BAC Information

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BAC

Clone NameB6Ng01-010J20
Chromosome14 (Build37)
Map Location 82,852,298 - 83,014,375
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010J20.bB6Ng01-010J20.g
ACCDH846233DH846234
length1,095657
definitionDH846233|Mus musculus domesticus DNA, BAC clone: B6Ng01-010J20, 5' end.DH846234|Mus musculus domesticus DNA, BAC clone: B6Ng01-010J20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,013,260 - 83,014,375)(82,852,298 - 82,852,951)
sequence
gaattctagtgaatactgtttcttctgctatatccaatactatttcatgt
gcttttccagctctgttcttaaaagacaatttaaagcattaaagccagga
aattaaaattctaaggctcaaattgaaaatctaaagaacagaataaaaca
gattaggagaaaatgagaatttttttaacaagttggatattaattatgag
aagattatcaaaaatacagatgtataaatatagaaagttagaaaataggt
ttagaaacaataattctacaaaacatggaagaaaatggtggatattatat
tttattttaaaaacaataagctaatataatatcatgtttgtgtcattata
ttagatgaattgtgctacaaccaacttattttaattctattaagagtcaa
cttttaatttaatgttatattctgttagcaatacaaagagaaaagtattg
tgacaaattctagtgcaatatttgaaatctcttccctcaatcagatcatc
ctgccaaaaaaacacttagtctaaatcaataagtatataactccaggaga
agataggtcagaatgaattgaaacagacttatagtacaaagaacaaaaac
aaatcttccataattctgaaagctttctgttttatttcaatcattgtata
cacctgaatataactcatttaaaaaggcgtcatttgtaaattataggtct
cttacccatgggggtttgtttttaaaaaaacaaaaagttcctactttatt
tctttctccttttaaaagttccttaagaaatgtgttggctagtcatttgt
gtcttctttctttctttttctaaaatcagcgaacaatcaagtgatacgat
tcctgagttataagaagataaatgggaaagtgctcttttctatcacttta
taaactgtttaaaacattacagatacatatatgtgcatcttgccaatgat
acatagacagcatagagtcaagtgctctctgattgatttaggaccataga
atgtactatccacagtcaggaacaggagcaagaagggaggtagcaggcta
ggagatgcttttcatggaatattgcgtcccaattttgagatctga
gaattcttctgtcatctaaattgtgattccaaaatttagaattacattca
atcaaggtagactttgattgtttttgtttttttttttttttttttttttt
ttggtttggtttagtttggattttagctaggggatgaatttatttattta
tttactttggtttgtttgtttactggtttttgtttttgttttcttgtttg
ttcatttttgttcgttgtttgtgtatgtaaacacgaaatccatttacttg
gggttctgagattatccctgtccactcaactcaggggaagagacaccaca
gccctgcacacttaaatactgttcagttccaaagctccttgagaagttac
aaatatttgatatggcatttctccttcagtaggcaaaaggggttttactt
cagaaagagataaagaaaaataaggaagagatgctccgcatacagcatgt
gctcttattgtattgtgttatattatttattgccagtctcttcctgattc
atgtgctttgggaatttaatatgcattgagtttttcatgtcagagtcctc
aagaatgatatatcaatattttattttttttaaaaagagcaataaatgaa
gttgcttccaaataaaaggattgtggttcttttcaatttatgacagtatt
tccctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83013260_83014375
seq2: B6Ng01-010J20.b_50_1144 (reverse)

seq1  TCAGATCTCAAAATTGTGACGCAAGTATTCCACTGACAAAAGCATCTTCC  50
      |||||||||||||||| ||||||| ||||||| ||  ||||||||| |||
seq2  TCAGATCTCAAAATTGGGACGCAA-TATTCCA-TG--AAAAGCATC-TCC  45

seq1  TAGCCCTGCTACCTCCCTTCTTGCTCCTGATTTCCTAGAACTGTGGATAG  100
      ||| |||||||||||||||||||||||||  |||||   |||||||||||
seq2  TAG-CCTGCTACCTCCCTTCTTGCTCCTG--TTCCT--GACTGTGGATAG  90

