BAC Information

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BAC

Clone NameB6Ng01-001K06
Chromosome14 (Build37)
Map Location 100,001,607 - 100,142,230
singlet/doubletdoublet
Overlap geneLOC668672
Upstream geneLOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671
Downstream geneEG546623, Klf12, LOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001K06.bB6Ng01-001K06.g
ACCDH839903DH839904
length1,204878
definitionDH839903|Mus musculus domesticus DNA, BAC clone: B6Ng01-001K06, 5' end.DH839904|Mus musculus domesticus DNA, BAC clone: B6Ng01-001K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,140,995 - 100,142,230)(100,001,607 - 100,002,486)
sequence
gaattccaagctgaccaaatgattgcagtgcctgaccacagccacctcat
aaagcataaaacaatgcattgcctttgctccctgcctggcataagtggcc
ataggtaagaggaaacttggcaagtttgtcctctcactccattgtaaatc
cttgccttgtaaatctcagctgaggtagccagctgtccctctctcttagt
caaaaggcaacctggtaagaaaacacctgaaagtcactcagtaacgtaca
aagaccatcaagatcctggaagcactagcgatacttatgtcacataaata
tccttttctttcattcatttttctgttgatatttagctatcaagatataa
aataatgacagcaaactggctagtagctttctttccttcagagtcagtgg
tcctgggcttaatctaaacctccagaactcctccaccaaaatcacctaga
gagcttaaggaagaacagaacctgaaactctgtcctcggcctgggtcaca
tctggatgtaagtcccaggaagagccattttccaagcacatttcttcctt
catgacccttgtgtcaatgaagcttagaaaccattgccccacactgtgtg
tcggtgttcatggtccttcctcctgcacttgtgtcttgatgagcagaaca
ggatggctggggtcagtctgatgagtagttactggttccttgagttgcta
aggatcccaaagttttctcacacctctacctgatagacattggcttttct
gtaatgtttcagagtatataagacatgtgtacatttaattttcccataaa
ctacacaaggcctattatgaggtaattgatagtatgttctaggaaagtca
ccactttatttaattgaaaaggaagtcctttaggacaagcatgatggcac
atactttttctccctgcactcagtaggcagagacagtggatctttgtgag
ttgagggccagacttatctacatattgagttccaggattgccagagatac
acagtgagacactgactcagaaaaaaattaaagagatgtcctaaatcata
tcaagtgtacaggataaatatagttaagatcaagtttgcaggaaatgact
ataaaatccaagtatagtatctatgaaaattatgctggagatgtttattg
atagaattgctaagatctagtgccaagacaggaatgcattccatattttg
gggt
gaattcttgctaccacttatactgaccaagctgtttatgaaggacttttt
tttccctaaagaaaaaaggaagatggaaggttgctactgtcatttgctgt
ctcagtgtgactgttgtggattcattggcctattttttttttttttcatt
tgagtcctgtagatcaagagagtagtagactgtgctgggtaaggggcggg
ggtgggagtaagaagaaatggggagttaggcaggagcctccctaaactgc
cctgcagacataggtcagagttagtaagaagaggtcagaagaacacgtct
ccagatttacccccttgcatatgagcaagaacattccaatgtcctacact
atcaggaaaataggcaattgtagcaagtcaactctaatgtcaccttattt
tcgatcactcagaaaaactcactgaggtacaaatcaccaagcctgccact
gagttttctctcagtcacatacctcaaaggcaagaaacaagagaagaggc
agctctgtggctatgcgctgggatctgacactgttgggatgtggagcagg
gactcagccattttaagctaaagggaggaaaatggactgtgaaatcttgg
gctcattcgaatgtttcatgaagatagtgctcagaaaaatgaggctcaag
aagtaaaaacaatatgctaagaacaaaacaaccaaccagacaaatgagtc
tggagctggagagctgtctctttggtgaaaagcgctctcgactgggacct
gagttggatcccaggaccctagtcagtggctcacaactgtctgaaaccca
gcagtgtgagcctgacgctctctctggacctccctgaaacctgaacaacg
actatgtcctctccctagacacttagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100140995_100142230
seq2: B6Ng01-001K06.b_46_1249 (reverse)

seq1  ACCCCAAAATATGGGATTACAATCCCTGCTTTTGCCAACTTTAAGATCTA  50
      |||||||||||||| ||    || ||||  || ||  |||   |||||| 
seq2  ACCCCAAAATATGGAAT--GCATTCCTGTCTTGGC--ACT---AGATCT-  42

seq1  TAGCCAATCTATCAAATAAAACCAATCTCCAAGCCTTAATTTTCTCATTA  100
      |||| | |||||| ||||||    |||||||   | ||||||||    ||
seq2  TAGCAATTCTATC-AATAAA---CATCTCCA--GCATAATTTTC---ATA  83

