BAC Information

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BAC

Clone NameB6Ng01-008P10
Chromosome14 (Build37)
Map Location 76,736,239 - 76,825,257
singlet/doubletdoublet
Overlap geneTsc22d1
Upstream geneZc3h13, Gm912, Spert, 4930564B18Rik, Cog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik
Downstream gene2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008P10.bB6Ng01-008P10.g
ACCDH845041DH845042
length1,1301,099
definitionDH845041|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P10, 5' end.DH845042|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,824,113 - 76,825,257)(76,736,239 - 76,737,348)
sequence
gaattcctgcatctggaaggctgaggcaggagaactgctgtgaaagactt
gtctctgctaagcaaggagaatgtgacctcacaagcaaggatgagaaaca
agcacacgttctgccatgacatccagccttgatggtaacgatcgaaccca
aggaacaaggctcccactgtgactccagaccggggcttttcagtttcaag
tctcaaatttaaatttctagacaagaaacaatatctattcttttgctgtt
aaagtgaatttttgaggccctatctcaaataaataaaaggaaagatataa
aaatgaagcctatttaaaaaaaaaaaaacaggccatgaaaagacaatagt
aatacaactctggatgctggaaagtggacggctgacttcgcaaacagtaa
taaaaacaatcagattaggtaaacagtggagaaagccaaaaacatcccaa
cttaaacttcacaaagccccaaaggcccaggaactggcagccagagccac
tgtaggcatggaggctctgaggaaggcaggtgtaagcagctctcaggcct
gctccttccccaagggccaagtctgcaggctgagaggggccttgtgaagc
caagacgagtgggcgaagctcagcagaaggcaagcggggagagtggaaca
tggctgaatgaaggcctgctggggacccaaggctcccaagacttttcact
cctctgctccctgcagcccctgtggacacgcctttctgcctaggcactcc
ttcttaccatagctaatcaagtacgaagatatcccgacccctagtcaaac
agcccagtcaggtaccagctattggggccatcattggccgacaaaagctc
tgttgagaacctgtacccacacttccatctcctaccttgcacacaactgc
caactgtttaaaggaagggatagaacatgaaagatacagacccagttaca
gaagaaaatgaaccttgaaaagcagactgaccacaaaggaaacttttaaa
gagctaagcgtgatgaaccacgacacatctacaggagcagcctgataatg
gcaagttcaaggccagcttgatttacacagagaatccctgtcattaacaa
atctaactgttcacggactaagaaagctct
gaattcacttgacttttcccagggtttgcagccctgtgtggttgccaggc
atctgggaaagccatcagatccactggggaagctactttgcaaaagaaaa
tacagtaaaaggtagtgggcgggggcagggtgctgaccagcctgcaccct
tccctttgctggtacagtgatctgatttgagatcaagtaaccttgaatag
tgagatacagtggacagaacagggccatcatgtaaggctggcgggtgtgg
gggacacagcacaatttcagaagttccatggttacaccagcaccccacag
cctcccggcctgccacatcccacagtcctggcacaagcattattctgtga
attctggccatctctgcacccaggctctcttgtatgttcaagttctccag
ggtcaggttcaccttaacctgtgcaagtcctttgggaggtttaccttctt
agagcctggggctgtggtcttttccttgaatggactcggagtgagtgact
acggatattttgcccaggaaacacaaacaaaagccagtggcaaacattct
aaaactctcacaggttgtttccccttaagaataaggctgtctgatggagt
caagctactgcttctcttaggctgggttccttctcagatggctccccggt
tccttgatcgtatcaagctcttatatgtttgtctcagtagttcatgattc
atcccacagttgaaccccaacttggagataagggagaactctgttatgcc
agcaatcttctaagtctacattgataactcaggatcactgactctagctg
acttgagaagggggtcatgatttgacttttttgtgtatgtgatctaattt
ttttttctagattttttccatccatagtgtcttccccatcagctttgccc
atatgacttctgtagctcatcaaaacaggagaacaccaagcatagctgtg
tcctccccgtgagtgtcatggcagagtgcagctttgcaaggcctggagct
taaaatgttgggcacattgtgaataaaagagccagtgtgtcttggtgggt
gcagctacatcacactacttggggataagactagagatagcctatttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_76824113_76825257
seq2: B6Ng01-008P10.b_44_1173 (reverse)

