BAC Information

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BAC

Clone NameB6Ng01-005H03
Chromosome14 (Build37)
Map Location 81,770,630 - 81,771,655
singlet/doubletsinglet
Overlap geneLOC639207
Upstream geneLOC672828
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005H03.bB6Ng01-005H03.g
ACCDH842579DH842580
length1,0231,234
definitionDH842579|Mus musculus domesticus DNA, BAC clone: B6Ng01-005H03, 5' end.DH842580|Mus musculus domesticus DNA, BAC clone: B6Ng01-005H03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaacccagagaggtttgatcctagtcactttctagatgggaa
tggcaagtttaagaaagatgactactttttttttcctttctcaacaggaa
aatagatttgtgtgggagagcatcttgaccaaacagaatgatttttatca
ctgagtaccattttacagaacttgaactgaaatctccagttgatatgaaa
gaccttgaaaccaccccagttgccagtgaactagtttatgagccaccaaa
tttccaggtatgcttcattcatgtctaaatttatttccccctaaagccct
ttcattgtggacataaatgactcatcaggcatgccactctaaccccacct
cctgagttctgggattccatatatataatgcacaaattgatccattgcct
ttcctttttcataagacaagcagtaacaaattgaagtaatgtcccaaggt
gatttttgttttttttttatcataatacatataaagaaagcatgacatct
ttgactttttatctcttaaaggtacaagaaatgcctatcttctattgtag
gcaatttttaggataactgtaaaacaagtctgcaactctctatgctgtca
atgatttattgacttcagcattgttagtccttatctaaaggtgaattatt
aatacattattactgtaagactgagaaatgtgagttttaaaactgtatgt
tttaaataatagtattataattctgataaagaattactgtgggtgagtat
tgagaatgtatttgcacttatttgtaaagaaaatatttgagactatgtaa
gatataagtatcattctaggacacagtcaagatagtcagcattgtcattg
gaatttgatcgatattagtcttagacacataacagtcaaaacctatgtgt
tctaaaaaagtgacttcagtttgtaacctgacacaataatgaaatctgtt
gtaagatttacatccagttcacatatatgctaagtatatattgtggttat
tctttaaagattcagtttgctct
gaattctataagaactccaaagaagatataagaacaagactctcaaccta
ttccacaacttataaacagaagaaatattacctaattcattttatgtacc
cactgttacaatgatacctaaaccacacaaagacccaagacaaaaagaga
acttcagaacaattttgcttatgaatattggtgcaaaatactcaataaaa
atcttgtaaattgaatataagaacacatcaaaatcatcattcaccaagat
caagtaggcttcaacacagggatgtaggaatggagggatggttcaatata
caaattacatcaacataatttactatatatatgaactcaaagaaaaaaat
cacatgatcatattattggatgctgaaaaagcctttaaaaatatacaaca
cctcttcatgttaaaattcttggaaacaacaggaattgaaggctcatatc
taaacataataaaaacaatatatatagcaaacaaacagccaacatgaaat
taaatggagagaaacttgaagcaatcccactaaaatcagggacaaggcaa
gggttcccactctctacttacttactcaatatagttttagaagttttaca
actcaaagttaggcaaccaaataaggtcaaaggtatacacataggaaagg
aagaagtcaagtatcactatgcatacatgattgtatgtataagtaatcct
taagattctaccagggaactcaaacacttggtaaacaacttcaattaagt
ttctggatataaaattaactcaaactaatcagtaactttcctctacacaa
ggataaatgggctgagaaagaaaatagggaacaacaaccttctcaatagt
cacaaataatataaaatatcttgatgtaactctaaccaattaagtgaaag
atctgcatgacaagaacttcaagtctctgaagaaagaaatcaaagaagac
ctcagataatggaaagatcttcgtgctcatgcattggtaagtttaacatg
gtagaaatgcattttaaagaaagaaaactgcagatcaatgtatctcatct
gaatccacacaattttcaaggacatgaaaagaacattttcattgattgga
aaaatgaaattcagaaagtgggaaacattctttaacataaaggacgtttg
gtgaattacgacattctggactcagctatctatctgaggaataggtaata
attgtctagggatagttgtgcgcagaagcatcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81770630_81771655
seq2: B6Ng01-005H03.b_46_1068

seq1  GAATTCTCCAACCCAGAGAGGTTTGATCCTAGTCACTTTCTAGATGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAACCCAGAGAGGTTTGATCCTAGTCACTTTCTAGATGGGAA  50

