BAC Information

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BAC

Clone NameB6Ng01-001A17
Chromosome14 (Build37)
Map Location 22,308,249 - 22,447,418
singlet/doubletdoublet
Overlap geneMyst4
Upstream geneZmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
Downstream geneEG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075, EG435392
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001A17.bB6Ng01-001A17.g
ACCDH839473DH839474
length1,063957
definitionDH839473|Mus musculus domesticus DNA, BAC clone: B6Ng01-001A17, 5' end.DH839474|Mus musculus domesticus DNA, BAC clone: B6Ng01-001A17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,446,361 - 22,447,418)(22,308,249 - 22,309,210)
sequence
gaattcattcctgtaaactgtcctctgacctccatgcctgtaccaaggca
ctggtaatgcaggccccatctcccctgacaaagagattaatgcaattttt
aaaaataagctttgttatgttataaagggctttagggttgcattatcatc
cagatagtgactattgtcccttacttttctatatgaatatcctcactcca
tacacaaagaaaaatgttaaagagagaaatctgacatttgctatagctgc
aggagaacaaacacaaagtgtctgtcaagggcagaataaggaatgacaat
ccataatccatactatttcttcagatcaatggtaccacaagtcttcagca
tgactgggtgctgctaaaaacaaagctagaaacccaggcagacagggtga
ctgaaagggacggagggggaccgctggccacacaccacttactgtctact
gatggtaagacagtgtgattactgtatgcctttgagacgcctatagcctt
acttcttcacgtctgctgagagtaacccaagtggacctgacatggtaagc
ggaaccatttagagaaattactagacagtaaaaatgaagatgacttcaat
tgattataaaagacgacagtgcgctcatcaatgccagaaagctaaaaatg
gacacattttcatatggcaagccatctgcgtcaggaccactggtaaactg
agaagggatgtgctttttggttacaatttgaaattgctattttccaaatg
tggacaaaaattattagaaaccgttttagaagctttatcttattctttat
tctgtgtttgagagaatgcatgcttgtgtggacctctgcgctgtgctgag
cttcagagaacaatttttgggagctggctctttccaccatacctgtgttt
tgaactcggctgtcaggtttgcaaagcaaatgcgtttacccacaaagcca
tctttctgccattactattaattttttggtttttctctatgtagcccctg
ctggtccggaaattcgatctggagaaccaggctgggcctctgaatttcat
agctaggcctgca
gaattctttcagtaaggctctcattcacattctgccaagacatccgccac
ctattcttgagttcacacaaaaaaattaaaagcaaaacaagagtcctgct
aatttagcaacttgggagatgcagctgctgctccctgggcaccagaaagg
ctggcctcaaccttcaggcctcagcctgagggaggtctcccaggagttat
attgtatcctgcagctcaaggcctcattgtgacagctgagtgacttagct
ggcactgtgggctggagaatgataaaggtacaaagaacaggcagcttggt
agttggggatggcactggatggggggggcgggtacatggctggttttgcc
taggcctcctatgagcccctacttaggcagctgctgctgcccaaggcaca
gcagttctggccgttcactccaccctctttgtaaaacaatcctcgcatca
attaagtgtaaggcttttgtcgtccaaagaaagtggtaattcccatatcc
tttcagttggttgtgtgcctgtctgcctgtctgtccatgtctccagacct
atccatacctgacctatgactgttgtcttggtgactaccagtaacacctt
cttttttatgcattgtgtttcaggactccttccttctatccctagtatca
gttcaccctccctgggctctgatatctgatttcctggtgccagtttcctc
tcccactgatggcctatagtgtagtaagatcatgggctcctcagatctgc
atctgtcaataatctgctgctctcacaaagtgcagtcctaggctgggcgt
gattgtacatgcctataatcccaacactcaggaggcagaggcaggcagat
ttctgacttcaaggcagcctgatctctcaagtgagttcccagacgacagt
gctacaatgagctcttgactgaaaatcaaaaatacaaaagaaagagtgca
gtcctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22446361_22447418
seq2: B6Ng01-001A17.b_44_1106 (reverse)

seq1  TGCAGGCCTAGCTCTG-AATTCA-AGG-CCAGCCTGG-TCTACAGATCGA  46
      ||||||||||||| || |||||| ||| ||||||||| ||| ||||||||
seq2  TGCAGGCCTAGCTATGAAATTCAGAGGCCCAGCCTGGTTCTCCAGATCGA  50

seq1  ATTTCAGGA-CAGCAGGGGCTACATAGAGAAAAACCAAAAAATTAATAGT  95
      ||||| ||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCGGACCAGCAGGGGCTACATAGAGAAAAACCAAAAAATTAATAGT  100

