BAC Information

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BAC

Clone NameB6Ng01-009P07
Chromosome14 (Build37)
Map Location 37,523,036 - 37,702,627
singlet/doubletdoublet
Overlap geneGcap14
Upstream gene4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
Downstream geneLOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm, LOC382871, LOC382872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009P07.bB6Ng01-009P07.g
ACCDH845761DH845762
length1,139760
definitionDH845761|Mus musculus domesticus DNA, BAC clone: B6Ng01-009P07, 5' end.DH845762|Mus musculus domesticus DNA, BAC clone: B6Ng01-009P07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,523,036 - 37,523,946)(37,701,867 - 37,702,627)
sequence
gaattctcttacctatgcaaggagttagatttagcctgaatgacataaga
ccaatcagagagaggacaatgccatcacctgaatcaccagcaagtcggac
atctgttgaggtcttactgcatgaaagagcaatagtcttgaaaaagctca
agaaatacaacaacatgtaaccatacaaatgatcacacagttgtcacaga
ctggaagaagtggagtgcccattttggtagccgaggctcagaaggcacgc
ataaagttaacctgctaccactggctgcctctgcctgctggatgccagaa
atggttaaaataggaaagaaatatccagatccacagagtccagatgctgg
aggatagtgtgtgctgcttgtaatccagaaacctaaatccatcacgtctc
taacatgagtgaggaatgccctacatcagcttgttctcgctgttctgttc
tagttggccaatcccccaaagcaaacaccatgccgcatcactatcccaga
acaacaggtccaagatactccttaaggtgaaaagttgaagtcttaggaca
tcttactgatcccacatatttgtgggaagattgttaagtacccacaaagg
ggaaatatagacactgaacctacatgtaacccagtggtgcagcgtgtata
tgaccaagatacctctgctagctctggtacagctagtcccaaaccctggg
tagaaatttagaaaatatcaatgtattaatttacagattcaggatttcct
acaaaacctttgctagtcacaaccattagaaagggacacatacaattttt
gaaggaaggaattgtaaaactcagggcactctgaggcacttaaccagaac
agatccccataccctggaaaagcatgatgaaggatcctacaccctgtgtg
agggacgttaatataaataaagcccaagcccacatcatcttaaagaaagg
atggtaggaggaaagacgttactgtttcaagccactgagattccgcattc
ttgtgacacagtaaccgtcctgattgatggagttacagccatgtgtcagt
gttgacaatgaaagtttgtgggagggataagtgtcacctccaatagtcct
tctgaccctggtcccttttaaggattgttcgattactag
gaattccagattaaaataaggattagttatatgatttggctctggtaacc
tctcaggaatgagtgggatatgtctttctgtagagattttttacaggatg
cttgcagccatagctgtagggtcattacatgcccttcagtgtctctcact
gagtttgagaggttcttttggaagagaaataggttttaactgctatactg
agactcactcctggggataggtgttaccatatgctagcaaagctattttt
ctacttcctttaggttgtgtgtgagagagagatgaaggccatgaagtcat
agcaatgaacccaatgtttttttcagagacagttaagaacaggtcttagt
ttttttcctatactaaatgaacattcaacatgataataccggtttctgca
tttacgtagttttccgttcccagcactcagcttttacagaggttgattat
acataataggcaggagttaaggagtatctctctcattgtaatgtttcatt
ttaaagcttctttctgatacctgcttgagcactgactagagtgtactatg
tttatcatcaagtacagaggccaagagtgtggctgagtcttcagaagcag
cagttgggtttttattttgagttgtaagagtgagtggtagatgttagaag
tggtagatacagtatggaaggtagcctgcagaaagcccacagtggtatgg
tcttgtatggaatgtagcctttaaaaagccacagagcgtgtgagcatcat
ttataggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_37523036_37523946
seq2: B6Ng01-009P07.b_273_1187

