BAC Information

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BAC

Clone NameB6Ng01-006G22
Chromosome14 (Build37)
Map Location 106,495,795 - 106,497,062
singlet/doubletsinglet
Overlap genenone
Upstream geneRbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2, EG621364
Downstream geneLOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006G22.bB6Ng01-006G22.g
ACCDH843293DH843294
length1,229475
definitionDH843293|Mus musculus domesticus DNA, BAC clone: B6Ng01-006G22, 5' end.DH843294|Mus musculus domesticus DNA, BAC clone: B6Ng01-006G22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtagatattattccactcctccccttctctctctctctctgg
attgctgcttctgatgtcaccttccactttgatacatacgtatggagatg
ggaaaacaggagagtcagaacagaagaatgtgatctgggcattacagaag
gaagatctcgagttcaatggtagaaatgtaaatctacctaaaagtaaaaa
ggagctctggacctacctgaggaaacctcaaagaagccagagcttgtgga
aaaaaaaaatccgagttgggaatttatgtcttttcttcaataagtagact
gtgtatctctaatgtaacattgtgaatctctctgataataaaatagtcta
aatgccataattcttgtatttcataatctattacacaagtccaggctgtg
aaatttgtatggccatctgtgatgatggaataatttcaaactacaacata
tggtattctctcagctgccgtgtagtcaattggaacctcacttggcccat
cttgtatgtgggatctatcacccctttcgctctcaataatactatttgtt
gtccaacagtatctattattctgccagtcactggcagttcttacgtcttt
tagccattcaacaacacccactgtgcactattttctattgctcccatttc
cgctaaaataactatacctgcttctactatttgtttttgaaatttaatgt
ccatagaaaactctattataaggttggagagatggcttagtggttcaaag
cacttgacccttttacagaagacctggctggttcctaacacccacatggt
gacttcaaaccactgaactgcagtgctaaggactccgatgctctcttctg
actgccaggagcaccagaaaggcacagaaatacatgtgggcaaagtattc
tacaaaataataaaagaaataaatataaagagaagagaaatgacctgtac
agcttttatagaacacagaggagcttcttccccagttagttgttttccca
attgccccatgaaaagacaaatttgagttacctaagctatgacatggatt
atctaattatcatggcggaggaaccgacgaaccaccaaacaacccccccc
ccaacctctcggtcaccaaaacagacaagaaactaaatcaagagctgtca
gacaacttctggtaagatggcatcaggattgaccttagatttcagggact
gacactttacagaactcttacattctggc

cctcaaaagaggaggcagaaaaggaggcaaaaaatgtgtaacaaccagag
atgaaggacaccagaagagtccctctaaaagaaccaagcaaagctcacat
aaacttagagactaaacccccaagcacaggacctatatgggtctggacca
ggtcctctctgtatatgttataactttcagcttagtgtttttacgggatt
cctgagtatgcaaaggagtgggcctctgatgcttgtacctattcttcgtt
gggttgccttgtcaaagttcaatgttatgattgttggcttattttatatt
ttattttgttatattttgttgttatctcccaaaagtcttttcttttctaa
tgtgacagaaagaaatcagatccaggtgggaggggagatggggaggaaca
gggaggaggacacgacagggaaaactgtaattgggatatattgtgagaaa
ttaaaattatctacttttaataaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106495795_106497062
seq2: B6Ng01-006G22.b_42_1270

seq1  GAATTCCTGTAGATATTATTCCACTCCTCCCCTTCTCTCTCTCTCTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTAGATATTATTCCACTCCTCCCCTTCTCTCTCTCTCTCTGG  50

seq1  ATTGCTGCTTCTGATGTCACCTTCCACTTTGATACATACGTATGGAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGCTTCTGATGTCACCTTCCACTTTGATACATACGTATGGAGATG  100

seq1  GGAAAACAGGAGAGTCAGAACAGAAGAATGTGATCTGGGCATTACAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAGGAGAGTCAGAACAGAAGAATGTGATCTGGGCATTACAGAAG  150

seq1  GAAGATCTCGAGTTCAATGGTAGAAATGTAAATCTACCTAAAAGTAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCTCGAGTTCAATGGTAGAAATGTAAATCTACCTAAAAGTAAAAA  200

seq1  GGAGCTCTGGACCTACCTGAGGAAACCTCAAAGAAGCCAGAGCTTGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTGGACCTACCTGAGGAAACCTCAAAGAAGCCAGAGCTTGTGGA  250

seq1  AAAAAAAAATCCGAGTTGGGAATTTATGTCTTTTCTTCAATAAGTAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATCCGAGTTGGGAATTTATGTCTTTTCTTCAATAAGTAGACT  300

