BAC Information

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BAC

Clone NameB6Ng01-005B06
Chromosome14 (Build37)
Map Location 66,658,640 - 66,783,786
singlet/doubletdoublet
Overlap geneAdam2, LOC100043675, Ephx2, Chrna2, Ptk2b
Upstream geneD14Ertd231e, Extl3, Fzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo
Downstream geneLOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005B06.bB6Ng01-005B06.g
ACCDH842315DH842316
length1,1491,136
definitionDH842315|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B06, 5' end.DH842316|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,782,630 - 66,783,786)(66,658,640 - 66,659,813)
sequence
gaattccagggctctagggatggatgagggtcctatggacttgagcacca
cccaaggctctgtgcagaggctctggttaggacctaggtggtcagtgaag
agggagcaggggcccatctgagctgtctgcatccatcattgccagccttg
aacctctccaaggctgtagcctgtgactcacaattccctgtgccactctc
ttgcatctgagtgggagctagcccagcctcctgcctttccttcccctcca
tccccttgaacggagttgtggcttgaaaatagaatatttcaaaagacaag
aaccaatgttagctttgctggtcctccagacaggaagagagagcctccca
accacactttccttgtcagggagatggccctgtgtcaaaaatcaagccca
gccaagaatggacgacaaattctctccacataaagaaaatgtcatgcagg
aggtgataaagagatatgtaggctgccacaatagtttagtgggtaaaggc
acttattgcctgagttcaatccctggaccccacatggtggaaggagaaga
ccaatgtccagaatttgttctctgacctccacaatcactatatgtcatgc
acccattcacacacacacacacacacacacacacacacacacacacacgt
acactaacaaaggttttaaaaaaaccatgtaaaatagcattgttagactg
gagagattaaaacacctgctgtaaaagtatgccagctgaagtttggagag
ccctgggacccacataaatgccaggtgagcatggtggctgtctggaacca
cagccttagaaggtggagacaaagaacccctcagagagaactggtgaatg
tttgacacaagctctcggtttgacattgagaccatgctttggtgaataat
gtaggatatgataaggatgactcctgacattcaatccagccccatgggta
ctcccccccacttgcccacacacacccccccacactcactattgtacagc
aactcacccaaaattgtaatagttttatcaagaatgattactccccggac
cccatttcatttattatctacttccatgcaccatttacctaccctcctcg
actccgagacctcgccacattggaagaaggagaatctttttttctgttg
gaattcagatccttgtgtctaagcaggaagtacttcacccactgagccat
ttccgcaagccaagactgctcattctttatataattaaggagatagcata
cagatttttaaaaattgaatacttatgggtgacaagtgcccccttgttga
aataaaaccctgagtggcaaaagacaggccaaaaattcaggccaaagtag
ttcaacctagacagcaacagcccaggtgtgtcggaaacaacacggagcct
ccttccgcacctctgacgtctgtcactagctagatatgtcaggctttgtg
gtcaggtgctagttggcttccgtgtgaaggtgactggggacattttcaag
ggtaaagtgacagaatctggtcacatttcctaaggcatacttaggtgggc
attccttgtatcccccagcagagattccacagctcccagatatgtcgctc
ttggaattcagctcccagaaacattcacttgaaccaaagcctgcatctgg
aagttaggcaaatgaaagagtgtcagtggcatcgagcgttttcatacctg
gaattaaaacaagggatgaagactttcgcagcttgaaaatggttttggaa
tgtattgcacaaaaggcaagcatcacatagaattgaagatggatggctca
gggatacacttccaacttcatgtacctggcagtgcctaatatgcaatgcc
aataacccaggcacagcaacaaaaagctaggtttttgtttttgttttggg
tttttgttttttaatgcaattgatattctggtgaataagtgggctttctt
tttcatacatgttttttcatcacactgttcaccaattgcttttggtctct
gagttttcctaggttcaattctcccagacccaactactttgagaacagtt
tctatttcaacctctgtccatgctctcttgtgaagcctctgatggggaca
tttgacaacttatgtgcttggctggaggaaagtgacctgtcacacagtca
tccttgggggccactagtgctaggagatggcagtgaccaagtcatatatc
attatgtctcagaattcattgcaattgttgtgggtagaaataagatttga
gcttgttagtaatcaactgtcttggaccgaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66782630_66783786
seq2: B6Ng01-005B06.b_45_1193 (reverse)