seq1  AATGGCAGAAAGATGGCTTTGTGGGTAAAGGCATTTGCTTTGCAAACCTG  145
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATGGCAGAAAGATGGCTTTGTGGGTAAACGCATTTGCTTTGCAAACCTG  150

seq1  ACAGCCGAGTTCAAAACACAGGTATGGTGGAAAGAGCCAGCTCCCAAAAG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACAGCCGAGTTCAAAACACAGGTATGGTGGAAAGAGCCAGCTCCCAAAAA  200

seq1  TTGTTCTCTGAAGCTCAGCACAGCGCAGAGGTCCACACAAGCATGCATTC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCTGAAGCTCAGCACAGCGCAGAGGTCCACACAAGCATGCATTC  250

seq1  TCTCAAACACAGAATAAAGAATAAGATAAAGCTTCTAAAACGGTTTCTAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACACAGAATAAAGAATAAGATAAAGCTTCTAAAACGGTTTCTAA  300

seq1  TAATTTTTGTCCACATTTGGAAAATAGCAATTTCAAATTGTAACCAAAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTGTCCACATTTGGAAAATAGCAATTTCAAATTGTAACCAAAAA  350

seq1  GCACATCCCTTCTCAGTTTACCAGTGGTCCTGACGCAGATGGCTTGCCAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCCCTTCTCAGTTTACCAGTGGTCCTGACGCAGATGGCTTGCCAT  400

seq1  ATGAAAATGTGTCCATTTTTAGCTTTCTGGCATTGATGAGCGCACTGTCG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATGTGTCCATTTTTAGCTTTCTGGCATTGATGAGCGCACTGTCG  450

seq1  TCTTTTATAATCAATTGAAGTCATCTTCATTTTTACTGTCTAGTAATTTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATAATCAATTGAAGTCATCTTCATTTTTACTGTCTAGTAATTTC  500

seq1  TCTAAATGGTTCCGCTTACCATGTCAGGTCCACTTGGGTTACTCTCAGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATGGTTCCGCTTACCATGTCAGGTCCACTTGGGTTACTCTCAGCA  550

seq1  GACGTGAAGAAGTAAGGCTATAGGCGTCTCAAAGGCATACAGTAATCACA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGAAGAAGTAAGGCTATAGGCGTCTCAAAGGCATACAGTAATCACA  600

seq1  CTGTCTTACCATCAGTAGACAGTAAGTGGTGTGTGGCCAGCGGTCCCCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTACCATCAGTAGACAGTAAGTGGTGTGTGGCCAGCGGTCCCCCT  650

seq1  CCGTCCCTTTCAGTCACCCTGTCTGCCTGGGTTTCTAGCTTTGTTTTTAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCCCTTTCAGTCACCCTGTCTGCCTGGGTTTCTAGCTTTGTTTTTAG  700

seq1  CAGCACCCAGTCATGCTGAAGACTTGTGGTACCATTGATCTGAAGAAATA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCCAGTCATGCTGAAGACTTGTGGTACCATTGATCTGAAGAAATA  750

seq1  GTATGGATTATGGATTGTCATTCCTTATTCTGCCCTTGACAGACACTTTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGATTATGGATTGTCATTCCTTATTCTGCCCTTGACAGACACTTTG  800

seq1  TGTTTGTTCTCCTGCAGCTATAGCAAATGTCAGATTTCTCTCTTTAACAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTCTCCTGCAGCTATAGCAAATGTCAGATTTCTCTCTTTAACAT  850

seq1  TTTTCTTTGTGTATGGAGTGAGGATATTCATATAGAAAAGTAAGGGACAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGTGTATGGAGTGAGGATATTCATATAGAAAAGTAAGGGACAA  900

seq1  TAGTCACTATCTGGATGATAATGCAACCCTAAAGCCCTTTATAACATAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACTATCTGGATGATAATGCAACCCTAAAGCCCTTTATAACATAAC  950

seq1  AAAGCTTATTTTTAAAAATTGCATTAATCTCTTTGTCAGGGGAGATGGGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTATTTTTAAAAATTGCATTAATCTCTTTGTCAGGGGAGATGGGG  1000

seq1  CCTGCATTACCAGTGCCTTGGTACAGGCATGGAGGTCAGAGGACAGTTTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATTACCAGTGCCTTGGTACAGGCATGGAGGTCAGAGGACAGTTTA  1050

seq1  CAGGAATGAATTC  1058
      |||||||||||||
seq2  CAGGAATGAATTC  1063

seq1: chr14_22308249_22309210
seq2: B6Ng01-001A17.g_64_1020

seq1  GAATTCTTTCAGTAAGGCTCTCATTCACATTCTGCCAAGACATCCGCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTAAGGCTCTCATTCACATTCTGCCAAGACATCCGCCAC  50

