BAC Information

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BAC

Clone NameB6Ng01-011L14
Chromosome14 (Build37)
Map Location 105,478,539 - 105,561,399
singlet/doubletdoublet
Overlap geneRbm26
Upstream genePou4f1, 2610206B13Rik, D130009I18Rik, LOC435420
Downstream geneLOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011L14.bB6Ng01-011L14.g
ACCDH847027DH847028
length6681,094
definitionDH847027|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L14, 5' end.DH847028|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,560,732 - 105,561,399)(105,478,539 - 105,479,637)
sequence
gaattcagagatccacctgcctttgccttctgagtgctggcattaaaggg
ttgcaccaccatgcctagctaatctccttgttactttgatcccttaatat
tatatgtatttaaaagttattttaaatttttgtattgtcaggatctttaa
agatggtcttcctatgaattaagtagttgtttttgtaccaagccttcaca
ttaaatttaagctaggtgtctgtctgtttctcggtatttcgttgagtgga
tattaaaagggttctggaagcaaaggcatgggtgtgggagtctgaggaat
ttaggggctttgtgaaatagtggtctgtgaaaataagctagtaagggtag
agtgcaggatgtgagctaagggatctgccttgggttgcagctaaggctat
ccagaggtaaagccacagagggcttttacagaaaatagtctgggagatga
aatttgtggttgtaacactaggcatttagggaaatgaatggattatctgg
tttctgggcatttcattgcgaaggggcatccttctcagtttctgcctcac
cactagagtgtctgaaagccactgatttgccacttgggaggcaaaacaca
gtctaggatggaggtcccagcccatgtttctctggtgacaaacagcaggg
tggggattggggtggggg
gaattcattgagcaacctaagagatgttcaagtgttgtctcactgctgac
tggttgtagcaaagatctgacagtcaatacctggggcaggaagtacgatg
gaggaagttccaggcagagaaggatgcagagagaagaaatcaggagaatc
aatcgtgaacatggaaaggaacaggcccagactagaccagagcagggaga
taaagaactagcattgtggtgggttgtagactagaacagttggcttaaat
ttacatttggagactgccccagcaaaaagcctgggcttaaaacaacatag
aagtctccatgtcttattgaacagctggtgggatctgcagaaagtccagc
aatagggaccaagcatccaaacatatggggctgtgggggcatatttcaca
gtcaacccatcacataaggattgtttgctttctctttctctatccttcat
ctatgtctctacctggttagcttctcatgttcacttaggcaaactctatc
atatagacttgttccagaagagtttatggagataaactctttctgaacta
tggcatttctgaaaatataatatagctgactataagtacttccagagcag
tattccacaggccagtcagacatgatcttttttcttcttaaaatattttc
attggtctagtatgacagttcagtcaataaaggcacctacctcccaccaa
ggctaatgacctaagttcaattcctaagatacacatggtggaacaaaaga
tccaactctctcctggtgtcctttcacctccacatgtactccacagtgca
cacatacatgtgtgcacactcaaaatgcgcacacacacacacaaaatttt
gttgtatatatgcatttacatggtagtatgttacatctggacactttcat
actaatctacattgtatattgaccaaatacttctatcctctttcacattg
ctgtcctttttccaattcctcttaattagtcgcatttgtgtaataagttc
acttctctatttttcatacaccagatatcttatccttctataaaatatag
gttccacaaatctgaaaaaacattgttatttccttgagtcaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105560732_105561399
seq2: B6Ng01-011L14.b_45_712 (reverse)

seq1  CCCCCACCCCAATCCCCACCCTGCTGTTTGTCACCAGAGAAACATGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCCAATCCCCACCCTGCTGTTTGTCACCAGAGAAACATGGGCT  50

seq1  GGGACCTCCATCCTAGACTGTGTTTTGCCTCCCAAGTGGCAAATCAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTCCATCCTAGACTGTGTTTTGCCTCCCAAGTGGCAAATCAGTGG  100

