BAC Information

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BAC

Clone NameB6Ng01-005F21
Chromosome14 (Build37)
Map Location 74,474,095 - 74,475,212
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
Downstream geneLOC629583, Htr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005F21.bB6Ng01-005F21.g
ACCDH842521DH842522
length1,0961,103
definitionDH842521|Mus musculus domesticus DNA, BAC clone: B6Ng01-005F21, 5' end.DH842522|Mus musculus domesticus DNA, BAC clone: B6Ng01-005F21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctcatatggatcaaagtccaaatggaagaaaatgtgggtgc
ttctaacaatgatgcacccttaattactgtaatgttctgcagtcttaaaa
tcccctggctgctaggctgatcctggagcaaatatctgagtagttagaaa
gataattaactttgatataaatatgaatgacatgacctgggttcttagac
ttagattcctccaaatgacttgcttcagtatgaaagcagttgatagtcac
agagccaaagaaatgtgcaaatcaatatgtttaccaaatacatgggtggg
acatacaataggctggtcacagtggagtgagaaactctcttccttaagtt
tctgatgctatctgatgacattcttagcttgaaggcttgtgtgagctagt
gctctgttatgttaatacattctagagattttacctccttgctggaaggg
tcttaggtcaaacaccaaagtgaatgataaatggctagtaagcaaagaaa
agatatcacaaaatgattttggctccttttctacaacattcaaacactca
gctatcaggaaggttataatcaaccagtctacagaagtctatgtgaggtc
tgtgaggtctttttaggtaatttcccacattatctgcccttcttaaacat
tcatgctgccactgatgctttccatactgtatgagaatcagtgtgctgct
cactgctggaaaagacacaggaggtggattcaaccctgaacaacctgccc
acactctgagattctcagtcataatggtttggacttaaattataggagcc
aggattctcacattcactctatcttcagtgtccaagtaagtcctggacaa
atgacactcaaagccaaacagacattatttttaaatatgaactatttcca
cttcattaaaagaaacatgcagtatagaggactattgtcaagtaaagaaa
cacacaccatgaaagatacatgatagtttacgctactgctatcagcagca
tgtcctgggactcctgcagacatagcatcctctcagtcatgattatgagt
tgcatgtcgactatgacttttaagcttctgaagctgtcatcaaatg
gaattcactaggagtcattttattgtcatgtttctttagcagaagagtaa
tacttggtttcccacctaggtcctttggctatctactctcagattcttgg
tcaaccaagcaatgtaaggtatgagttctatctcacagagtgggtattca
gtcaaatcaggtattagttgattattctcacaagcttgtgcccaccccct
cttatactagaacatcttgcaggaaggacaccatgtgcataaagggtttg
tggctgggttggtgtttatgtttgttttttagaaggattctgattacctt
ctagtatgaagaacactagaatttagggatgaaggctctatataggcacc
agttcaacttctccatgttcagccagttgtataggtgttaaattcagcaa
tagagtcttgctgaaagtttgtggagagcaatctatagtcttggcaacag
cctgggttgtttgtggattgctatgagaccgctttgtccaacaactcaat
tagatgtaacagatacctgttatagaagcttcatttagtgacaagagatg
ttggggctgtgtctccctgttacttggtgatttcatttagatcaccttca
aaaatgtatttattttaggaagcttctacaatattatgtttccatactac
tcaaatggcccttaattttagctgcctctccccatattccttgccttatt
ctttcctcctccctgcttaatcatctagtcccagtctcctccagccctga
tccatccatgaccatttatccatttcccctttctagggagacctatccgt
tccctgctttgctcctttgctttgtacatgacctctgtatcagccagctc
attatagactcaacagcttatatctacttataaacaaatacatgccgtat
ttgtctttctaaatctgggttacctcgctcaggattgcttttgtcaagat
ctatccatttatctatatatataatgatttcatattagaaaaagaattag
taatacctccattgataaaatataccacattttctttgtctactcaatgg
ctggagggaacaaactagggttgtttccatattttgtgctggtatgtgta
taa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74474095_74475212
seq2: B6Ng01-005F21.b_43_1138 (reverse)

seq1  CATTTGATTGACAGCTTCAGGAAGCTTAAAAGTCCATAGGTCTGACATGC  50
      ||||||| ||||||||||| ||||||||||||| |||| ||| |||||||
seq2  CATTTGA-TGACAGCTTCA-GAAGCTTAAAAGT-CATA-GTC-GACATGC  45

seq1  TACCTTCATAAATCATGACTGAGAGGATGCTATGTCTGCAGGAGTTCCCA  100
       ||  |||| |||||||||||||||||||||||||||||||||| |||||
seq2  AAC--TCAT-AATCATGACTGAGAGGATGCTATGTCTGCAGGAG-TCCCA  91

