BAC Information

Click to search

BAC

Clone NameB6Ng01-001K19
Chromosome14 (Build37)
Map Location 99,025,711 - 99,090,286
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668659, Dach1, LOC635593
Downstream geneLOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001K19.bB6Ng01-001K19.g
ACCDH839928DH839929
length1,1451,162
definitionDH839928|Mus musculus domesticus DNA, BAC clone: B6Ng01-001K19, 5' end.DH839929|Mus musculus domesticus DNA, BAC clone: B6Ng01-001K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,089,116 - 99,090,286)(99,025,711 - 99,026,878)
sequence
ttcccattgtcacttaaagagaatatttgtcttcttttttctttttaaag
aaagagagaatgaacttgtggaggtggaacagtggaaaaatggagagggt
ctaggaagagacaaggaatgggagactgagatcagaatatattgtgtgaa
agaaaatttattctcaacaagaaaaatagggtatcatagtgcatgcttat
aaccccagacctgggggggggtgtaaatgcgaggaaatcaggagttcaag
gccaaccttgattaaacaataagtttgaggctaatctggcctacaaaaga
atttacaaattctagataaacattaatagaaagtacactagtctataact
tccataccatactgtgttgttttcatgaacacccataaccatttttttta
tgttaggacaaagaataggcccagttctattttatagggattcctttttg
gataatatctaagagaagtatgcaactgtgaacaagatgtgcattcttca
agtgcaattcattcgcagtggggcctctaaattccccagggtaaatacta
atttgatgatatattgtaatgtgcacaatgtctagggcattgtaattagg
cactgcaaaaaaagaaggtggccaatgcactgaagcagctgagaataaca
gctagccagatcacttgcttattgtgtctgcagcctgaagacaatccttg
tttgaaccgcgcatggaatgtgtcccctccccttcctccctctctgtgca
tcgctagttctgattccctttggcttccccttttagtgttaaattcttga
tttcttcttcctacccattttccactctcaactccactaaaaagcatgtt
tctgaacattaagttttgagagtaagttctctgtattgatacattaattt
taaaggtaatgcaagttttatcccttgtatttctcaaaaaataaaaaaca
tcctgattatgttacttgagagactttattctgtcatgaactttgataaa
atccttccttatctttgactaacataattgaggttatttccatatatttt
tatcttttcataggtatgtctataacctctacccaaggaacatagattac
cccagatccaggagggttacttattttattttctgggcatcagcc
gaattccaggcttttagccgttaaaagtcagattaaacaactttgatcaa
gcccacctcctgctcaggtgcaaccgtgctcagaggtgggcttttccaac
aggctgatcacagacctctgccagatggatcctgaaaccacatcaccaca
ttccttgcctgcttcctgctctccaaggctgtgactcacacatttgaact
gcacacggagggctgccgcgccagtcacttacttacatttcaaatgcccc
agattaaagagaatataaatgagtaggagctttctgtgcttctcgcttca
gctccacatcccattcattaggggaaggtggagagaaaccacacagattg
acacaccatagcctgcctgcgaacttctaattcttcccttgatccttgcg
ggtttcctgacagagtgtgccttttatcaggatatctgatactttctcaa
tttcttccttcaacaagtactcaaaatagcagactgcccaatttgaaagg
cagctcagagaattccaggcagaacgctcacccaaatgcaaacaaagtga
gttgctccttatttgagggtcacacaaactggccctgcctccctgttagc
tttgctttcctgtgtttccatattcacactgactccgggcatccttgtct
actttgtcacatcctgccccatctatttctgctcttcctaccaccaatgt
tctcacatctctcctgcccgatgtgtcctttgattgtcccttattccttc
agatgtaaaacaagttctctcctaaattacagctagaaaacagagtagaa
gacacccagtgaaatatgagttttctttctgtgttagtcagggtactcta
gagtcacagaacttatggaatgtctctatatattaaggagatttattgta
ataacttacagtcttcagtccaattaacccagcaatagcggctatgaatc
tgaaatccaagaatctagtagttgctcagttcatgagctagttgtttcag
ctggtcttctgtgtaagctggaatcctgaagaacataggttgccaacaga
atgtgctggcagtgcagtaggccaagaagactggagtctttcctcctccc
aatgtcctatgtagtccccggcagaaaaacagccagattaaagggtgtga
caccactctaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99089116_99090286
seq2: B6Ng01-001K19.b_53_1197 (reverse)