seq1  GATACTAATAATTTTTGATATTTATAGTTCATTTCCTGCAAACTCTGATC  150
      |||||| |||   || ||| ||||||| |||||||||||||||| |||||
seq2  GATACT-ATA--CTTGGAT-TTTATAG-TCATTTCCTGCAAACT-TGATC  127

seq1  TTTAACTATA-TTATCCTGTAACACTTTGATATGGGATTTAGGAACATTC  199
       ||||||||| ||||||||| |||| |||||||  |||||||| ||| ||
seq2  -TTAACTATATTTATCCTGT-ACAC-TTGATAT--GATTTAGG-ACA-TC  170

seq1  TCTTTAATTTTTTTTCTTGAGTCAGTGTCTCACTGTGTATCTCTGGCAAT  249
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  TCTTTAATTTTTTT--CTGAGTCAGTGTCTCACTGTGTATCTCTGGCAAT  218

seq1  CCTGGAACTCAATATGTAGATAAGTCTGGCCCTCAACTCACAAAGATCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTCAATATGTAGATAAGTCTGGCCCTCAACTCACAAAGATCCA  268

seq1  CCTGTCTCTGCCTACTGAGTGCAGGGAGAAAAAGTATGTGCCATCATGCT  349
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTGTCTCTGCCTACTGAGTGCAGGGAGAAAAAGTATGTGCCATCATGCT  317

seq1  TGTCCTAAAGGACTTCCTTTTCAATTAAATAAAGTGGTGACTTTCCTAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAAAGGACTTCCTTTTCAATTAAATAAAGTGGTGACTTTCCTAGA  367

seq1  ACATACTATCAATTACCTCATAATAGGCCTTGTGTAGTTTATGGGAAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTATCAATTACCTCATAATAGGCCTTGTGTAGTTTATGGGAAAAT  417

seq1  TAAATGTACACATGTCTTATATACTCTGAAACATTACAGAAAAGCCAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTACACATGTCTTATATACTCTGAAACATTACAGAAAAGCCAATG  467

seq1  TCTATCAGGTAGAGGTGTGAGAAAACTTTGGGATCCTTAGCAACTCAAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAGGTAGAGGTGTGAGAAAACTTTGGGATCCTTAGCAACTCAAGG  517

seq1  AACCAGTAACTACTCATCAGACTGACCCCAGCCATCCTGTTCTGCTCATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTAACTACTCATCAGACTGACCCCAGCCATCCTGTTCTGCTCATC  567

seq1  AAGACACAAGTGCAGGAGGAAGGACCATGAACACCGACACACAGTGTGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACAAGTGCAGGAGGAAGGACCATGAACACCGACACACAGTGTGGG  617

seq1  GCAATGGTTTCTAAGCTTCATTGACACAAGGGTCATGAAGGAAGAAATGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGTTTCTAAGCTTCATTGACACAAGGGTCATGAAGGAAGAAATGT  667

seq1  GCTTGGAAAATGGCTCTTCCTGGGACTTACATCCAGATGTGACCCAGGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAAAATGGCTCTTCCTGGGACTTACATCCAGATGTGACCCAGGCC  717

seq1  GAGGACAGAGTTTCAGGTTCTGTTCTTCCTTAAGCTCTCTAGGTGATTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAGAGTTTCAGGTTCTGTTCTTCCTTAAGCTCTCTAGGTGATTTT  767

seq1  GGTGGAGGAGTTCTGGAGGTTTAGATTAAGCCCAGGACCACTGACTCTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGGAGTTCTGGAGGTTTAGATTAAGCCCAGGACCACTGACTCTGA  817

seq1  AGGAAAGAAAGCTACTAGCCAGTTTGCTGTCATTATTTTATATCTTGATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAAAGCTACTAGCCAGTTTGCTGTCATTATTTTATATCTTGATA  867

seq1  GCTAAATATCAACAGAAAAATGAATGAAAGAAAAGGATATTTATGTGACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATATCAACAGAAAAATGAATGAAAGAAAAGGATATTTATGTGACA  917

seq1  TAAGTATCGCTAGTGCTTCCAGGATCTTGATGGTCTTTGTACGTTACTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATCGCTAGTGCTTCCAGGATCTTGATGGTCTTTGTACGTTACTGA  967

seq1  GTGACTTTCAGGTGTTTTCTTACCAGGTTGCCTTTTGACTAAGAGAGAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTCAGGTGTTTTCTTACCAGGTTGCCTTTTGACTAAGAGAGAGG  1017

seq1  GACAGCTGGCTACCTCAGCTGAGATTTACAAGGCAAGGATTTACAATGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGGCTACCTCAGCTGAGATTTACAAGGCAAGGATTTACAATGGA  1067