seq1  TGGTAGCCGAGGCTCAGAAGGCACGCATAAAGTTAACCTGCTACCACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCCGAGGCTCAGAAGGCACGCATAAAGTTAACCTGCTACCACTGG  50

seq1  CTGCCTCTGCCTGCTGGATGCCAGAAATGGTTAAAATAGGAAAGAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGCCTGCTGGATGCCAGAAATGGTTAAAATAGGAAAGAAATAT  100

seq1  CCAGATCCACAGAGTCCAGATGCTGGAGGATAGTGTGTGCTGCTTGTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCCACAGAGTCCAGATGCTGGAGGATAGTGTGTGCTGCTTGTAAT  150

seq1  CCAGAAACCTAAATCCATCACGTCTCTAACATGAGTGAGGAATGCCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACCTAAATCCATCACGTCTCTAACATGAGTGAGGAATGCCCTAC  200

seq1  ATCAGCTTGTTCTCGCTGTTCTGTTCTAGTTGGCCAATCCCCCAAAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTTGTTCTCGCTGTTCTGTTCTAGTTGGCCAATCCCCCAAAGCAA  250

seq1  ACACCATGCCGCATCACTATCCCAGAACAACAGGTCCAAGATACTCCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATGCCGCATCACTATCCCAGAACAACAGGTCCAAGATACTCCTTA  300

seq1  AGGTGAAAAGTTGAAGTCTTAGGACATCTTACTGATCCCACATATTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAAAGTTGAAGTCTTAGGACATCTTACTGATCCCACATATTTGTG  350

seq1  GGAAGATTGTTAAGTACCCACAAAGGGGAAATATAGACACTGAACCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTGTTAAGTACCCACAAAGGGGAAATATAGACACTGAACCTACA  400

seq1  TGTAACCCAGTGGTGCAGCGTGTATATGACCAAGATACCTCTGCTAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCCAGTGGTGCAGCGTGTATATGACCAAGATACCTCTGCTAGCTC  450

seq1  TGGTACAGCTAGTCCCAAACCCTGGGTAGAAATTTAGAAAATATCAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAGCTAGTCCCAAACCCTGGGTAGAAATTTAGAAAATATCAATGT  500

seq1  ATTAATTTACAGATTCAGGATTTCCTACAAAACC-TTGCTAGTCACAACC  549
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTAATTTACAGATTCAGGATTTCCTACAAAACCTTTGCTAGTCACAACC  550

seq1  ATTAGAAAGGGACACATACAA-TTTTGAAGGAAGGAATTGTAAAACTCAG  598
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTAGAAAGGGACACATACAATTTTTGAAGGAAGGAATTGTAAAACTCAG  600

seq1  GGCACTCTGAGGCACTTAACCAGAACAGATCCCCATACCCTGGAAAAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCTGAGGCACTTAACCAGAACAGATCCCCATACCCTGGAAAAGCA  650

seq1  TGATGAAGGATCCTACACCCTGTGTGAGGGACGTTAATATAAATAAAGCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAGGATCCTACACCCTGTGTGAGGGACGTTAATATAAATAAAGCC  700

seq1  CAAGCCCACATCAACTTAAAGAAAGGATGGTAGGAGGAAAGACGTTACTG  748
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCACATCATCTTAAAGAAAGGATGGTAGGAGGAAAGACGTTACTG  750

seq1  TTTCAAGCCACTGAGATTCCGCATTCTTGTGACCACAGTAACCGTCCTGA  798
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTCAAGCCACTGAGATTCCGCATTCTTGTGA-CACAGTAACCGTCCTGA  799

seq1  TTGATGGAGTTACAGCCATGTGTCAGTGTTGACAATGAAGGTTTGT-GGA  847
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  TTGATGGAGTTACAGCCATGTGTCAGTGTTGACAATGAAAGTTTGTGGGA  849

seq1  GGGATAAGTGTCACCTCCAATAGTCCTTCTGACCCT-GTCCCTTTTAAGT  896
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  GGGATAAGTGTCACCTCCAATAGTCCTTCTGACCCTGGTCCCTTTTAAGG  899