seq1  CTATTCTTGAGTTCACACAAAAAAATTAAAAGCAAAACAAGAGTCCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTGAGTTCACACAAAAAAATTAAAAGCAAAACAAGAGTCCTGCT  100

seq1  AATTTAGCAACTTGGGAGATGCAGCTGCTGCTCCCTGGGCACCAGAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGCAACTTGGGAGATGCAGCTGCTGCTCCCTGGGCACCAGAAAGG  150

seq1  CTGGCCTCAGCCTTCAGGCCTCAGCCTGAGGGAGGTCTCCCAGGAGTTAT  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCAACCTTCAGGCCTCAGCCTGAGGGAGGTCTCCCAGGAGTTAT  200

seq1  ATTGTATCCTGCAGCTCAAGGCCTCATTGTGACAGCTGAGTGACTTAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATCCTGCAGCTCAAGGCCTCATTGTGACAGCTGAGTGACTTAGCT  250

seq1  GGCACTGTGGGCTGGAGAATGATAAAGGTACAAAGAACAGGCAGCTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGTGGGCTGGAGAATGATAAAGGTACAAAGAACAGGCAGCTTGGT  300

seq1  AGTTGGGGATGGCACTGGATGGTGGGGGCGGGTACATGGCTGGTTTTGCC  350
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGTTGGGGATGGCACTGGATGGGGGGGGCGGGTACATGGCTGGTTTTGCC  350

seq1  TAGGCCTCCTATGAGCCCCTACTTAGGCAGCTGCTGCTGCCCAAGGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTCCTATGAGCCCCTACTTAGGCAGCTGCTGCTGCCCAAGGCACA  400

seq1  GCAGTTCTGGCCGTTCACTCCACCCTCTTTGTAAAACAATCCTCGCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCTGGCCGTTCACTCCACCCTCTTTGTAAAACAATCCTCGCATCA  450

seq1  ATTAAGTGTAAGGCTTTTGTCGTCCAAAGAAAGTGGTAATTCCCATATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGTAAGGCTTTTGTCGTCCAAAGAAAGTGGTAATTCCCATATCC  500

seq1  TTTCAGTTGGTTGTGTGCCTGTCTGCCTGTCTGTCCATGTCTCCAGACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTGGTTGTGTGCCTGTCTGCCTGTCTGTCCATGTCTCCAGACCT  550

seq1  ATCCATACCTGACCTATGACTGTTGTCTTGGTGACTACCAGTAACACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATACCTGACCTATGACTGTTGTCTTGGTGACTACCAGTAACACCTT  600

seq1  CTTTTTTATGCATTGTGTTTCAGGACTCCTTCCTTCTATCCCTAGTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTATGCATTGTGTTTCAGGACTCCTTCCTTCTATCCCTAGTATCA  650

seq1  GTTCACCCTCCCTGGGCTCTGATATCTGATTTCCTGGTGCCAGTTTCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCCTCCCTGGGCTCTGATATCTGATTTCCTGGTGCCAGTTTCCTC  700

seq1  TCCCACTGATGGCCTATAGTGTAGTAAGATCATGGGCTCCTCAGATCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTGATGGCCTATAGTGTAGTAAGATCATGGGCTCCTCAGATCTGC  750

seq1  ATCTGTCAATAATCTGCTGCTCTCA-AAAGTGCAGTCCTAAGCTGGGCGT  799
      ||||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  ATCTGTCAATAATCTGCTGCTCTCACAAAGTGCAGTCCTAGGCTGGGCGT  800

seq1  GGTTGTACATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGAT  849
      | |||||||||||| |||||||| ||||| ||||||||||||||||||||
seq2  GATTGTACATGCCTATAATCCCAACACTCAGGAGGCAGAGGCAGGCAGAT  850

seq1  TTCTGAGTTCAAGGCCAGCCTGGTCTACGAAGTGAGTTCCAGGACAGCCA  899
      |||||| ||||||| ||||||| |||   |||||||||||  ||| | ||
seq2  TTCTGACTTCAAGG-CAGCCTGATCTCTCAAGTGAGTTCCCAGAC-GACA  898

seq1  GGGCTACACATAGAAACCCTGTCTCAAAAAACCAAAAAAAGAAAAAAAAA  949
      | |||||| || ||   | || ||   |||| |||||| | |||| ||| 
seq2  GTGCTACA-AT-GAGCTCTTGACT--GAAAATCAAAAATACAAAAGAAAG  944

seq1  AGTGCAGTCCTGA  962
      |||||||||||||
seq2  AGTGCAGTCCTGA  957