BAC Information

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BAC

Clone NameB6Ng01-004K10
Chromosome14 (Build37)
Map Location 82,443,176 - 82,443,752
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004K10.bB6Ng01-004K10.g
ACCDH842002DH842003
length1,207860
definitionDH842002|Mus musculus domesticus DNA, BAC clone: B6Ng01-004K10, 5' end.DH842003|Mus musculus domesticus DNA, BAC clone: B6Ng01-004K10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcatctgattcagagctaccaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttctttttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cactttacttctgatagcttgccctgaatttcatctagaatccgccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacatta
gaaaaaattcaaggccaaacattttccactttacttctgatagactgtct
tgaatttccttagaaagttcaaggccaggcttacctcgtaaagctatact
cactggtactctcgttccccagctgaaaagttctgaattcatacagttga
atccttcttaacagtctgctttacgggaacctttattaccgcgacccgca
gttctggttctggaatgagggatcttccttgcgccagtcccgagtttctt
ctcgtcccggaatttctcgtcccggaattcggcaccaattgttattagac
gcgttctcacgaccggccaggaagaacaccacagaccagaatcttctgcg
gcaaaactttattgcttacatcttcaggagccagagtgcaagaagcaaga
gagcgagaaaacgaaaccccgtccctattaaggagaattatccttcgcct
aggacgtgtcactccctgattggctgcagcccatcggccgagttgacgtc
acggggaaggcagagcacatggagtggagaaccaccctcggcacatgcgc
agattatttgtttaccacttagaacacagctgtcagcgcatcttgtaacg
gcgaatgtggggcgcgctcccacatgggtattctgagctttgagctatat
cattatcagtagtacatatacgtatgtcttttctgatgatactcactcag
atgatattttctactcatcattgctagactcatttcttcatgtttatagc
cggatgaatcatgtgcaaatatacctctggatctatttgtccttcactcg
cactctatagcgtctgacttgggacatgttaccgtttatagggtggagaa
ctcttag
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctcagaagctctgtggctcttgtctggaaggaggc
cggccgtctggagctgaggttggcgccgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgccccagaa
tctctgcgactctctcgcccgtcccagaaacggctggcactctgtattcc
acacggtcacccgtgcagcctgccctccgcagagtcccggagccaagaaa
gctcccgccggcgcctgtgccacaaacctctcagctggcagacccccgtg
ctctcaccaggaagtggccggctgtctatttgtctcttgacatactgtgc
tacttagacctaaacatatagttttaaactcctcaggtgaatatgtggga
agggtaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82443176_82443752
seq2: B6Ng01-004K10.g_352_926

seq1  TTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAA  50

seq1  GGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGC  100

seq1  CCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGG  150

seq1  CCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTCAGAAGCTCTGTGGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTCAGAAGCTCTGTGGCTCT  200

seq1  TGTCTGGAAGGAGGCCGGCCGTCTGGAGCTGAGGTTGGCGCCGCCTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGAAGGAGGCCGGCCGTCTGGAGCTGAGGTTGGCGCCGCCTCAGA  250

seq1  AGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGAAGAT  300

seq1  GGCGCCGCCCCAGAATCTCTGCGACTCTCTCGCCCGTCCCAGAAACGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCCGCCCCAGAATCTCTGCGACTCTCTCGCCCGTCCCAGAAACGGCT  350

seq1  GGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCAGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCAGAGT  400

seq1  CCCGGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAACCTCTCAGG  450
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  CCCGGAGCCAAGAAAGCTCCCGCCGGCGCCTGTGCCACAAACCTCTCA-G  449

seq1  CTGGGCAGACCCCCGTGCTCTCACCAGGAAGGTGGCCGGCTGTCTTAATT  500
      || ||||||||||||||||||||||||||| ||||||||||||||  |||
seq2  CT-GGCAGACCCCCGTGCTCTCACCAGGAA-GTGGCCGGCTGTCT--ATT  495

seq1  TGTCTCTTGACATACTGTGCTAACTTAGACCTAAACATTATAGTTTTAAA  550
      ||||||||||||||||||||| ||||||||||||||| ||||||||||||
seq2  TGTCTCTTGACATACTGTGCT-ACTTAGACCTAAACA-TATAGTTTTAAA  543

seq1  CT-CTCA-GTGAATATGTGG---AGGTAATGG  577
      || |||| ||||||||||||    ||||||||
seq2  CTCCTCAGGTGAATATGTGGGAAGGGTAATGG  575