seq1  GGACATGCTGCTGATAAGGCAAGTAGCCGTAAACTATCATTGTTATCTTT  150
      ||||||||||||||||  || ||||| |||||||||||||   |||| ||
seq2  GGACATGCTGCTGATA--GC-AGTAG-CGTAAACTATCAT--GTATC-TT  134

seq1  TCATGGTGTGGTGTTTTCTTTTACTTTGACAATAGTTCCTCTATACTGCA  200
      ||||||||| ||||||   ||||| |||||||||| ||||||||||||||
seq2  TCATGGTGT-GTGTTT--CTTTAC-TTGACAATAG-TCCTCTATACTGCA  179

seq1  TGTTTCTTTTAATGAAGTGGAAATAGTTCATATTTTAAAAATAATGTCTG  250
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTTTCTTTTAATGAAGTGGAAATAGTTCATA-TTTAAAAATAATGTCTG  228

seq1  TTTGGCTTTGAGTGTCATTTGTCCAGGACTTACTTGGACACTGAAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTGAGTGTCATTTGTCCAGGACTTACTTGGACACTGAAGATAG  278

seq1  AGTGAATGTGAGAATCCTGGCTCCTATAATTTAAGTCCAAACCATTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATGTGAGAATCCTGGCTCCTATAATTTAAGTCCAAACCATTATGA  328

seq1  CTGAGAATCTCAGAGTGTGGGCAGGTTGTTCAGGGTTGAATCCACCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATCTCAGAGTGTGGGCAGGTTGTTCAGGGTTGAATCCACCTCCT  378

seq1  GTGTCTTTTCCAGCAGTGAGCAGCACACTGATTCTCATACAGTATGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTTCCAGCAGTGAGCAGCACACTGATTCTCATACAGTATGGAAA  428

seq1  GCATCAGTGGCAGCATGAATGTTTAAGAAGGGCAGATAATGTGGGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGTGGCAGCATGAATGTTTAAGAAGGGCAGATAATGTGGGAAATT  478

seq1  ACCTAAAAAGACCTCACAGACCTCACATAGACTTCTGTAGACTGGTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAAAGACCTCACAGACCTCACATAGACTTCTGTAGACTGGTTGAT  528

seq1  TATAACCTTCCTGATAGCTGAGTGTTTGAATGTTGTAGAAAAGGAGCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCTTCCTGATAGCTGAGTGTTTGAATGTTGTAGAAAAGGAGCCAA  578

seq1  AATCATTTTGTGATATCTTTTCTTTGCTTACTAGCCATTTATCATTCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTTGTGATATCTTTTCTTTGCTTACTAGCCATTTATCATTCACT  628

seq1  TTGGTGTTTGACCTAAGACCCTTCCAGCAAGGAGGTAAAATCTCTAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTTGACCTAAGACCCTTCCAGCAAGGAGGTAAAATCTCTAGAAT  678

seq1  GTATTAACATAACAGAGCACTAGCTCACACAAGCCTTCAAGCTAAGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAACATAACAGAGCACTAGCTCACACAAGCCTTCAAGCTAAGAATG  728

seq1  TCATCAGATAGCATCAGAAACTTAAGGAAGAGAGTTTCTCACTCCACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGATAGCATCAGAAACTTAAGGAAGAGAGTTTCTCACTCCACTGT  778

seq1  GACCAGCCTATTGTATGTCCCACCCATGTATTTGGTAAACATATTGATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCCTATTGTATGTCCCACCCATGTATTTGGTAAACATATTGATTT  828

seq1  GCACATTTCTTTGGCTCTGTGACTATCAACTGCTTTCATACTGAAGCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTCTTTGGCTCTGTGACTATCAACTGCTTTCATACTGAAGCAAG  878

seq1  TCATTTGGAGGAATCTAAGTCTAAGAACCCAGGTCATGTCATTCATATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGGAGGAATCTAAGTCTAAGAACCCAGGTCATGTCATTCATATTT  928

seq1  ATATCAAAGTTAATTATCTTTCTAACTACTCAGATATTTGCTCCAGGATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAAGTTAATTATCTTTCTAACTACTCAGATATTTGCTCCAGGATC  978

seq1  AGCCTAGCAGCCAGGGGATTTTAAGACTGCAGAACATTACAGTAATTAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGCAGCCAGGGGATTTTAAGACTGCAGAACATTACAGTAATTAAG  1028

seq1  GGTGCATCATTGTTAGAAGCACCCACATTTTCTTCCATTTGGACTTTGAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATCATTGTTAGAAGCACCCACATTTTCTTCCATTTGGACTTTGAT  1078

seq1  CCATATGAGAAAGAATTC  1118
      ||||||||||||||||||
seq2  CCATATGAGAAAGAATTC  1096