seq1  CAACAGAAAAATAGATCTCTCTCTC-TCATATGTGTGTGTGTGTCTGTGT  49
      ||||||||||| |||| ||||  || ||  ||||| | | | ||||  | 
seq2  CAACAGAAAAAAAGAT-TCTCCTTCTTCCAATGTG-GCGAG-GTCTCGGA  47

seq1  GTCTGTGTGTGTAAGTATATGTGTGCATGTGTGTATGTATATATATGTAT  99
      |||   | | ||| ||| ||| |||||||   |||  || ||| ||| | 
seq2  GTCGAGGAGGGTAGGTAAATG-GTGCATGGAAGTAGATA-ATAAATG-AA  94

seq1  ATGTGTGTCTGGGGTGTAATCA-TCTTGATTAAAACTTATTCCATTTTTG  148
      ||| | ||| |||| ||||||| |||||| |||||| |||| || |||||
seq2  ATG-GGGTCCGGGGAGTAATCATTCTTGA-TAAAAC-TATTACAATTTTG  141

seq1  TGTGTGTTTGCTGTACATTAGTGTGTGTGTGTGTGTGTGTTGTGTGCATG  198
       ||| | |||||||||| ||||| ||||| | | ||||| |||| ||| |
seq2  GGTGAG-TTGCTGTACAATAGTGAGTGTGGGGGGGTGTG-TGTGGGCAAG  189

seq1  TGTGTGTGAGTACACATGGGGCCTGGATTG-ATGTCAGGAGTCATCCTTT  247
      || | | |||||| ||||||| |||||||| |||||||||||||||| ||
seq2  TGGGGGGGAGTACCCATGGGG-CTGGATTGAATGTCAGGAGTCATCC-TT  237

seq1  ATCACTATCCTACCTTATTCACCAAAGCATGGTCTCAATGTCAAACCGAG  297
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATCA-TATCCTACATTATTCACCAAAGCATGGTCTCAATGTCAAACCGAG  286

seq1  AGCTTGTGTC-AACATTCACCAGTTCTCTCTG-GGGGTTCCTTGTCTCCA  345
      |||||||||| ||||||||||||||||||||| ||||||| |||||||||
seq2  AGCTTGTGTCAAACATTCACCAGTTCTCTCTGAGGGGTTCTTTGTCTCCA  336

seq1  CCTTCTAAGGCTGTGGTTCCAGACAGCCACCATGCTCACCTGGCATTTAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAAGGCTGTGGTTCCAGACAGCCACCATGCTCACCTGGCATTTAT  386

seq1  GTGGGTCCCAGGGCTCTCCAAACTTCAGCTGGCATACTTTTACAGCAGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCCCAGGGCTCTCCAAACTTCAGCTGGCATACTTTTACAGCAGGT  436

seq1  GTTTTAATCTCTCCAGTCTAACAATGCTATTTTACATGG-TTTTTTAAAA  494
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTTTTAATCTCTCCAGTCTAACAATGCTATTTTACATGGTTTTTTTAAAA  486

seq1  CCTTTGTTAGTGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTTAGTGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  536

seq1  TGTGTGAATGGGTGCATGACATATAGTGATTGTGGAGGTCAGAGAACAAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAATGGGTGCATGACATATAGTGATTGTGGAGGTCAGAGAACAAA  586

seq1  TTCTGGACATTGGTCTTCTCCTTCCACCATGTGGGGTCCAGGGATTGAAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACATTGGTCTTCTCCTTCCACCATGTGGGGTCCAGGGATTGAAC  636

seq1  TCAGGCAATAAGTGCCTTTACCCACTAAACTATTGTGGCAGCCTACATAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAATAAGTGCCTTTACCCACTAAACTATTGTGGCAGCCTACATAT  686

seq1  CTCTTTATCACCTCCTGCATGACATTTTCTTTATGTGGAGAGAATTTGTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATCACCTCCTGCATGACATTTTCTTTATGTGGAGAGAATTTGTC  736