seq1  AGAGCTTTTTCTTAGCTCCGTGAACATGTTAGATTTGTTTTATGACAGGG  50
      |||||  |||||||| |||||||||| |||||||||| || |||||||||
seq2  AGAGC--TTTCTTAG-TCCGTGAACA-GTTAGATTTG-TTAATGACAGGG  45

seq1  TTTCTCTGTGTAGTCCAGGCTGGCCTTGAACTTGCCATTATCCAGCCCTG  100
       |||||||||||   || ||||||||||||||||||||||||  |  |||
seq2  ATTCTCTGTGTAAATCAAGCTGGCCTTGAACTTGCCATTATCAGG--CTG  93

seq1  CCTCTGTGTAGATGTTGTCGTGTGTCATCACGCTTAGCTCTTTAAAAGTT  150
      |  |  |||||||| |||||||  ||||||||||||||||||||||||||
seq2  CTCC--TGTAGATG-TGTCGTGGTTCATCACGCTTAGCTCTTTAAAAGTT  140

seq1  TCCTTTGTGTTCAGTCTGCTTTTTCCAGGTTTCATTTTCTTCTGTACCTG  200
      ||||||||| |||||||||||||  || | |||||||||||||||| |||
seq2  TCCTTTGTGGTCAGTCTGCTTTT--CAAGGTTCATTTTCTTCTGTAACTG  188

seq1  GGTCTGTATCTTTCATGTTCTATTCCCTTCCTTTAAACAGTTGGCAGTTG  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGTCTGTATCTTTCATGTTCTA-TCCCTTCCTTTAAACAGTTGGCAGTTG  237

seq1  TGTGCAAGGTAGGAGATGGAAGTGTTGGGTACAGGTTCTCAACAGAGCTT  300
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTGCAAGGTAGGAGATGGAAGTG-TGGGTACAGGTTCTCAACAGAGCTT  286

seq1  TTGTCGGCCATTGATGGCCCCAATAGCTGGTACCCTGACTGGGCTGTTTG  350
      |||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  TTGTCGGCCAATGATGGCCCCAATAGCTGGTA-CCTGACTGGGCTGTTTG  335

seq1  ACTAGGGGTCGGGATATCTTCGTACTTGATTAGCTATGGTAAGAAGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGGTCGGGATATCTTCGTACTTGATTAGCTATGGTAAGAAGGAGT  385

seq1  GCCTAGGCAGAAAGGCGTGTCCACAGGGGCTGCAGGGAGCAGAGGAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGCAGAAAGGCGTGTCCACAGGGGCTGCAGGGAGCAGAGGAGTGA  435

seq1  AAAGTCTTGGGAGCCTTGGGTCCCCAGCAGGCCTTCATTCAGCCATGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTGGGAGCCTTGGGTCCCCAGCAGGCCTTCATTCAGCCATGTTC  485

seq1  CACTCTCCCCGCTTGCCTTCTGCTGAGCTTCGCCCACTCGTCTTGGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCCCCGCTTGCCTTCTGCTGAGCTTCGCCCACTCGTCTTGGCTTC  535

seq1  ACAAGGCCCCTCTCAGCCTGCAGACTTGGCCCTTGGGGAAGGAGCAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCCCTCTCAGCCTGCAGACTTGGCCCTTGGGGAAGGAGCAGGCC  585

seq1  TGAGAGCTGCTTACACCTGCCTTCCTCAGAGCCTCCATGCCTACAGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCTGCTTACACCTGCCTTCCTCAGAGCCTCCATGCCTACAGTGGC  635

