BAC Information

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BAC

Clone NameB6Ng01-007I24
Chromosome14 (Build37)
Map Location 96,257,091 - 96,410,288
singlet/doubletdoublet
Overlap gene4921530L21Rik
Upstream geneLOC677613, LOC100043784, LOC382931
Downstream geneKlhl1, LOC100043366, LOC668654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007I24.bB6Ng01-007I24.g
ACCDH844093DH844094
length872893
definitionDH844093|Mus musculus domesticus DNA, BAC clone: B6Ng01-007I24, 5' end.DH844094|Mus musculus domesticus DNA, BAC clone: B6Ng01-007I24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,257,091 - 96,257,957)(96,409,397 - 96,410,288)
sequence
gaattctcaaagctcttcctaagttccaaaagaatctcaaaggagagaag
ctgtcactgtcattattcctcttcactaaagaatcatgtaggatcataat
ttactgtaggaaattcacttgataaggtttgaaatgccacgattttatca
tttaaatttggaaagaatcttggggatagagtggtaactccaactgtaag
agaacacactgctcttgaagagaacccaagttcaatttccggtacccaca
tgaggccactcacagcttcctataactctagctccaggagagccattttg
gcctacctgtgtaacacatacatgaatatacatattataaaaatattaga
acatgtatatcaaataaatacattaaggaaaattgcagtcattgcaaagg
gaagggcttcaaattcttttcctcttaagacactctgaaactattgtttc
atatacaacagtaatgatagttgctccatttctcagagaatgatttcctt
aaaaaatatccattgtttagaattaagtatatgaataataattttatgta
gagcacaaatatttaaatttataaaatttatttcacatgaaattactttc
aggccaccaaaactgaggggaataacaacagacaaactgtactgccaatt
aagagtctgtgactgggaccaaaagaaaaacttaataaagacaattaaaa
gaaaaaaaaatatttttaggttttcccatcttagagatttatgtccagga
tcacctggctttgggtctgtagcaaaacagaacagcaatgtttggcataa
ttgtgctgaagtggaagctactcagtgcacagcactcaacattataattt
ataatattataattaataatat
gaattctcactgaattttcctcctttacagaacattctttttccttatat
ttctgtgagtaaataatggttgaagtgcatgtcagagtattgaaatacag
tcagttttgaattaacatttctctttattcattctatgcctgcaatcata
ctagagaaaaacacgtcaaattttgcataaatatctacctgaacttttca
aattgccacttatgtaattagagggcaaatgaagaccacacctggaagaa
gcactatcaaatttttatgaattttcagagttagataaacatcatgttgc
tggcataaaggaagccttgttgacagaatttttcattaattggttctgaa
agacagctgatagacatttactagaatgatacagaagacagctttgttct
ccacttcagttgatttcttttgtttgatcaacttgtaaattatcaaagat
cttccaagaaattagtgaaagtgtacacagagagatgtcatttgcaatta
ataaataatattgagggaaatgcttaagaaatttttgcttgtacacacca
gtaaaaaacacacatagtaataattacaaagaaacacatatggataaaat
aaagtgaaattatcttatagacagtttgggtagaaaatctatacaactct
ctagaataacagaaaatcagaaggctgcatagactatcttcatagagagt
aggaatcagcatttggctgacatgtcaacactgttgcagacatgaactca
taaccactgtgactacacagatacactgaacagatcaagccatacaatat
ccaaacctggatgatgaagggacacataagcttctactcttaagtgaagg
tactattggcaatttgttgctttttggtatgggagaagtggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96257091_96257957
seq2: B6Ng01-007I24.b_43_913

seq1  GAATTCTCAAAGCTCTTCCTAAGTTCCAAAAGAATCTCAAAGGAGAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAGCTCTTCCTAAGTTCCAAAAGAATCTCAAAGGAGAGAAG  50

seq1  CTGTCACTGTCATTATTCCTCTTCACTAAAGAATCATGTAGGATCATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACTGTCATTATTCCTCTTCACTAAAGAATCATGTAGGATCATAAT  100

seq1  TTACTGTAGGAAATTCACTTGATAAGGTTTGAAATGCCACGATTTTATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTAGGAAATTCACTTGATAAGGTTTGAAATGCCACGATTTTATCA  150

seq1  TTTAAATTTGGAAAGAATCTTGGGGATAGAGTGGTAACTCCAACTGTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTGGAAAGAATCTTGGGGATAGAGTGGTAACTCCAACTGTAAG  200

seq1  AGAACACACTGCTCTTGAAGAGAACCCAAGTTCAATTTCCGGTACCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACACTGCTCTTGAAGAGAACCCAAGTTCAATTTCCGGTACCCACA  250

seq1  TGAGGCCACTCACAGCTTCCTATAACTCTAGCTCCAGGAGAGCCATTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCACTCACAGCTTCCTATAACTCTAGCTCCAGGAGAGCCATTTTG  300

seq1  GCCTACCTGTGTAACACATACATGAATATACATATTATAAAAATATTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCTGTGTAACACATACATGAATATACATATTATAAAAATATTAGA  350

seq1  ACATGTATATCAAATAAATACATTAAGGAAAATTGCAGTCATTGCAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATATCAAATAAATACATTAAGGAAAATTGCAGTCATTGCAAAGG  400

seq1  GAAGGGCTTCAAATTCTTTTCCTCTTAAGACACTCTGAAACTATTGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCTTCAAATTCTTTTCCTCTTAAGACACTCTGAAACTATTGTTTC  450

seq1  ATATACAACAGTAATGATAGTTGCTCCATTTCTCAGAGAATGATTTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAACAGTAATGATAGTTGCTCCATTTCTCAGAGAATGATTTCCTT  500

