BAC Information

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BAC

Clone NameB6Ng01-003C18
Chromosome14 (Build37)
Map Location 97,190,856 - 97,355,058
singlet/doubletdoublet
Overlap geneLOC668654
Upstream gene4921530L21Rik, Klhl1, LOC100043366
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003C18.bB6Ng01-003C18.g
ACCDH840965DH840966
length1,0801,129
definitionDH840965|Mus musculus domesticus DNA, BAC clone: B6Ng01-003C18, 5' end.DH840966|Mus musculus domesticus DNA, BAC clone: B6Ng01-003C18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,190,856 - 97,191,739)(97,353,915 - 97,355,058)
sequence
gaattcccttgaacttgtgcagctactagccagcatttaatacacaggag
aggagaaaaagtggaacaactgagatgaaagcgtgaccccaaaaataatg
cctgacctcttaaatattgctagatcaattaatagtaaatgtatacatgc
aagaaatgaagaaaaatggaatagcaaaaggtatcaatgccaacacatat
attcaaactcttaagacaataaactagaatttcaagcattttaaaacatg
ctagatggaaacataacaatcagaatggtagataacattttatcacaaat
tagttacatgaggaaataatatttgtattttttgacaacaaaacaaaatc
aaacctgttaacctggtagtcccatacctcacacaaatgtcttttataaa
taacagagataaaaacctttacattaagcaatgaggaggcagagaactta
tcactatggcacattcaattcctcaaaatttgtcaagaaaatttcaccaa
taagaaaacgaaaaaataagctgaacttaacattataaagagtaaagatc
atagtatgggtatgggtaaatacaattggattttgttttccttttgattt
ttctaaagatgctaaagacgattctaatatcgcaatacagctgttcatgt
catgatatgagctctacacatgctcatataggaaatattttaaccactta
tataacaaagcatggcattaaaaaaataactgttgtacaaagttccatgc
atagatcacagtcagttataaatatcttgattacagaatagataagaata
ataaaaagaaattaaagcaatatgaacctagagtgcatctattaatatcc
aatggtaatttagagcaaagtatatgactatagtgagggaaaggcacata
atgtcaagtgaagagaccagagtaaccctgaatttctttagttgcaaggt
ttacgattacgactgatgcaacataactgaaactactcacccatatatta
gttacagttttacctcttcttactggaataattagtgaacgattagaaga
attaaaattatctagcgaactgagtcattc
gaattctgttttaagggagcaagtttcttagcaagacatttcacagtgaa
tggagtggtttcaataaacattttagtgtatacctattagtataagcaga
aagactatttttcacattttgtgattcttctcttatttaacataattcaa
gaaacacaacacacagacatacacacatacaccaacacatacaaacacgc
atttgcctgcaaacacacacatcgcacttgcaaatgcaaacatacattca
cacacactcacatacatacatacatagacacacaaatacacatataatcc
tgtgaacacacaaacacactttgacttttggcaactataaagaaaggtgt
ttttctggctggatttaggaatttccctgaggacacttggagaaaaatta
gaaaacaggagaaaaattagaaaacagtgagatttaaccagtgttaggaa
acaggaggaaagacacgatgaaataataccttttttgctctgaaaacatt
tttcttaggagcttttatgtatctttatttgctttcaattttttaaatga
agcaaagtgctaatttgtgtggtgtgtatgttatgataagagcatgttat
ggaaaatgaggaattaactcccttaaaggacagttgatctaggaagttgt
ttctaggagaaaaatgttttatcacatttgactttgttaatggtagttat
ggtttctgtttgtcttctgtttagcagaaattgcaacagacattactttc
gagtagtataagttttacatagcattttaagtatttttcattcaatgatt
aaacggagaatatctataaatgatacatttcaatatgttgcatgtaagta
aagggagcatattgtataaaaggacataactttcctgtattaatatattt
ataaattagattgcagagttatttatttttaccaaaggtttacatactgt
gtacatcctatttctattatacatgtttttttacaagggatttggatatt
tattcctcaatatcaccatatctgtgttatatattttcaattgactaaac
catttggatacttgaataacaattaataaaccaggaactgtttaagtact
taaaatccagtcctttgtaatctatgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97190856_97191739
seq2: B6Ng01-003C18.b_249_1116

seq1  AAGACAATAAACTAGAATTTCAAGCATTTTAAAACATGCTAGATGGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATAAACTAGAATTTCAAGCATTTTAAAACATGCTAGATGGAAAC  50

seq1  ATAACAATCAGAATGGTAGATAACATTTTATCACAAATTAGTTACATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATCAGAATGGTAGATAACATTTTATCACAAATTAGTTACATGAG  100

