AACTTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAACAACTCACTTAAAGAAATACAGGAGAACACTGCTAAAGAGT
TACAAGTCCTTAAAGAAAAACAGGAAAACACTGCTAAAGAGTTACAAGTC
CTTAAAGAAAAACAGGAAAACACAACCAAACAGGTAGAAGTCCTTATAGA
AAAACAGGAAAACACATCCAAACAGGTGATGGAAATGAACAAAACCATAC
TAGACCTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCG
ACGCTGGAGATAGAAACCCTAGGAAAGAAATCTGGAACCATAGATGCCAG
CATCAGCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAG
ACTCCATAGAGAACATCGGCACAACAATCAAAGAAAATGGAAAATGCAAA
AAGATCCTAACTCAAAACATCCAGGAAATCCAGGACACAATGAGAAGACC
AAACCTACGGATAATAGGAGTGGATGAGAATGAAGATTTTCAACTCAAAG
GACCAGCAAACATCTTCAACAAAATTATTGAAGAAAACTTCCCAAATCTA
AAGAAAGAGATGCCCATGGAACATACAGAAGCCTACAGAACTCCAAATAG
ACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAACACCCA
ATGCCCTAAATAAAGATTGAATACTAAAAGCAGTAAGGG

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGAAAGGAAAGCCCATGATCTTAGA
CTTAACTGCCCTCCTGTTTTCACCTCTCTTTCTTCCTCCTTTCCTTCCTT
ACATTTCCTCTCTTTTCACCTACTAATTGTTGACATAACAAGAGTGTTCT
TTGCAGGTTAGAAAGAACATATCAACCTACATTCCAACACAGAAGACTTA
ATTTCAAAACATGGCCTTATTTTCAGGTATTTTCAACTTTGTCAATTAAC
ATTTCACAAGATGTGTATGGTATGTGTTGGGATGAGGGTCATGTGTAGGG
TAGGTGTCTAGTGGTGTGTACATGTGTTCTTGTGGTATATGTGTGCTATA
TTATAATGTCTATGTGATGTGTTTCATGTGTATACATGTGTGTATTCTGT
GAGTATGTGTGCATGTATTTGTGTATATAGCATATGTATTATGTGCATGT
GTGTATGGTGTGTGTTTATGTGTGCATAATGTGTATAATGTGTGTGTGTA
TACATGTATATGTGTGTGGTGTATGTGTGTATATATGTATACAGTGCATG
TATGGAATATGGAGCTTTATACACACACACCCTATATATACTATATATAT
GTATATACATATATATGTGTGTAAGTGCCTGGGATATATGATGTGGGTAT
AGAATATTTATGGGCATTTGGGAAATGTTCTA

Query= MSMg01no548_l19.g1 MSMg01no548_l19.g1 CHROMAT_FILE:
MSMg01no548_l19.g1 PHD_FILE: MSMg01no548_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:44 2005
         (496 letters)



>mm_chr13_17194882_17195777
          Length = 896

 Score =  872 bits (451), Expect = 0.0
 Identities = 487/501 (97%), Gaps = 6/501 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagaaaggaaagcccatgatcttagacttaactgccctcctgttttcacctctctttctt 60
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cagaaaggaaaggccgtgatcttagacttaactgccctcctgttttcacctctctttctt 493

                                                                       
Query: 61  cctcctttccttccttacatttcctctcttttcacctactaattgttgacataacaagag 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 492 cctcctttccttccttacatttcctctcttttcatctactaattgttgacataacaagag 433

                                                                       
Query: 121 tgttctttgcaggttagaaagaacatatcaacctacattccaacacagaagacttaattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgttctttgcaggttagaaagaacatatcaacctacattccaacacagaagacttaattt 373

                                                                       
Query: 181 caaaacatggccttattttcaggtattttcaactttgtcaattaacatttcacaagatgt 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 caaaatatggccttattttcaggtattttcaactttgtcaattaacatttcacaagatgt 313

                                                                       
Query: 241 gtatggtatgtgttgggatgagggtcatgtgtagggtaggtgtctagtggtgtgtacatg 300
           |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||
Sbjct: 312 gtatggtatgtgttgggatgagggtcatgtgtagggtaggtgtctaatggtgtatatatg 253

                                                                       
Query: 301 tgttcttgtggtatatgtgtgctatattataatgtctatgtgatgtgtttcatgtgtata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgttcttgtggtatatgtgtgctatattataatgtctatgtgatgtgtttcatgtgtata 193

                                                                       
Query: 361 catgtgtgtattctgtgagtatgtgtgcatgtattt---gtgtatatagcatatgtatta 417
           | ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||
Sbjct: 192 cgtgtgtgtattctgtgagtatgtgtgcatgtatttgtggtgtatatagcatatgtatta 133

                                                                       
Query: 418 tgtgcatgtgtgtatggtgtgtgtttatgtgtgcataatgtgtataa--tgtgtgtgtgt 475
           |||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||
Sbjct: 132 tgtgcatgtgtgtatggtgtgtgtttatgtgtgcat-atgtgtataatgtgtgtgtgtgt 74

                                
Query: 476 atacatgtatatgtgtgtggt 496
           |||||||||||||||||||||
Sbjct: 73  atacatgtatatgtgtgtggt 53


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)