seq1  TACATTTCTATGGGTCCTATATCAATCAGAAGAGCACCTTGACTCTATGG  150
      |||| |||||| ||||||| ||||||||| |||||| ||||||||||| |
seq2  TACA-TTCTAT-GGTCCTAAATCAATCAG-AGAGCA-CTTGACTCTAT-G  135

seq1  CTGTCTATGTATCATTGGCAAGATGCACATATATGTATCTTGTAATGTTT  200
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  CTGTCTATGTATCATTGGCAAGATGCACATATATGTATC-TGTAATG-TT  183

seq1  TTAAACAGTTTTATAAAGTGATAGAAAAGAGCACTTTCCCATTTATTCTT  250
      |||||||| |||||||||||||||||||||||||||||||||||||   |
seq2  TTAAACAG-TTTATAAAGTGATAGAAAAGAGCACTTTCCCATTTAT--CT  230

seq1  TCTTATAACTCAGGAATCGTATCACTTGATTGTTCGCTGATTTTTAGAAA  300
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTTATAACTCAGGAATCGTATCACTTGATTGTTCGCTGA-TTTTAGAAA  279

seq1  AAGAAAGAAAGAAGACACAAATGACTAGCCAACACATTTCTTAAGGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAGACACAAATGACTAGCCAACACATTTCTTAAGGAACT  329

seq1  TTTAAAAGGAGAAAGAAATAAAGTAGGAACTTTTTGTTTTTTTAAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGGAGAAAGAAATAAAGTAGGAACTTTTTGTTTTTTTAAAAACA  379

seq1  AACCCCCATGGGTAAGAGACCTATAATTTACAAATGACGCCTTTTTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCATGGGTAAGAGACCTATAATTTACAAATGACGCCTTTTTAAAT  429

seq1  GAGTTATATTCAGGTGTATACAATGATTGAAATAAAACAGAAAGCTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATATTCAGGTGTATACAATGATTGAAATAAAACAGAAAGCTTTCA  479

seq1  GAATTATGGAAGATTTGTTTTTGTTCTTTGTACTATAAGTCTGTTTCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGGAAGATTTGTTTTTGTTCTTTGTACTATAAGTCTGTTTCAAT  529

seq1  TCATTCTGACCTATCTTCTCCTGGAGTTATATACTTATTGATTTAGACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGACCTATCTTCTCCTGGAGTTATATACTTATTGATTTAGACTA  579

seq1  AGTGTTTTTTTGGCAGGATGATCTGATTGAGGGAAGAGATTTCAAATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTTTTGGCAGGATGATCTGATTGAGGGAAGAGATTTCAAATATT  629

seq1  GCACTAGAATTTGTCACAATACTTTTCTCTTTGTATTGCTAACAGAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGAATTTGTCACAATACTTTTCTCTTTGTATTGCTAACAGAATAT  679

seq1  AACATTAAATTAAAAGTTGACTCTTAATAGAATTAAAATAAGTTGGTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAAATTAAAAGTTGACTCTTAATAGAATTAAAATAAGTTGGTTGT  729

seq1  AGCACAATTCATCTAATATAATGACACAAACATGATATTATATTAGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATTCATCTAATATAATGACACAAACATGATATTATATTAGCTTA  779

seq1  TTGTTTTTAAAATAAAATATAATATCCACCATTTTCTTCCATGTTTTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTAAAATAAAATATAATATCCACCATTTTCTTCCATGTTTTGTA  829

seq1  GAATTATTGTTTCTAAACCTATTTTCTAACTTTCTATATTTATACATCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTGTTTCTAAACCTATTTTCTAACTTTCTATATTTATACATCTG  879

seq1  TATTTTTGATAATCTTCTCATAATTAATATCCAACTTGTTAAAAAAATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGATAATCTTCTCATAATTAATATCCAACTTGTTAAAAAAATTC  929