seq1  GTGTATCTCTAATGTAACATTGTGAATCTCTCTGATAATAAAATAGTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCTCTAATGTAACATTGTGAATCTCTCTGATAATAAAATAGTCTA  350

seq1  AATGCCATAATTCTTGTATTTCATAATCTATTACACAAGTCCAGGCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCATAATTCTTGTATTTCATAATCTATTACACAAGTCCAGGCTGTG  400

seq1  AAATTTGTATGGCCATCTGTGATGATGGAATAATTTCAAACTACAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTATGGCCATCTGTGATGATGGAATAATTTCAAACTACAACATA  450

seq1  TGGTATTCTCTCAGCTGCCGTGTAGTCAATTGGAACCTCACTTGGCCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCTCTCAGCTGCCGTGTAGTCAATTGGAACCTCACTTGGCCCAT  500

seq1  CTTGTATGTGGGATCTATCACCCCTTTCGCTCTCAATAATACTATTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGTGGGATCTATCACCCCTTTCGCTCTCAATAATACTATTTGTT  550

seq1  GTCCAACAGTATCTATTATTCTGCCAGTCACTGGCAGTTCTTACGTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACAGTATCTATTATTCTGCCAGTCACTGGCAGTTCTTACGTCTTT  600

seq1  TAGCCATTCAACAACACCCACTGTGCACTATTTTCTATTGCTCCCATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATTCAACAACACCCACTGTGCACTATTTTCTATTGCTCCCATTTC  650

seq1  CGCTAAAATAACTATACCTGCTTCTACTATTTGTTTTTGAAATTTAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAAAATAACTATACCTGCTTCTACTATTTGTTTTTGAAATTTAATGT  700

seq1  CCATAGAAAACTCTATTATAAGGTTGGAGAGATGGCTTAGTGGTTCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGAAAACTCTATTATAAGGTTGGAGAGATGGCTTAGTGGTTCAAAG  750

seq1  CACTTGACCCTTTTACAGAAGACCTGGCTGGTTCCTAACACCCACATGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGACCCTTTTACAGAAGACCTGGCTGGTTCCTAACACCCACATGGT  800

seq1  GACTTCAAACCACTGAACTGCAGTGCTAAGGACTCCGATGCTCTCTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAAACCACTGAACTGCAGTGCTAAGGACTCCGATGCTCTCTTCTG  850

seq1  ACTGCCAGGAGCACCAGAAAGGCACAGAAATACATGTGGGCAAGGTATTC  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTGCCAGGAGCACCAGAAAGGCACAGAAATACATGTGGGCAAAGTATTC  900

seq1  ATACAAAAATAATAAAAGAAATAAATATAAAGAGAAGAGAAAATGACCTG  950
       ||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  -TAC-AAAATAATAAAAGAAATAAATATAAAGAGAAGAG-AAATGACCTG  947

seq1  TACAGCTTTTATAGAACACAGAGGAGCTTC-TCCCCAGTTAGTTGTTTTC  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TACAGCTTTTATAGAACACAGAGGAGCTTCTTCCCCAGTTAGTTGTTTTC  997

seq1  CAGATTGCCACATGAAAAGAC-AATTTGAGTTACCTAAGCTATGACATGG  1048
      |  |||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  CCAATTGCCCCATGAAAAGACAAATTTGAGTTACCTAAGCTATGACATGG  1047

seq1  A-TATCATATTATCATGGCGAAGAAAAACAAAAACAAAAACAACCAAACC  1097
      | ||||  |||||||||||| ||       ||   |  ||| ||||||| 
seq2  ATTATCTAATTATCATGGCGGAG------GAACCGACGAACCACCAAACA  1091

seq1  AACCCCCCCCCCACCCCCCGCCACCCACACACAGACAAGAAAACTTTAAT  1147
      | ||||||||| ||| | ||    ||| | ||||||||| |||||   | 
seq2  ACCCCCCCCCCAACCTCTCGGTCACCA-AAACAGACAAG-AAACT---AA  1136

seq1  ACAAAGAGCTGTCAAGGACTACCTTTCTTGATAAAGTATTGGCTATTTAG  1197
      |  |||||||||||  ||| ||  |||| |  | |    ||||     | 
seq2  ATCAAGAGCTGTCA--GACAAC--TTCTGGTAAGA----TGGC-----AT  1173

seq1  AAGGTATTTAAAACTTTAAGGATTTTCTAGGGGAAACTGACAATCTTACA  1247
       ||| |||    || |||  |||||   ||||   ||||||| | |||| 
seq2  CAGG-ATT---GACCTTA--GATTT--CAGGG---ACTGACACT-TTAC-  1210

seq1  AGAACTCTTAACATTCCTGGC  1268
      ||||||||| ||||| |||||
seq2  AGAACTCTT-ACATT-CTGGC  1229


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