seq1  TCTGGCTGCCAGTTCCTGGGCCTTTGGGGCTTTGTGAAGTTTAAGTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGCCAGTTCCTGGGCCTTTGGGGCTTTGTGAAGTTTAAGTTGGG  685

seq1  ATGTTTTTGGCTTTCTCCACTGTTTACCTAATCTGATTGTTTTTATTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTGGCTTTCTCCACTGTTTACCTAATCTGATTGTTTTTATTACT  735

seq1  GTTTGCGAAGTCAGCCGTCCACTTTCCAGCATCCAGAGTTGTATTACTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCGAAGTCAGCCGTCCACTTTCCAGCATCCAGAGTTGTATTACTAT  785

seq1  TGTCTTTTCATGGCCTGTTTTTTTTTTTTTAAATAGGCTTCATTTTTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTCATGGCCTGTTTTTTTTTTTTTAAATAGGCTTCATTTTTATA  835

seq1  TCTTTCCTTTTATTTATTTGAGATAGGGCCTCAAAAATTCACTTTAACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTTTATTTATTTGAGATAGGGCCTCAAAAATTCACTTTAACAG  885

seq1  CAAAAGAATAGATATTGTTTCTTGTCTAGAAATTTAAATTTGAGACTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAATAGATATTGTTTCTTGTCTAGAAATTTAAATTTGAGACTTGA  935

seq1  AACTGAAAAGCCCCGGTCTGGAGTCACAGTGGGAGCCTTGTTCCTTGGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAAGCCCCGGTCTGGAGTCACAGTGGGAGCCTTGTTCCTTGGGT  985

seq1  TCGATCGTTACCATCAAGGCTGGATGTCATGGCAGAACGTGTGCTTGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATCGTTACCATCAAGGCTGGATGTCATGGCAGAACGTGTGCTTGTTT  1035

seq1  CTCATCCTTGCTTGTGAGGTCACATTCTCCTTGCTTAGCAGAGACAAGTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCTTGCTTGTGAGGTCACATTCTCCTTGCTTAGCAGAGACAAGTC  1085

seq1  TTTCACAGCAGTTCTCCTGCCTCAGCCTTCCAGATGCAGGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGCAGTTCTCCTGCCTCAGCCTTCCAGATGCAGGAATTC  1130

seq1: chr14_76736239_76737348
seq2: B6Ng01-008P10.g_70_1168

seq1  GAATTCACTTGACTTTTCCCAGGGTTTGCAGCCCTGTGTGGTTGCCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGACTTTTCCCAGGGTTTGCAGCCCTGTGTGGTTGCCAGGC  50

seq1  ATCTGGGAAAGCCATCAGATCCACTGGGGAAGCTACTTTGCAAAAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGAAAGCCATCAGATCCACTGGGGAAGCTACTTTGCAAAAGAAAA  100

seq1  TACAGTAAAAGGTAGTGGGCGGGGGCAGGGTGCTGACCAGCCTGCACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAAAAGGTAGTGGGCGGGGGCAGGGTGCTGACCAGCCTGCACCCT  150

seq1  TCCCTTTGCTGGTACAGTGATCTGATTTGAGATCAAGTAACCTTGAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGCTGGTACAGTGATCTGATTTGAGATCAAGTAACCTTGAATAG  200

seq1  TGAGATACAGTGGACAGAACAGGGCCATCATGTAAGGCTGGCGGGTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATACAGTGGACAGAACAGGGCCATCATGTAAGGCTGGCGGGTGTGG  250

seq1  GGGACACAGCACAATTTCAGAAGTTCCATGGTTACACCAGCACCCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACAGCACAATTTCAGAAGTTCCATGGTTACACCAGCACCCCACAG  300

seq1  CCTCCCGGCCTGCCACATCCCACAGTCCTGGCACAAGCATTATTCTGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCGGCCTGCCACATCCCACAGTCCTGGCACAAGCATTATTCTGTGA  350

