATATGAACCTTTTTGGTCTGGGTTA
CCTCACTCAGCATATTCTCTAGTTCTTTCCATTTGCTTGTGAAATTCATG
ATGTCCTTGTTTTTAATAGCTGAATAGTATTCCACTGTGTAAATGGACCA
TATTTTCTGTATCCATTCTGCAGTTGAGAGACATCTGGGTTGTTTCCAGC
TTCTGGCTATTACAAATAAGGCTGCTGTGAACATAGTGGAGAATGTGTTC
TTGTGGTATGAACCATACATTTTGTAATATTTATTTCTGAGCTTGCTATT
CTTGATCAAAATACTCTTCATAAGAGTGAACTCTAGGACAGAGTCTATGC
TAAGCTGTTTTGAGATTTCTTTCCTAAGTGCAGTTAATCTAAATCTCTTC
ACTTTAGCCTCAGGCAGACTCTTTAGACAAGGGCAAAAAGCAGCCACATT
CGCTGAGCATGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAG
GCAAGCGGATTTCTGAGTTCGAGGACAATCTGGTCTACAAAGTGAGTTCC
AGGACAGCCAGGGCTATACAGAAAAACCCTGTCTCAAAAACACCAAAAAA
AAAAAAAAAAAAAGCAGCCCACATTCTTCACCCAAAATTTAACAGGGAAC
AACCCTCTAAGGCAAAAGTTGAAAATTCTTCCCCCTCCTGAAATCCTCT

Query= MSMg01no548_i02.b1 MSMg01no548_i02.b1 CHROMAT_FILE:
MSMg01no548_i02.b1 PHD_FILE: MSMg01no548_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:26 2005
         (517 letters)



>mm_chr13_84617404_84618323
          Length = 920

 Score =  853 bits (441), Expect = 0.0
 Identities = 506/549 (92%), Gaps = 35/549 (6%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcactatgtagataaagctggcctcatattcttggagatctacctgtctctgctt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggaattcactatgtagataaagctggcctcatattcttggagatctacctgtctctgctt 685

                                                                       
Query: 64  cccaaggcctggaattaaaaatgtaagccaccacac------------------------ 99
           ||||||| ||||||||||||||||||||||||||||                        
Sbjct: 684 cccaaggtctggaattaaaaatgtaagccaccacacctggccaactgcatttcaaagttc 625

                                                                       
Query: 100 --------cttagaaattttactttaagagaaacaggtactagtcatctcaatacttcta 151
                   ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 624 aaaatacacttagaaattttactttaagagaaacaggtactagtcatctcagtacttcta 565

                                                                       
Query: 152 attttttctgtctattttcttctcattgcttaaatttgttaagtggcagatggagaaaac 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attttttctgtctattttcttctcattgcttaaatttgttaagtggcagatggagaaaac 505

                                                                       
Query: 212 taagacatagggaaataattatcaaa-atttttgtttacttgtgcatttatcatcaatac 270
           |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||
Sbjct: 504 taagacatagggaaataattattaaatttttttgtttacttgtgcatttatcatcaatac 445

                                                                       
Query: 271 agttttttatttcttttttttt--ctgttggttttcttattggtttattccatgtaaaac 328
           ||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 444 agttttttacttcttttttttttcctgttggttttcttattggtttattccatgtaaaac 385

                                                                       
Query: 329 attttgaatcttcaatataagtggtgaatcatttccttaagagaaacaagaattccctca 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attttgaatcttcaatataagtggtgaatcatttccttaagagaaacaagaattccctca 325

                                                                       
Query: 389 tccaaggattggctataacaagtctctcagtctattctgactactctaacaaaatgcctt 448
           ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 tccaaagattggctataacaagtctctcagtctattctgactacactaacaaaatgcctt 265

                                                                       
Query: 449 acacaaagtcatttgtaaacagccgaaatttatttttgcagtactgggagctgataaagc 508
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 264 acacaaagtcatttgtaaacagcagaaatttatttttgcagtactgggagctgataaagc 205

                    
Query: 509 tcttcatat 517
           |||||||||
Sbjct: 204 tcttcatat 196


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 920
Length adjustment: 10
Effective length of query: 507
Effective length of database: 910
Effective search space:   461370
Effective search space used:   461370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)