seq1  TCATTTTCTCCTAATCTGTTTTATTCTGTTCTTTAGATTTTCAATTTGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCTCCTAATCTGTTTTATTCTGTTCTTTAGATTTTCAATTTGAG  979

seq1  CCTTAGAATTTTAATTTCCTGGCTTTAATGCTTTAAATTGTCTTTTAAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAATTTTAATTTCCTGGCTTTAATGCTTTAAATTGTCTTTTAAGA  1029

seq1  ACAGAGCTGGAAAAGCACATGAAATAGTATTGGATATAGCAGAAGAAACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCTGGAAAAGCACATGAAATAGTATTGGATATAGCAGAAGAAACA  1079

seq1  GTATTCACTAGAATTC  1116
      ||||||||||||||||
seq2  GTATTCACTAGAATTC  1095

seq1: chr14_82852298_82852951
seq2: B6Ng01-010J20.g_66_722

seq1  GAATTCTTCTGTCATCTAAATTGTGATTCCAAAATTTAGAATTACATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTCATCTAAATTGTGATTCCAAAATTTAGAATTACATTCA  50

seq1  ATCAAGGTAGACTTTGATTGTTTTTGTTTTTTTTTTTTTTTTTTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGTAGACTTTGATTGTTTTTGTTTTTTTTTTTTTTTTTTTTTTTT  100

seq1  TTGGTTTGGTTTAGTTTGGATTTTAGCTAGGGGATGAATTTATTTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGGTTTAGTTTGGATTTTAGCTAGGGGATGAATTTATTTATTTA  150

seq1  TTTACTTTGGTTTGTTTGTTTACTGGTTTTTGTTTTTGTTTTCTTGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTGGTTTGTTTGTTTACTGGTTTTTGTTTTTGTTTTCTTGTTTG  200

seq1  TTCATTTTTGTTCGTTGTTTGTGTATGTAAACACGAAATCCATTTACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTTGTTCGTTGTTTGTGTATGTAAACACGAAATCCATTTACTTG  250

seq1  GGGTTCTGAGATTATCCCTGTCCACTCAACTCAGGGGAAGAGACACCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTGAGATTATCCCTGTCCACTCAACTCAGGGGAAGAGACACCACA  300

seq1  GCCCTGCACACTTAAATACTGTTCAGTTCCAAAGCTCCTTGAGAAGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGCACACTTAAATACTGTTCAGTTCCAAAGCTCCTTGAGAAGTTAC  350

seq1  AAATATTTGATATGGCATTTCTCCTTCAGTAGGCAAAAGGGGTTTTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTGATATGGCATTTCTCCTTCAGTAGGCAAAAGGGGTTTTACTT  400

seq1  CAGAAAGAGATAAAGAAAAATAAGGAAGAGATGCTCCGCATACAGCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGATAAAGAAAAATAAGGAAGAGATGCTCCGCATACAGCATGT  450

seq1  GCTCTTATTGTATTGTGTTATATTATTTATTGCCAGTCTCTTCCTGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTATTGTATTGTGTTATATTATTTATTGCCAGTCTCTTCCTGATTC  500

seq1  ATGTGCTTTGGGAATTTAATATGCATTGAG-TTTTCATGTCAGAGTCCTC  549
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATGTGCTTTGGGAATTTAATATGCATTGAGTTTTTCATGTCAGAGTCCTC  550

seq1  AAGAAGGATATATCAATATTTTA-TTTTTTTAAAAAGAGCAATAAATGAA  598
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGAATGATATATCAATATTTTATTTTTTTTAAAAAGAGCAATAAATGAA  600

seq1  GGTTGCTTCCTAATAAAAGGATTGTGG-TCTTTACAA-TTATGACAGTAT  646
       ||||||||| |||||||||||||||| ||||| ||| ||||||||||||
seq2  -GTTGCTTCCAAATAAAAGGATTGTGGTTCTTTTCAATTTATGACAGTAT  649

seq1  TTTCCTGT  654
      || |||||
seq2  TTCCCTGT  657