seq1  AAAAAATATCCATTGTTTAGAATTAAGTATATGAATAATAATTTTATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATCCATTGTTTAGAATTAAGTATATGAATAATAATTTTATGTA  550

seq1  GAGCACAAATATTTAAATTTATAAAATTTATTTCACATGAAATTACTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAAATATTTAAATTTATAAAATTTATTTCACATGAAATTACTTTC  600

seq1  AGGCCACCAAAACTGAGGGGAATAACAACAGACAAACTGTACTGCCAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACCAAAACTGAGGGGAATAACAACAGACAAACTGTACTGCCAATT  650

seq1  AAGAGTCTGTGACTGGGACCAAAAGAAAAACTTAATAAAGACAATTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTGTGACTGGGACCAAAAGAAAAACTTAATAAAGACAATTAAAA  700

seq1  GAAAAAAAAATATTTTTAGG-TTTCCCATCTTAGAGATTTATGTCCAGGA  749
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAAAAAAAAATATTTTTAGGTTTTCCCATCTTAGAGATTTATGTCCAGGA  750

seq1  TCACCTGGCTTTGGGTCTGTAGCAAAACAGAACAGCAATG-TTGGCATAA  798
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCACCTGGCTTTGGGTCTGTAGCAAAACAGAACAGCAATGTTTGGCATAA  800

seq1  TTGTGCTGAAGTGGAAGCTACTCAGTGCACAGCACTCAACATTAATAATT  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTGTGCTGAAGTGGAAGCTACTCAGTGCACAGCACTCAACATT-ATAATT  849

seq1  AATAATA--ATAA-TAATAATA  867
       ||||||  |||| ||||||||
seq2  TATAATATTATAATTAATAATA  871

seq1: chr14_96409397_96410288
seq2: B6Ng01-007I24.g_70_962 (reverse)

seq1  TACCACTTCTTCCCATACCAAAAAGCAACAAATTGCCAATAGTACCTTCA  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTTC-TCCCATACCAAAAAGCAACAAATTGCCAATAGTACCTTCA  49

seq1  C-TAAGAGTAGAAGCTTATGTGTCCCTTCATCATCCAGGTTTGGATATTG  99
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAGTAGAAGCTTATGTGTCCCTTCATCATCCAGGTTTGGATATTG  99

seq1  TATGGCTTGATCTGTTCAGTGTATCTGTGTAGTCACAGTGGTTATGAGTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTGATCTGTTCAGTGTATCTGTGTAGTCACAGTGGTTATGAGTT  149

seq1  CATGTCTGCAACAGTGTTGACATGTCAGCCAAATGCTGATTCCTACTCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGCAACAGTGTTGACATGTCAGCCAAATGCTGATTCCTACTCTC  199

seq1  TATGAAGATAGTCTATGCAGCCTTCTGATTTTCTGTTATTCTAGAGGGTT  249
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TATGAAGATAGTCTATGCAGCCTTCTGATTTTCTGTTATTCTAGAGAGTT  249

seq1  GTATAGATTTTCTACCC-AACTGTCTATAAGATAATTTCACTTTATTTTA  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTATAGATTTTCTACCCAAACTGTCTATAAGATAATTTCACTTTATTTTA  299

seq1  TCCATATGTGTTTCTTTGTAATTATTACTATGTGTGTTTTTTACTGGTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATGTGTTTCTTTGTAATTATTACTATGTGTGTTTTTTACTGGTGT  349

seq1  GTACAAGCAAAAATTTCTTAAGCATTTCCCTCAATATTATTTATTAATTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGCAAAAATTTCTTAAGCATTTCCCTCAATATTATTTATTAATTG  399

seq1  CAAATGACATCTCTCTGTGTACACTTTCACTAATTTCTTGGAAGATCTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGACATCTCTCTGTGTACACTTTCACTAATTTCTTGGAAGATCTTT  449

seq1  GATAATTTACAAGTTGATCAAACAAAAGAAATCAACTGAAGTGGAGAACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTACAAGTTGATCAAACAAAAGAAATCAACTGAAGTGGAGAACA  499

seq1  AAGCTGTCTTCTGTATCATTCTAGTAAATGTCTATCAGCTGTCTTTCAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTCTTCTGTATCATTCTAGTAAATGTCTATCAGCTGTCTTTCAGA  549

seq1  ACCAATTAATGAAAAATTCTGTCAACAAGGCTTCCTTTATGCCAGCAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTAATGAAAAATTCTGTCAACAAGGCTTCCTTTATGCCAGCAACA  599

seq1  TGATGTTTATCTAACTCTGAAAATTCATAAAAATTTGATAGTGCTTCTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTATCTAACTCTGAAAATTCATAAAAATTTGATAGTGCTTCTTC  649

seq1  CAGGTGTGGTCTTCATTTGCCCTCTAATTACATAAGTGGCAATTTGAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGGTCTTCATTTGCCCTCTAATTACATAAGTGGCAATTTGAAAA  699

seq1  GTTCAGGTAGATATTTATGCAAAATTTGACGTGTTTTTCTCTAGTATGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGTAGATATTTATGCAAAATTTGACGTGTTTTTCTCTAGTATGAT  749

seq1  TGCAGGCATAGAATGAATAAAGAGAAATGTTAATTCAAAACTGACTGTAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCATAGAATGAATAAAGAGAAATGTTAATTCAAAACTGACTGTAT  799

seq1  TTCAATACTCTGACATGCACTTCAACCATTATTTACTCACAGAAATATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATACTCTGACATGCACTTCAACCATTATTTACTCACAGAAATATAA  849

seq1  GGAAAAAGAATGTTCTGTAAAGGAGGAAAATTCAGTGAGAATTC  892
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAATGTTCTGTAAAGGAGGAAAATTCAGTGAGAATTC  893