seq1  GTGAGAGGACAAACTTGCCAAGTTTCCTCTTACCTATGGCCACTTATGCC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGGACAAACTTGCCAAGTTTCCTCTTACCTATGGCCACTTATGCC  1117

seq1  AGGCAGGGAGCAAAGGCAATGCATTGTTTTATGCTTTATGAGGTGGCTGT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGAGCAAAGGCAATGCATTGTTTTATGCTTTATGAGGTGGCTGT  1167

seq1  GGTCAGGCACTGCAATCATTTGGTCAGCTTGGAATTC  1236
      |||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGCACTGCAATCATTTGGTCAGCTTGGAATTC  1204

seq1: chr14_100001607_100002486
seq2: B6Ng01-001K06.g_67_941

seq1  GAATTCTTGCTACCACTTATACTGACCAAGCTGTTTATGAAGGACTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTACCACTTATACTGACCAAGCTGTTTATGAAGGACTTTTT  50

seq1  TTTCCCTAAAGAAAAAAGGAAGATGGAAGGTTGCTACTGTCATTTGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTAAAGAAAAAAGGAAGATGGAAGGTTGCTACTGTCATTTGCTGT  100

seq1  CTCAGTGTGACTGTTGTGGATTCATTGGCCTATTTTTTTTTTTTTTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTGACTGTTGTGGATTCATTGGCCTATTTTTTTTTTTTTTCATT  150

seq1  TGAGTCCTGTAGATCAAGAGAGTAGTAGACTGTGCTGGGTAAGGGGCGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCTGTAGATCAAGAGAGTAGTAGACTGTGCTGGGTAAGGGGCGGG  200

seq1  GGTGGGAGTAAGAAGAAATGGGGAGTTAGGCAGGAGCCTCCCTAAACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAGTAAGAAGAAATGGGGAGTTAGGCAGGAGCCTCCCTAAACTGC  250

seq1  CCTGCAGACATAGGTCAGAGTTAGTAAGAAGAGGTCAGAAGAACACGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGACATAGGTCAGAGTTAGTAAGAAGAGGTCAGAAGAACACGTCT  300

seq1  CCAGATTTACCCCCTTGCATATGAGCAAGAACATTCCAATGTCCTACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTTACCCCCTTGCATATGAGCAAGAACATTCCAATGTCCTACACT  350

seq1  ATCAGGAAAATAGGCAATTGTAGCAAGTCAACTCTAATGTCACCTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAAAATAGGCAATTGTAGCAAGTCAACTCTAATGTCACCTTATTT  400

seq1  TCGATCACTCAGAAAAACTCACTGAGGTACAAATCACCAAGCCTGCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATCACTCAGAAAAACTCACTGAGGTACAAATCACCAAGCCTGCCACT  450

seq1  GAGTTTTCTCTCAGTCACATACCTCAAAGGCAAGAAACAAGAGAAGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCTCTCAGTCACATACCTCAAAGGCAAGAAACAAGAGAAGAGGC  500

seq1  AGCTCTGTGGCTATGCGCTGGGATCTGACACTGTTGGGATGTGGAGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTGGCTATGCGCTGGGATCTGACACTGTTGGGATGTGGAGCAGG  550

seq1  GACTCAGCCATTTTAAGCTAAAGGGAGGAAAATGGACTGTGAAATCTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGCCATTTTAAGCTAAAGGGAGGAAAATGGACTGTGAAATCTTGG  600

seq1  GCTCATTCGAATGTTTCATGAAGATAGTGCTCAGAAAAATGAGGCTCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTCGAATGTTTCATGAAGATAGTGCTCAGAAAAATGAGGCTCAAG  650

seq1  AAGTAAAAACAATATGCTAAGAACAAAACAACCAACCAGACAAATGAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAACAATATGCTAAGAACAAAACAACCAACCAGACAAATGAGTC  700

seq1  TGGAGCTGGAGAGCTGTCTCTTTGGTGAAAAGCGCTCTCGACTGGGACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTGGAGAGCTGTCTCTTTGGTGAAAAGCGCTCTCGACTGGGACCT  750

seq1  GAGTTGGATCCCAGGACCCTAGTCAGTGGCTCACAACTGTCTGAAACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGATCCCAGGACCCTAGTCAGTGGCTCACAACTGTCTGAAACCCA  800

seq1  GCAGTGTGAGCCCTGACGCTCTCCTCTGGACCTCCCTGAAACCTGAAC-A  849
      |||||||||| ||||||||||| ||||||||||||||||||||||||| |
seq2  GCAGTGTGAG-CCTGACGCTCT-CTCTGGACCTCCCTGAAACCTGAACAA  848

seq1  CGACTATGTACCCTTCCCCCATAGACACTTA  880
      ||||||||| | ||    || ||||||||||
seq2  CGACTATGTCCTCT----CCCTAGACACTTA  875