seq1  GAAATAATATTTGTATTTTTTGACAACAAAACAAAATCAAACCTGTTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATATTTGTATTTTTTGACAACAAAACAAAATCAAACCTGTTAAC  150

seq1  CTGGTAGTCCCATACCTCACACAAATGTCTTTTATAAATAACAGAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGTCCCATACCTCACACAAATGTCTTTTATAAATAACAGAGATAA  200

seq1  AAACCTTTACATTAAGCAATGAGGAGGCAGAGAACTTATCACTATGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTACATTAAGCAATGAGGAGGCAGAGAACTTATCACTATGGCAC  250

seq1  ATTCAATTCCTCAAAATTTGTCAAGAAAATTTCACCAATAAGAAAACGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTCCTCAAAATTTGTCAAGAAAATTTCACCAATAAGAAAACGAA  300

seq1  AAAATAAGCTGAACTTAACATTATAAAGAGTAAAGATCATAGTATGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGCTGAACTTAACATTATAAAGAGTAAAGATCATAGTATGGGTA  350

seq1  TGGGTAAATACAATTGGATTTTGTTTTCCTTTTGATTTTTCTAAAGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAATACAATTGGATTTTGTTTTCCTTTTGATTTTTCTAAAGATGC  400

seq1  TAAAGACAATTCTAATATCGCAATACAGCTGTTCATGTCATGATATGAGC  450
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACGATTCTAATATCGCAATACAGCTGTTCATGTCATGATATGAGC  450

seq1  TCTACACATGCTCATATAGGAAATATTTTAACCACTTATATAACAAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACATGCTCATATAGGAAATATTTTAACCACTTATATAACAAAGCA  500

seq1  TGGCATTAAAAAAATAACTGTTGTACAAAGTTCCATGCATAGATCACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTAAAAAAATAACTGTTGTACAAAGTTCCATGCATAGATCACAGT  550

seq1  CAGTTATAAATATCTTGATTACAGAATAGATAAGAATAATAAAAAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGTTATAAATATCTTGATTACAGAATAGATAAGAATAATAAAAAGAAA-  599

seq1  TTAAAAGCAAATATGAACCTAGAGTGCATCTATTAATATCCAATTGTAAT  650
       | ||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  -TTAAAGC-AATATGAACCTAGAGTGCATCTATTAATATCCAATGGTAAT  647

seq1  TTAAGAGCAAAGTATATGACTATAGTTAAGGAAAGGCAACATAATGTCAA  700
      || ||||||||||||||||||||||| | |||||||| ||||||||||||
seq2  TT-AGAGCAAAGTATATGACTATAGTGAGGGAAAGGC-ACATAATGTCAA  695

seq1  TTGTAAGAGACCAGAGTAACCCTGAATTTCTTTATATGCAAAGGTTTACA  750
       || ||||||||||||||||||||||||||||||  ||| ||||||||| 
seq2  GTG-AAGAGACCAGAGTAACCCTGAATTTCTTTAGTTGC-AAGGTTTACG  743

seq1  ATTACAACTGATACAACATAACTGAAAACTACTCAACCCCATAGTTTTAG  800
      ||||| |||||| ||||||||||| ||||||||||  |||||| | ||||
seq2  ATTACGACTGATGCAACATAACTG-AAACTACTCA--CCCATA-TATTAG  789

seq1  TTACAAGTTTTAACACTCTTCCTTACAGGAATAATAGGTGAACGATTAGA  850
      |||| |||||||   ||||| ||||| ||||||||  |||||||||||||
seq2  TTAC-AGTTTTA--CCTCTT-CTTACTGGAATAATTAGTGAACGATTAGA  835

seq1  AGAATTAAAATTATCTAACAGAACAGAGTCATTC  884
      ||||||||||||||||| | |||| |||||||||
seq2  AGAATTAAAATTATCTAGC-GAACTGAGTCATTC  868

seq1: chr14_97353915_97355058
seq2: B6Ng01-003C18.g_70_1198 (reverse)

seq1  TTGCATAGATTACAAGGGACTGGTTTTTTTTTTTTGTTTTTTTTTTAACA  50
      ||||||||||||||| ||||||| |||         |   |  || ||||
seq2  TTGCATAGATTACAAAGGACTGGATTT---------TAAGTACTTAAACA  41

seq1  TGTTTCTTGTTTTATTTATTTGTTATTTCAAGTTATCAAATGGTTTTAGT  100
       ||| || ||||   ||| |||||| |||||||   ||||||| ||||||
seq2  -GTTCCTGGTTT--ATTAATTGTTA-TTCAAGTATCCAAATGG-TTTAGT  86

