BAC Information

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BAC

Clone NameB6Ng01-010C03
Chromosome10 (Build37)14 (Build37)
Map Location 104,053,500 - 104,054,363110,693,893 - 110,694,342
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010C03.bB6Ng01-010C03.g
ACCDH845891DH845892
length701444
definitionDH845891|Mus musculus domesticus DNA, BAC clone: B6Ng01-010C03, 5' end.DH845892|Mus musculus domesticus DNA, BAC clone: B6Ng01-010C03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,500 - 104,054,363)(110,693,893 - 110,694,342)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacgaccctgagat
tccacctcacaccagtcagaaaggctaagatcaaaaattcaggtgacagc
agatgttggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
c
tcagatcttgacacatccacagcttcctgcagaagcagcctgcctactga
gcttcttttgcaacagaatccacctgaaacaaagcaacagaatccagctg
gaacaaaggatgggcctttgggtttccccactacatattcagagttaaaa
aattaaacattgagccttgatcagaaagcttcttcttggctctgttcctg
ttcctccttcccatcctgcccccagctttcctttcaggcacccagtttga
ccaaatctgctggacagctacattttatgaagatgacctgcctcaactct
gaattgaaccatttagatgtgcctatgttttgcttgtatttaactccttc
atccaaattattttattttgaatattggtcacctgtgtattttgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtatgtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053500_104054363
seq2: B6Ng01-010C03.b_46_696 (reverse)

seq1  TCTTGAGTTTAATGTGTTTAGCAAATTGTATCTTATATCTTGGGTATCCT  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGTTTCATGTGTTTAGCAAATTGTATCTTATATCTTGGGTATCCT  50

seq1  AAGTTTCTGGGCTAATATCCACTTATCAGTGAGTACATATTGCGCGAGTT  100
      | ||||  |||||||||||||||||||||||||||||||||| | |||||
seq2  AGGTTT-GGGGCTAATATCCACTTATCAGTGAGTACATATTGTGTGAGTT  99

seq1  CCTTTGTGATTGGGTTACCGCACTCAGGATGATACTCTCCAGGTCCATCC  150
      ||||||||| || |||||| ||||||||||||| | ||||||||||||||
seq2  CCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCC  149

seq1  ATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACA  200
      ||||||||||||||||||||||||||||||||||||||||          
seq2  ATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGC----------  189

seq1  TTTAATTTAATTAATGTAATTACAATTAATTAATTTATTAATTAAATAAT  250
                                                        
seq2  --------------------------------------------------  189

seq1  TTAATAATTTAATTGATAAATTAATTTAATTAATTAATTTAATTAATTAA  300
                                                        
seq2  --------------------------------------------------  189

seq1  ATTAAATAATAATTTAATAATAAATTAAATATTTTAAAATTAATAATAAT  350
                                                        
seq2  --------------------------------------------------  189

seq1  TTTATAAGTAAATAATTTAATTAATGTAATTTAATTAATGTAATTACATT  400
          | ||||                             |||        
seq2  ----TGAGTA-----------------------------GTA--------  198

seq1  ACATTTAATAGCTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTC  450
                 |||||||||||| ||||||||||||||||||||| ||||
seq2  -----------CTCCATTGTGTAGATGTACCACATTTTCTGTATCCATTC  237

seq1  CTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATA  500
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATA  287

seq1  AGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCA  550
      ||||||||||||| |||||||||||||||||||||||||| |||||||||
seq2  AGGCTGCTATGAAGATAGTGGAGCATGTGTCCTTCTTACCAGTTGGGGCA  337

seq1  TCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTAC  600
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTAC  387

seq1  TATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTA  650
      ||||||||||||||||| |||| ||||||| |||||||||||||||||||
seq2  TATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGGTTGTA  437

seq1  CAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACAT  487

seq1  CCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGAC  750
      || ||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  CCACGCCAACATCTGCTGTCACCTGAATTTTTGATCTTAGCCTTTCTGAC  537

seq1  TGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGA  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGGTGTGAGGTGGAATCTCAGGGTCGTTTTGATTTGCATTTCCCTGATGA  587

seq1  TTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCC  637

seq1  TCAGGTGAGAATTC  864
      ||||||||||||||
seq2  TCAGGTGAGAATTC  651

seq1: chr14_110693893_110694342
seq2: B6Ng01-010C03.g_68_517

seq1  GAATTCTCAGATCTTGACACATCCACAGCTTCCTGCAGAAGCAGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGATCTTGACACATCCACAGCTTCCTGCAGAAGCAGCCTGCC  50

seq1  TACTGAGCTTCTTTTGCAACAGAATCCACCTGAAACAAAGCAACAGAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGCTTCTTTTGCAACAGAATCCACCTGAAACAAAGCAACAGAATC  100

seq1  CAGCTGGAACAAAGGATGGGCCTTTGGGTTTCCCCACTACATATTCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGAACAAAGGATGGGCCTTTGGGTTTCCCCACTACATATTCAGAG  150

seq1  TTAAAAAATTAAACATTGAGCCTTGATCAGAAAGCTTCTTCTTGGCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATTAAACATTGAGCCTTGATCAGAAAGCTTCTTCTTGGCTCTG  200

seq1  TTCCTGTTCCTCCTTCCCATCCTGCCCCCAGCTTTCCTTTCAGGCACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTCCTCCTTCCCATCCTGCCCCCAGCTTTCCTTTCAGGCACCCA  250

seq1  GTTTGACCAAATCTGCTGGACAGCTACATTTTATGAAGATGACCTGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACCAAATCTGCTGGACAGCTACATTTTATGAAGATGACCTGCCTC  300

seq1  AACTCTGAATTGAACCATTTAGATGTGCCTATGTTTTGCTTGTATTTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGAATTGAACCATTTAGATGTGCCTATGTTTTGCTTGTATTTAAC  350

seq1  TCCTTCATCCAAATTATTTTATTTTGAATATTGGTCACCTGTGTATTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATCCAAATTATTTTATTTTGAATATTGGTCACCTGTGTATTTTG  400

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTATGTGCA  450
      |||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTATGTGCA  450