seq1  GGCTGGATGCCCAGAAAAATTAAAAATTTAGTTTAACACTCCTGGGATTT  50
      |||| |||||||||||||  |||||  | ||  |||| ||||| ||||  
seq2  GGCT-GATGCCCAGAAAA--TAAAA--TAAG--TAACCCTCCT-GGAT--  40

seq1  CTTTGTGTATATCTTATGTTTCTATGGGT-GAGTTTATTAGACATAACTA  99
        | | ||| ||| |||||| || ||||| ||| ||| |||||||| |||
seq2  -CTGGGGTA-ATC-TATGTTCCT-TGGGTAGAGGTTA-TAGACATACCTA  85

seq1  ATTGAAAAGAT-AAAATATATGGAAATTAAACCTCAAATAATGTTAGTCA  148
        ||||||||| |||||||||||||||  |||||| ||| ||||||||||
seq2  --TGAAAAGATAAAAATATATGGAAAT--AACCTC-AATTATGTTAGTCA  130

seq1  AAGATAAGGAAGGATTTTTTAATCAAAGTTCATTGGACAGAATAAAGTCT  198
      ||||||||||||||||||   ||||||||||||  |||||||||||||||
seq2  AAGATAAGGAAGGATTTT---ATCAAAGTTCAT--GACAGAATAAAGTCT  175

seq1  CTCAAGTAACATAATTCAGGGTGTTTTTTTATTTTTTTGAGAAATACAAG  248
      |||||||||||||| ||||| ||||||||   ||||||||||||||||||
seq2  CTCAAGTAACATAA-TCAGGATGTTTTTT--ATTTTTTGAGAAATACAAG  222

seq1  GGATAAAACTTGCATTACCTTTAAAATTAATGTATCAATACAGAGAACTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAACTTGCATTACCTTTAAAATTAATGTATCAATACAGAGAACTT  272

seq1  ACTCTCAAAACTTAATGTTCAGAAACATGCTTTTTAGTGGAGTTGAGAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAAAACTTAATGTTCAGAAACATGCTTTTTAGTGGAGTTGAGAGT  322

seq1  GGAAAATGGGTAGGAAGAAGAAATCAAGAATTTAACACTAAAAGGGGAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATGGGTAGGAAGAAGAAATCAAGAATTTAACACTAAAAGGGGAAG  372

seq1  CCAAAGGGAATCAGAACTAGCGATGCACAGAGAGGGAGGAAGGGGAGGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGGAATCAGAACTAGCGATGCACAGAGAGGGAGGAAGGGGAGGGG  422

seq1  ACACATTCCATGCGCGGTTCAAACAAGGATTGTCTTCAGGCTGCAGACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTCCATGCGCGGTTCAAACAAGGATTGTCTTCAGGCTGCAGACAC  472

seq1  AATAAGCAAGTGATCTGGCTAGCTGTTATTCTCAGCTGCTTCAGTGCATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCAAGTGATCTGGCTAGCTGTTATTCTCAGCTGCTTCAGTGCATT  522

seq1  GGCCACCTTCTTTTTTTGCAGTGCCTAATTACAATGCCCTAGACATTGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCTTCTTTTTTTGCAGTGCCTAATTACAATGCCCTAGACATTGTG  572

seq1  CACATTACAATATATCATCAAATTAGTATTTACCCTGGGGAATTTAGAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTACAATATATCATCAAATTAGTATTTACCCTGGGGAATTTAGAGG  622

seq1  CCCCACTGCGAATGAATTGCACTTGAAGAATGCACATCTTGTTCACAGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTGCGAATGAATTGCACTTGAAGAATGCACATCTTGTTCACAGTT  672