seq1  A-TGTTCGATTACTAG  911
      | ||||||||||||||
seq2  ATTGTTCGATTACTAG  915

seq1: chr14_37701867_37702627
seq2: B6Ng01-009P07.g_68_827 (reverse)

seq1  ACTCCTAATAACTGATGCTCTCACGCTCTGTGTGCTTTCTATAGGCTACC  50
      |||||| |||| |||||||| ||||||||||| ||||| || ||||||| 
seq2  ACTCCT-ATAAATGATGCTCACACGCTCTGTG-GCTTTTTAAAGGCTACA  48

seq1  TTCCATACAGTACC-TACCACTGTGGGCTTACTGCAGGCTACCTTCCATA  99
      |||||||||  ||| ||||||||||||||| |||||||||||||||||||
seq2  TTCCATACAAGACCATACCACTGTGGGCTTTCTGCAGGCTACCTTCCATA  98

seq1  CTGTATCTACCACTTCTAACATCTACCACTCACTCTTACAACTCAAAATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCTACCACTTCTAACATCTACCACTCACTCTTACAACTCAAAATA  148

seq1  AAAACCCAACTGCTGCTTCTGAAGACTCAGCCACACTCTTGGCCTCTGTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAACTGCTGCTTCTGAAGACTCAGCCACACTCTTGGCCTCTGTA  198

seq1  CTTGATGATAAACATAGTACACTCTAGTCAGTGCTCAAGCAGGTATCAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGATAAACATAGTACACTCTAGTCAGTGCTCAAGCAGGTATCAGA  248

seq1  AAGAAGCTTTAAAATGAAACATTACAATGAGAGAGATACTCCTTAACTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTTTAAAATGAAACATTACAATGAGAGAGATACTCCTTAACTCC  298

seq1  TGCCTATTATGTATAATCAACCTCTGTAAAAGCTGAGTGCTGGGAACGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATTATGTATAATCAACCTCTGTAAAAGCTGAGTGCTGGGAACGGA  348

seq1  AAACTACGTAAATGCAGAAACCGGTATTATCATGTTGAATGTTCATTTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACGTAAATGCAGAAACCGGTATTATCATGTTGAATGTTCATTTAG  398

seq1  TATAGGAAAAAAACTAAGACCTGTTCTTAACTGTCTCTGAAAAAAACATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAAAAAAACTAAGACCTGTTCTTAACTGTCTCTGAAAAAAACATT  448

seq1  GGGTTCATTGCTATGACTTCATGGCCTTCATCTCTCTCTCACACACAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCATTGCTATGACTTCATGGCCTTCATCTCTCTCTCACACACAACC  498

seq1  TAAAGGAAGTAGAAAAATAGCTTTGCTAGCATATGGTAACACCTATCCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAAGTAGAAAAATAGCTTTGCTAGCATATGGTAACACCTATCCCC  548

seq1  AGGAGTGAGTCTCAGTATAGCAGTTAAAACCTATTTCTCTTCCAAAAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGAGTCTCAGTATAGCAGTTAAAACCTATTTCTCTTCCAAAAGAA  598

seq1  CCTCTCAAACTCAGTGAGAGACACTGAAGGGCATGTAATGACCCTACAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAAACTCAGTGAGAGACACTGAAGGGCATGTAATGACCCTACAGC  648

seq1  TATGGCTGCAAGCATCCTGTAAAAAATCTCTACAGAAAGACATATCCCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTGCAAGCATCCTGTAAAAAATCTCTACAGAAAGACATATCCCAC  698

seq1  TCATTCCTGAGAGGTTACCAGAGCCAAATCATATAACTAATCCTTATTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGAGAGGTTACCAGAGCCAAATCATATAACTAATCCTTATTTT  748

seq1  AATCTGGAATTC  761
      ||||||||||||
seq2  AATCTGGAATTC  760