seq1  CTTTCAGACACTCTAGTGGTGAGGCAGAAACTGAGAAGGATGCCCCTTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGACACTCTAGTGGTGAGGCAGAAACTGAGAAGGATGCCCCTTCG  150

seq1  CAATGAAATGCCCAGAAACCAGATAATCCATTCATTTCCCTAAATGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAATGCCCAGAAACCAGATAATCCATTCATTTCCCTAAATGCCTA  200

seq1  GTGTTACAACCACAAATTTCATCTCCCAGACTATTTTCTGTAAAAGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACAACCACAAATTTCATCTCCCAGACTATTTTCTGTAAAAGCCCT  250

seq1  CTGTGGCTTTACCTCTGGATAGCCTTAGCTGCAACCCAAGGCAGATCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTTTACCTCTGGATAGCCTTAGCTGCAACCCAAGGCAGATCCCT  300

seq1  TAGCTCACATCCTGCACTCTACCCTTACTAGCTTATTTTCACAGACCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCACATCCTGCACTCTACCCTTACTAGCTTATTTTCACAGACCACT  350

seq1  ATTTCACAAAGCCCCTAAATTCCTCAGACTCCCACACCCATGCCTTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACAAAGCCCCTAAATTCCTCAGACTCCCACACCCATGCCTTTGCT  400

seq1  TCCAGAACCCTTTTAATATCCACTCAACGAAATACCGAGAAACAGACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAACCCTTTTAATATCCACTCAACGAAATACCGAGAAACAGACAGA  450

seq1  CACCTAGCTTAAATTTAATGTGAAGGCTTGGTACAAAAACAACTACTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGCTTAAATTTAATGTGAAGGCTTGGTACAAAAACAACTACTTAA  500

seq1  TTCATAGGAAGACCATCTTTAAAGATCCTGACAATACAAAAATTTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGGAAGACCATCTTTAAAGATCCTGACAATACAAAAATTTAAAAT  550

seq1  AACTTTTAAATACATATAATATTAAGGGATCAAAGTAACAAGGAGATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAAATACATATAATATTAAGGGATCAAAGTAACAAGGAGATTAG  600

seq1  CTAGGCATGGTGGTGCAACCCTTTAATGCCAGCACTCAGAAGGCAAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCATGGTGGTGCAACCCTTTAATGCCAGCACTCAGAAGGCAAAGGC  650

seq1  AGGTGGATCTCTGAATTC  668
      ||||||||||||||||||
seq2  AGGTGGATCTCTGAATTC  668

seq1: chr14_105478539_105479637
seq2: B6Ng01-011L14.g_67_1160

seq1  GAATTCATTGAGCAACCTAAGAGATGTTCAAGTGTTGTCTCACTGCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAGCAACCTAAGAGATGTTCAAGTGTTGTCTCACTGCTGAC  50

seq1  TGGTTGTAGCAAAGATCTGACAGTCAATACCTGGGGCAGGAAGTACGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTAGCAAAGATCTGACAGTCAATACCTGGGGCAGGAAGTACGATG  100

seq1  GAGGAAGTTCCAGGCAGAGAAGGATGCAGAGAGAAGAAATCAGGAGAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGTTCCAGGCAGAGAAGGATGCAGAGAGAAGAAATCAGGAGAATC  150

seq1  AATCGTGAACATGGAAAGGAACAGGCCCAGACTAGACCAGAGCAGGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTGAACATGGAAAGGAACAGGCCCAGACTAGACCAGAGCAGGGAGA  200

seq1  TAAAGAACTAGCATTGTGGTGGGTTGTAGACTAGAACAGTTGGCTTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACTAGCATTGTGGTGGGTTGTAGACTAGAACAGTTGGCTTAAAT  250

seq1  TTACATTTGGAGACTGCCCCAGCAAAAAGCCTGGGCTTAAAACAACATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTGGAGACTGCCCCAGCAAAAAGCCTGGGCTTAAAACAACATAG  300