seq1  GCATACTTCTCTTAGATATTATCCAAAAAGGAATCCCTATAAAATAGAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTTCTCTTAGATATTATCCAAAAAGGAATCCCTATAAAATAGAAC  722

seq1  TGGGCCTATTCTTTGTCCTAACATAAAAAAAATGGTTATGGGTGTTCATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTATTCTTTGTCCTAACATAAAAAAAATGGTTATGGGTGTTCATG  772

seq1  AAAACAACACAGTATGGTATGGAAGTTATAGACTAGTGTACTTTCTATTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACACAGTATGGTATGGAAGTTATAGACTAGTGTACTTTCTATTA  822

seq1  ATGTTTATCTAGAATTTGTAAATTCTTTTGTAGGCCAGATTAGCCTCAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATCTAGAATTTGTAAATTCTTTTGTAGGCCAGATTAGCCTCAAA  872

seq1  CTTATTGTTTAATCAAGGTTGGCCTTGAACTCCTGATTTCCTCGCATTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGTTTAATCAAGGTTGGCCTTGAACTCCTGATTTCCTCGCATTTA  922

seq1  CACCCCCCCCCAGGTCTGGGGTTATAAGCATGCACTATGATACCCTATTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCCCCCAGGTCTGGGGTTATAAGCATGCACTATGATACCCTATTT  972

seq1  TTCTTGTTGAGAATAAATTTTCTTTCACACAATATATTCTGATCTCAGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTGAGAATAAATTTTCTTTCACACAATATATTCTGATCTCAGTC  1022

seq1  TCCCATTCCTTGTCTCTTCCTAGACCCTCTCCATTTTTCCACTGTTCCAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTCCTTGTCTCTTCCTAGACCCTCTCCATTTTTCCACTGTTCCAC  1072

seq1  CTCCACAAGTTCATTCTCTCTTTCTTTAAAAAGAAAAAAGAAGACAAATA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAAGTTCATTCTCTCTTTCTTTAAAAAGAAAAAAGAAGACAAATA  1122

seq1  TTCTCTTTAAGTGACAATGGGAA  1171
      |||||||||||||||||||||||
seq2  TTCTCTTTAAGTGACAATGGGAA  1145

seq1: chr14_99025711_99026878
seq2: B6Ng01-001K19.g_64_1225

seq1  GAATTCCAGGCTTTTAGCCGTTAAAAGTCAGATTAAACAACTTTGATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTTTTAGCCGTTAAAAGTCAGATTAAACAACTTTGATCAA  50

seq1  GCCCACCTCCTGCTCAGGTGCAACCGTGCTCAGAGGTGGGCTTTTCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCTCCTGCTCAGGTGCAACCGTGCTCAGAGGTGGGCTTTTCCAAC  100

seq1  AGGCTGATCACAGACCTCTGCCAGATGGATCCTGAAACCACATCACCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGATCACAGACCTCTGCCAGATGGATCCTGAAACCACATCACCACA  150

seq1  TTCCTTGCCTGCTTCCTGCTCTCCAAGGCTGTGACTCACACATTTGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGCCTGCTTCCTGCTCTCCAAGGCTGTGACTCACACATTTGAACT  200

seq1  GCACACGGAGGGCTGCCGCGCCAGTCACTTACTTACATTTCAAATGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACGGAGGGCTGCCGCGCCAGTCACTTACTTACATTTCAAATGCCCC  250

seq1  AGATTAAAGAGAATATAAATGAGTAGGAGCTTTCTGTGCTTCTCGCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAGAGAATATAAATGAGTAGGAGCTTTCTGTGCTTCTCGCTTCA  300

seq1  GCTCCACATCCCATTCATTAGGGGAAGGTGGAGAGAAACCACACAGATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACATCCCATTCATTAGGGGAAGGTGGAGAGAAACCACACAGATTG  350

seq1  ACACACCATAGCCTGCCTGCGAACTTCTAATTCTTCCCTTGATCCTTGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCATAGCCTGCCTGCGAACTTCTAATTCTTCCCTTGATCCTTGCG  400