seq1  CAATTTTGAAATATATAACACAAGATATGGTGATATTTGAGAATAAATAT  150
      ||| ||  ||||||||||||| |||||||||||||||   ||||||||||
seq2  CAA-TTGAAAATATATAACAC-AGATATGGTGATATTGAGGAATAAATAT  134

seq1  CCAAAATCCTTTGTAAAAAAACATGTATAATAGAAATAGGATGTACACAG  200
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CC-AAATCCCTTGTAAAAAAACATGTATAATAGAAATAGGATGTACACAG  183

seq1  TATGTAAACCTTTGGTAAAAATAAATAACTCTGCAATCTAATTTATAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAACCTTTGGTAAAAATAAATAACTCTGCAATCTAATTTATAAAT  233

seq1  ATATTAATACAGGAAAGTTATGTCCTTTTATACAATATGCT-CCTTTACT  299
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATATTAATACAGGAAAGTTATGTCCTTTTATACAATATGCTCCCTTTACT  283

seq1  TACATGCAACATATTG-AATGTATCATTTATAGATATTCTCCGTTTAATC  348
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TACATGCAACATATTGAAATGTATCATTTATAGATATTCTCCGTTTAATC  333

seq1  ATTGAATGAAAAATACTTAAAATGCTATGTAAAACTTATACTACTCGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGAAAAATACTTAAAATGCTATGTAAAACTTATACTACTCGAAA  383

seq1  GTAATGTCTGTTGCAATTTCTGCTAAACAGAAGACAAACAGAAACCATAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTCTGTTGCAATTTCTGCTAAACAGAAGACAAACAGAAACCATAA  433

seq1  CTACCATTAACAAAGTCAAATGTGATAAAACATTTTTCTCCTAGAAACAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATTAACAAAGTCAAATGTGATAAAACATTTTTCTCCTAGAAACAA  483

seq1  CTTCCTAGATCAACTGTCCTTTAAGGGAGTTAATTCCTCATTTTCCATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAGATCAACTGTCCTTTAAGGGAGTTAATTCCTCATTTTCCATAA  533

seq1  CATGCTCTTATCATAACATACACACCACACAAATTAGCACTTTGCTTCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCTTATCATAACATACACACCACACAAATTAGCACTTTGCTTCAT  583

seq1  TTAAAAAATTGAAAGCAAATAAAGATACATAAAAGCTCCTAAGAAAAATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATTGAAAGCAAATAAAGATACATAAAAGCTCCTAAGAAAAATG  633

seq1  TTTTCAGAGCAAAAAAGGTATTATTTCATCGTGTCTTTCCTCCTGTTTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAGCAAAAAAGGTATTATTTCATCGTGTCTTTCCTCCTGTTTCC  683

seq1  TAACACTGGTTAAATCTCACTGTTTTCTAATTTTTCTCCTGTTTTCTAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTGGTTAAATCTCACTGTTTTCTAATTTTTCTCCTGTTTTCTAAT  733

seq1  TTTTCTCCAAGTGTCCTCAGGGAAATTCCTAAATCCAGCCAGAAAAACAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCAAGTGTCCTCAGGGAAATTCCTAAATCCAGCCAGAAAAACAC  783

seq1  CTTTCTTTATAGTTGCCAAAAGTCAAAGTGTGTTTGTGTGTTCACAGGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTATAGTTGCCAAAAGTCAAAGTGTGTTTGTGTGTTCACAGGAT  833

seq1  TATATGTGTATTTGTGTGTCTATGTATGTATGTATGTGAGTGTGTGTGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTATTTGTGTGTCTATGTATGTATGTATGTGAGTGTGTGTGAA  883

seq1  TGTATGTTTGCATTTGCAAGTGCGATGTGTGTGTTTGCAGGCAAATGCGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTTGCATTTGCAAGTGCGATGTGTGTGTTTGCAGGCAAATGCGT  933

seq1  GTTTGTATGTGTTGGTGTATGTGTGTATGTCTGTGTGTTGTGTTTCTTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTATGTGTTGGTGTATGTGTGTATGTCTGTGTGTTGTGTTTCTTGA  983

seq1  ATTATGTTAAATAAGAGAAGAATCACAAAATGTGAAAAATAGTCTTTCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTTAAATAAGAGAAGAATCACAAAATGTGAAAAATAGTCTTTCTG  1033

seq1  CTTATACTAATAGGTATACACTAAAATGTTTATTGAAACCACTCCATTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACTAATAGGTATACACTAAAATGTTTATTGAAACCACTCCATTCA  1083

seq1  CTGTGAAATGTCTTGCTAAGAAACTTGCTCCCTTAAAACAGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAATGTCTTGCTAAGAAACTTGCTCCCTTAAAACAGAATTC  1129