seq1  GTCCATTCTTGGCTGGGCTTGATTTTTGACACAGGGCCATCTCCCTGACA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCTTGGCTGGGCTTGATTTTTGACACAGGGCCATCTCCCTGACA  786

seq1  AGGAAAGTGTGGTTGGGAGGCTCTCTCTTCCTGTCTGGAGGACCAGCAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTGTGGTTGGGAGGCTCTCTCTTCCTGTCTGGAGGACCAGCAAA  836

seq1  GCTAACATTGGTTCTTGTCTTTTGAAATATTCTATTTTCAAGCCACAACT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACATTGGTTCTTGTCTTTTGAAATATTCTATTTTCAAGCCACAACT  886

seq1  CCGTTCAAGGGGATGGAGGGGAAGGAAAGGCAGGAGGCTGGGCTAGCTCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCAAGGGGATGGAGGGGAAGGAAAGGCAGGAGGCTGGGCTAGCTCC  936

seq1  CACTCAGATGCAAGAGAGTGGCACAGGGAATTGTGAGTCACAGGCTACAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGATGCAAGAGAGTGGCACAGGGAATTGTGAGTCACAGGCTACAG  986

seq1  CCTTGGAGAGGTTCAAGGCTGGCAATGATGGATGCAGACAGCTCAGATGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAGAGGTTCAAGGCTGGCAATGATGGATGCAGACAGCTCAGATGG  1036

seq1  GCCCCTGCTCCCTCTTCACTGACCACCTAGGTCCTAACCAGAGCCTCTGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGCTCCCTCTTCACTGACCACCTAGGTCCTAACCAGAGCCTCTGC  1086

seq1  ACAGAGCCTTGGGTGGTGCTCAAGTCCATAGGACCCTCATCCATCCCTAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCTTGGGTGGTGCTCAAGTCCATAGGACCCTCATCCATCCCTAG  1136

seq1  AGCCCTGGAATTC  1157
      |||||||||||||
seq2  AGCCCTGGAATTC  1149

seq1: chr14_66658640_66659813
seq2: B6Ng01-005B06.g_69_1204

seq1  GAATTCAGATCCTTGTGTCTAAGCAGGAAGTACTTCACCCACTGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCCTTGTGTCTAAGCAGGAAGTACTTCACCCACTGAGCCAT  50

seq1  TTCCGCAAGCCAAGACTGCTCATTCTTTATATAATTAAGGAGATAGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGCAAGCCAAGACTGCTCATTCTTTATATAATTAAGGAGATAGCATA  100

seq1  CAGATTTTTAAAAATTGAATACTTATGGGTGACAAGTGCCCCCTTGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTTAAAAATTGAATACTTATGGGTGACAAGTGCCCCCTTGTTGA  150

seq1  AATAAAACCCTGAGTGGCAAAAGACAGGCCAAAAATTCAGGCCAAAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACCCTGAGTGGCAAAAGACAGGCCAAAAATTCAGGCCAAAGTAG  200

seq1  TTCAACCTAGACAGCAACAGCCCAGGTGTGTCGGAAACAACACGGAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCTAGACAGCAACAGCCCAGGTGTGTCGGAAACAACACGGAGCCT  250

seq1  CCTTCCGCACCTCTGACGTCTGTCACTAGCTAGATATGTCAGGCTTTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCGCACCTCTGACGTCTGTCACTAGCTAGATATGTCAGGCTTTGTG  300

seq1  GTCAGGTGCTAGTTGGCTTCCGTGTGAAGGTGACTGGGGACATTTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTGCTAGTTGGCTTCCGTGTGAAGGTGACTGGGGACATTTTCAAG  350

seq1  GGTAAAGTGACAGAATCTGGTCACATTTCCTAAGGCATACTTAGGTGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGTGACAGAATCTGGTCACATTTCCTAAGGCATACTTAGGTGGGC  400

seq1  ATTCCTTGTATCCCCCAGCAGAGATTCCACAGCTCCCAGATATGTCGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGTATCCCCCAGCAGAGATTCCACAGCTCCCAGATATGTCGCTC  450