seq1  TGGCAAGTTTAAGAAAGATGACTACTTTTTTTTTCCTTTCTCAACAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGTTTAAGAAAGATGACTACTTTTTTTTTCCTTTCTCAACAGGAA  100

seq1  AATAGATTTGTGTGGGAGAGCATCTTGACCAAACAGAATGATTTTTATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTTGTGTGGGAGAGCATCTTGACCAAACAGAATGATTTTTATCA  150

seq1  CTGAGTACCATTTTACAGAACTTGAACTGAAATCTCCAGTTGATATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTACCATTTTACAGAACTTGAACTGAAATCTCCAGTTGATATGAAA  200

seq1  GACCTTGAAACCACCCCAGTTGCCAGTGAACTAGTTTATGAGCCACCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGAAACCACCCCAGTTGCCAGTGAACTAGTTTATGAGCCACCAAA  250

seq1  TTTCCAGGTATGCTTCATTCATGTCTAAATTTATTTCCCCCTAAAGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGTATGCTTCATTCATGTCTAAATTTATTTCCCCCTAAAGCCCT  300

seq1  TTCATTGTGGACATAAATGACTCATCAGGCATGCCACTCTAACCCCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGTGGACATAAATGACTCATCAGGCATGCCACTCTAACCCCACCT  350

seq1  CCTGAGTTCTGGGATTCCATATATATAATGCACAAATTGATCCATTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTTCTGGGATTCCATATATATAATGCACAAATTGATCCATTGCCT  400

seq1  TTCCTTTTTCATAAGACAAGCAGTAACAAATTGAAGTAATGTCCCAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTCATAAGACAAGCAGTAACAAATTGAAGTAATGTCCCAAGGT  450

seq1  GATTTTTGTTTTTTTTTTATCATAATACATATAAAGAAAGCATGACATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGTTTTTTTTTTATCATAATACATATAAAGAAAGCATGACATCT  500

seq1  TTGACTTTTTATCTCTTAAAGGTACAAGAAATGCCTATCTTCTATTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTTTATCTCTTAAAGGTACAAGAAATGCCTATCTTCTATTGTAG  550

seq1  GCAATTTTTAGGATAACTGTAAAACAAGTCTGCAACTCTCTATGCTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTTTAGGATAACTGTAAAACAAGTCTGCAACTCTCTATGCTGTCA  600

seq1  ATGATTTATTGACTTCAGCATTGTTAGTCCTTATCTAAAGGTGAATTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTATTGACTTCAGCATTGTTAGTCCTTATCTAAAGGTGAATTATT  650

seq1  AATACATTATTACTGTAAGACTGAGAAATGTGAGTTTTAAAACTGTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTATTACTGTAAGACTGAGAAATGTGAGTTTTAAAACTGTATGT  700

seq1  TTTAAATAATAGTATTATAATTCTGATAAAGAATTACTGTGGGTGAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAATAGTATTATAATTCTGATAAAGAATTACTGTGGGTGAGTAT  750

seq1  TGAGAATGTATTTGCACTTATTTGTAAAGAAAATATTTGAGACTATGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGTATTTGCACTTATTTGTAAAGAAAATATTTGAGACTATGTAA  800

seq1  GATATAAGTATCATTCTAGGACACAGTCAAGATAGTCAGCATTGTCATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAGTATCATTCTAGGACACAGTCAAGATAGTCAGCATTGTCATTG  850

seq1  GAATTTGATCGATATTAGTCTTAGACACATAACAGTCAAAACCTATGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGATCGATATTAGTCTTAGACACATAACAGTCAAAACCTATGTGT  900

seq1  TCTAAAAAAAGTGACTTCAGTTTGTAACCTGACACAATAATGAAATCTGT  950
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCT-AAAAAAGTGACTTCAGTTTGTAACCTGACACAATAATGAAATCTGT  949

seq1  TGTAAGATTTACATCCAGTTCAACATATATGCTAAGTATATATTGTGGTT  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTAAGATTTACATCCAGTTC-ACATATATGCTAAGTATATATTGTGGTT  998

seq1  ATTCTTTAAAGATTCAGTTTTGCTCT  1026
      ||||||||||||||||| ||||||||
seq2  ATTCTTTAAAGATTCAG-TTTGCTCT  1023