seq1  ATTCTGGCCATCTCTGCACCCAGGCTCTCTTGTATGTTCAAGTTCTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCCATCTCTGCACCCAGGCTCTCTTGTATGTTCAAGTTCTCCAG  400

seq1  GGTCAGGTTCACCTTAACCTGTGCAAGTCCTTTGGGAGGTTTACCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGTTCACCTTAACCTGTGCAAGTCCTTTGGGAGGTTTACCTTCTT  450

seq1  AGAGCCTGGGGCTGTGGTCTTTTCCTTGAATGGACTCGGAGTGAGTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGGGGCTGTGGTCTTTTCCTTGAATGGACTCGGAGTGAGTGACT  500

seq1  ACGGATATTTTGCCCAGGAAACACAAACAAAAGCCAGTGGCAAACATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGATATTTTGCCCAGGAAACACAAACAAAAGCCAGTGGCAAACATTCT  550

seq1  AAAACTCTCACAGGTTGTTTCCCCTTAAGAATAAGGCTGTCTGATGGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTCACAGGTTGTTTCCCCTTAAGAATAAGGCTGTCTGATGGAGT  600

seq1  CAAGCTACTGCTTCTCTTAGGCTGGGTTCCTTCTCAGATGGCTCCCCGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTACTGCTTCTCTTAGGCTGGGTTCCTTCTCAGATGGCTCCCCGGT  650

seq1  TCCTTGATCGTATCAAGCTCTTATATGTTTGTCTCAGTAGTTCATGATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGATCGTATCAAGCTCTTATATGTTTGTCTCAGTAGTTCATGATTC  700

seq1  ATCCCACAGTTGAACCCCAACTTGGAGATAAGGGAGAACTCTGTTATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACAGTTGAACCCCAACTTGGAGATAAGGGAGAACTCTGTTATGCC  750

seq1  AGCAATCTTCTAAGTCTACATTGATAACTCAGGATCACTGACTCTAGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCTTCTAAGTCTACATTGATAACTCAGGATCACTGACTCTAGCTG  800

seq1  ACTTGAGAAGGGGGTCATGATTTGACTTTTTTGTGTATGTGATCTAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGAAGGGGGTCATGATTTGACTTTTTTGTGTATGTGATCTAATTT  850

seq1  TTTTTTCTAGATTTTTTCCATCCATAGTGTCTTCCCCATCAGCTTTGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTAGATTTTTTCCATCCATAGTGTCTTCCCCATCAGCTTTGCCC  900

seq1  ATATGACTTCTGTAAGCTCATCAAAACAGGAGAACACCAAGCATAGGCTG  950
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  ATATGACTTCTGT-AGCTCATCAAAACAGGAGAACACCAAGCATA-GCTG  948

seq1  TGTCCTCCCCGTGAGTGTCATGGCAGAGTGCAAGCTTTGCAAGGCCTGGA  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTCCTCCCCGTGAGTGTCATGGCAGAGTGC-AGCTTTGCAAGGCCTGGA  997

seq1  GCTTAAAATGTTGGGCACAATTGTGAATAAAAAGAAGCCAGTGTGTC-TG  1049
      |||||||||||||||||| |||||||||||||   |||||||||||| ||
seq2  GCTTAAAATGTTGGGCAC-ATTGTGAATAAAA--GAGCCAGTGTGTCTTG  1044

seq1  GT-GGTGCAAGCCTACAATCACAACTACTTGGGCGATAAGACAAGAGGAT  1098
      || ||||||   |||| ||||| |||||||||| |||||||| ||| |||
seq2  GTGGGTGCA--GCTAC-ATCAC-ACTACTTGGG-GATAAGACTAGA-GAT  1088

seq1  AGCCATATTTGG  1110
      |||| |||||||
seq2  AGCC-TATTTGG  1099