seq1  AAGTCTCCATGTCTTATTGAACAGCTGGTGGGATCTGCAGAAAGTCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCCATGTCTTATTGAACAGCTGGTGGGATCTGCAGAAAGTCCAGC  350

seq1  AATAGGGACCAAGCATCCAAACATATGGGGCTGTGGGGGCATATTTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGACCAAGCATCCAAACATATGGGGCTGTGGGGGCATATTTCACA  400

seq1  GTCAACCCATCACATAAGGATTGTTTGCTTTCTCTTTCTCTATCCTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACCCATCACATAAGGATTGTTTGCTTTCTCTTTCTCTATCCTTCAT  450

seq1  CTATGTCTCTACCTGGTTAGCTTCTCATGTTCACTTAGGCAAACTCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCTCTACCTGGTTAGCTTCTCATGTTCACTTAGGCAAACTCTATC  500

seq1  ATATAGACTTGTTCCAGAAGAGTTTATGGAGATAAACTCTTTCTGAACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGACTTGTTCCAGAAGAGTTTATGGAGATAAACTCTTTCTGAACTA  550

seq1  TGGCATTTCTGAAAATATAATATAGCTGACTATAAGTACTTCCAGAGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTCTGAAAATATAATATAGCTGACTATAAGTACTTCCAGAGCAG  600

seq1  TATTCCACAGGCCAGTCAGACATGATCTTTTTTCTTCTTAAAATATTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACAGGCCAGTCAGACATGATCTTTTTTCTTCTTAAAATATTTTC  650

seq1  ATTGGTCTAGTATGACAGTTCAGTCAATAAAGGCACCTACCTCCCACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCTAGTATGACAGTTCAGTCAATAAAGGCACCTACCTCCCACCAA  700

seq1  GGCTAATGACCTAAGTTCAATTCCTAAGATACACATGGTGGAACAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATGACCTAAGTTCAATTCCTAAGATACACATGGTGGAACAAAAGA  750

seq1  TCCAACTCTCTCCTGGTGTCCTTTCACCTCCACATGTACTCCACAGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTCTCTCCTGGTGTCCTTTCACCTCCACATGTACTCCACAGTGCA  800

seq1  CACATACATGTGTGCACACTC-AAATGCGCACACACACACACAAAATTTT  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CACATACATGTGTGCACACTCAAAATGCGCACACACACACACAAAATTTT  850

seq1  GTTGTATATATGCATTTACATGGTAGTATGTTACATCTGGACACTTTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATATATGCATTTACATGGTAGTATGTTACATCTGGACACTTTCAT  900

seq1  ACTAATCTACATTGTATATTGACCAAATACTCCTATCCCCTTCCACATTG  949
      ||||||||||||||||||||||||||||||| |||||| ||| |||||||
seq2  ACTAATCTACATTGTATATTGACCAAATACTTCTATCCTCTTTCACATTG  950

seq1  CTGTCCCTTTTCCCATTCCTCCTTAATTAGTCCCATTTGTTGTAATAAGT  999
      |||||| |||||| |||||| ||||||||||| |||||| ||||||||| 
seq2  CTGTCCTTTTTCCAATTCCT-CTTAATTAGTCGCATTTG-TGTAATAAG-  997

seq1  TTCACTTCTCTTATTTTCATACACACAGATTATCTTATCTCTCTATAAAA  1049
      |||||||||||  ||||||||||| |||| |||||||||  |||||||||
seq2  TTCACTTCTCTATTTTTCATACAC-CAGA-TATCTTATCCTTCTATAAAA  1045

seq1  TATAGGTTCCACAAATCTGAAAAACACA-TGTTATCTACTTGAGGTCAAT  1098
      |||||||||||||||||||||||| ||| |||||| | ||||| ||||||
seq2  TATAGGTTCCACAAATCTGAAAAA-ACATTGTTATTTCCTTGA-GTCAAT  1093

seq1  C  1099
      |
seq2  C  1094