seq1  GGTTTCCTGACAGAGTGTGCCTTTTATCAGGATATCTGATACTTTCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCTGACAGAGTGTGCCTTTTATCAGGATATCTGATACTTTCTCAA  450

seq1  TTTCTTCCTTCAACAAGTACTCAAAATAGCAGACTGCCCAATTTGAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCTTCAACAAGTACTCAAAATAGCAGACTGCCCAATTTGAAAGG  500

seq1  CAGCTCAGAGAATTCCAGGCAGAACGCTCACCCAAATGCAAACAAAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAGAGAATTCCAGGCAGAACGCTCACCCAAATGCAAACAAAGTGA  550

seq1  GTTGCTCCTTATTTGAGGGTCACACAAACTGGCCCTGCCTCCCTGTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCCTTATTTGAGGGTCACACAAACTGGCCCTGCCTCCCTGTTAGC  600

seq1  TTTGCTTTCCTGTGTTTCCATATTCACACTGACTCCGGGCATCCTTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCCTGTGTTTCCATATTCACACTGACTCCGGGCATCCTTGTCT  650

seq1  ACTTTGTCACATCCTGCCCCATCTATTTCTGCTCTTCCTACCACCAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCACATCCTGCCCCATCTATTTCTGCTCTTCCTACCACCAATGT  700

seq1  TCTCACATCTCTCCTGCCCGATGTGTCCTTTGATTGTCCCTTATTCCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACATCTCTCCTGCCCGATGTGTCCTTTGATTGTCCCTTATTCCTTC  750

seq1  AGATGTAAAACAAGTTCTCTCCTAAATTACAGCTAGAAAACAGAGTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAAAACAAGTTCTCTCCTAAATTACAGCTAGAAAACAGAGTAGAA  800

seq1  GACACCCAGTGAAATATGAGTTTTCTTTCTGTGTTAGTCAGGGTACTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCAGTGAAATATGAGTTTTCTTTCTGTGTTAGTCAGGGTACTCTA  850

seq1  GAGTCACAGAACTTATGGAATGTCTCTATATATTAAGGAGATTTATTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACAGAACTTATGGAATGTCTCTATATATTAAGGAGATTTATTGTA  900

seq1  ATAACTTACAGTCTTCAGTCCAATTAACCCAGCAATAGGCGGCTATGAAT  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATAACTTACAGTCTTCAGTCCAATTAACCCAGCAATA-GCGGCTATGAAT  949

seq1  CTGAAATCCAAGAATCTAGTAGTTGCCCAGTTCCATGAGGCTAGTTGTTT  1000
      |||||||||||||||||||||||||| ||||| ||||| |||||||||||
seq2  CTGAAATCCAAGAATCTAGTAGTTGCTCAGTT-CATGA-GCTAGTTGTTT  997

seq1  CAGCTGGTCTTCTGTGTAAGCTGGAATCCTGAAG-ACATAGG-TGCCAAC  1048
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  CAGCTGGTCTTCTGTGTAAGCTGGAATCCTGAAGAACATAGGTTGCCAAC  1047

seq1  AG-ATGTGCTGGCAAGTGCAAGTAGGCAAAGAAGACT-GAGTC-TTCCTC  1095
      || |||||||||| ||||| ||||||| ||||||||| ||||| ||||||
seq2  AGAATGTGCTGGC-AGTGC-AGTAGGCCAAGAAGACTGGAGTCTTTCCTC  1095

seq1  CTCCCAATGTCCTTATGTAGTCCTCTGGCAGAAAACATGGCCCAGATTAA  1145
      |||||||||||| |||||||||| | |||||||||   |  |||||||||
seq2  CTCCCAATGTCC-TATGTAGTCC-CCGGCAGAAAAACAG--CCAGATTAA  1141

seq1  AGGTGTGTACCACCACTTCTAGA  1168
      ||| ||||  |||||| ||||||
seq2  AGG-GTGTGACACCAC-TCTAGA  1162