seq1  TTGGAATTCAGCTCCCAGAAACATTCACTTGAACCAAAGCCTGCATCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTCAGCTCCCAGAAACATTCACTTGAACCAAAGCCTGCATCTGG  500

seq1  AAGTTAGGCAAATGAAAGAGTGTCAGTGGCATCGAGCGTTTTCATACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGGCAAATGAAAGAGTGTCAGTGGCATCGAGCGTTTTCATACCTG  550

seq1  GAATTAAAACAAGGGATGAAGACTTTCGCAGCTTGAAAATGGTTTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAACAAGGGATGAAGACTTTCGCAGCTTGAAAATGGTTTTGGAA  600

seq1  TGTATTGCACAAAAGGCAAGCATCACATAGAATTGAAGATGGATGGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGCACAAAAGGCAAGCATCACATAGAATTGAAGATGGATGGCTCA  650

seq1  GGGATACACTTCCAACTTCATGTACCTGGCAGTGCCTAATATGCAATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACACTTCCAACTTCATGTACCTGGCAGTGCCTAATATGCAATGCC  700

seq1  AATAACCCCAGGCACAGCAACAAAAAGCTAGGTTTTTGTTTTTTGTTTTT  750
      ||||| |||||||||||||||||||||||||||||||| |||||||||| 
seq2  AATAA-CCCAGGCACAGCAACAAAAAGCTAGGTTTTTG-TTTTTGTTTTG  748

seq1  GGTTTTTTGTTTTTTTAATGCAATTGATATTCTGGTGAATAAGGTGGGCT  800
      |||||||   |||||||||||||||||||||||||||||||| |||||||
seq2  GGTTTTT--GTTTTTTAATGCAATTGATATTCTGGTGAATAA-GTGGGCT  795

seq1  TTCTTTTTTCATACATGTTTTTTCAATCACACTGTTCACCAATTGCTTTT  850
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTC-TTTTTCATACATGTTTTTTC-ATCACACTGTTCACCAATTGCTTTT  843

seq1  TGTCTCTGAGTTTTCCTAGTTTCAATTCTCCCAAGACCCAAACTACTTTG  900
       |||||||||||||||||| |||||||||||| |||||| ||||||||||
seq2  GGTCTCTGAGTTTTCCTAGGTTCAATTCTCCC-AGACCC-AACTACTTTG  891

seq1  AGAACAGTTTCTATTTTCAACCTCTGTCCATGCTACTCTTGTTGAAGCCT  950
      ||||||||||||| |||||||||||||||||||| |||||| ||||||||
seq2  AGAACAGTTTCTA-TTTCAACCTCTGTCCATGCT-CTCTTG-TGAAGCCT  938

seq1  CTGATGGGGACATTTGACAAC-TATGTTGCTGGGCTGGAGGAAAGTGACC  999
      ||||||||||||||||||||| |||| |||| ||||||||||||||||||
seq2  CTGATGGGGACATTTGACAACTTATG-TGCTTGGCTGGAGGAAAGTGACC  987

seq1  TGTCACAACAG-CATCCCTGGGGGCTCAACTAGGTTGCCTAGAGATGCCA  1048
      |||||| |||| ||||| ||||||  | |||||  |||   |||||| ||
seq2  TGTCAC-ACAGTCATCCTTGGGGG--CCACTAG--TGCTAGGAGATGGCA  1032

seq1  GTGAACCCAAAGTTCATTATATTCATTATGTCTCAGAATCCATTTGCCAA  1098
      ||||  ||||   ||| |||| ||||||||||||||||| || ||||   
seq2  GTGA--CCAA--GTCA-TATA-TCATTATGTCTCAGAATTCA-TTGC---  1072

seq1  ATTTGTTGTGGGTAAGAAATAAAGATTTTTGAGCTTGGTTAGGGAATCCA  1148
      | ||||||||||| |||||| ||||  ||||||||| |||| | ||| ||
seq2  AATTGTTGTGGGT-AGAAAT-AAGA--TTTGAGCTT-GTTA-GTAAT-CA  1115

seq1  ACTGTTCTTTGTGGACCAGAAAAAAA  1174
      |||| |||   |||||| ||||||||
seq2  ACTG-TCT---TGGACC-GAAAAAAA  1136