BAC Information

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BAC

Clone NameB6Ng01-012C06
Chromosome14 (Build37)
Map Location 97,027,131 - 97,028,231
singlet/doubletsinglet
Overlap genenone
Upstream gene4921530L21Rik, Klhl1
Downstream geneLOC100043366, LOC668654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012C06.bB6Ng01-012C06.g
ACCDH847312DH847313
length1,2711,087
definitionDH847312|Mus musculus domesticus DNA, BAC clone: B6Ng01-012C06, 5' end.DH847313|Mus musculus domesticus DNA, BAC clone: B6Ng01-012C06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcacaacattctttttcaaaattttatattggatattttcttt
atttacatttcaaatgttatcccctttcctgacaccccctccaagaaacc
cctatcccatgcaccttcctccagcttctatgagggtgttcccctaccca
cccacccactcctgactccctgcccttgaattacccaacactggggcatc
catcaagccttcacagggccaagggcctctcctcccacggatgcatgaca
aggccatcctctgctacatgtgcagctgtagccacggctccctccatgtt
tactccttggctgatggcttagtccctgtgtgatttgggtgggagaaagg
ggatctggttggttgatactgttgttcttcctatggggttgcaaaccctt
tcagctacttcagtcctttctctaactccttgattggggacccagtgctc
agtccagtggttgcctgtgaacatccacatgcaggctctgacagagtctt
tcaggagacagctatatcaggctcttgtcagcaagctcttcttggcatcc
acaataatgtctgggtttggtgactgtatatgggatcgatccccaggtgg
ggcagtctctgtttggcttttccttcagtctctgctctacactttgtctc
catatttgctaccatgaatattttcttcccctttctaagaaggaccgaag
cacccacactttggtcttccttcttcttaagcttcatatggtctgtgaat
tgtattttgggtattccaaggttttgggctaatattgatttttcagtgag
tgcataccatgtgtgttcttttgtgattgggttacctcactcaggatgat
attttctagtttcatccattttgcctaagaacttcatgaagccattgttt
ttaatagctgagtagtacttcattgtgcaaatataccacattttctgtat
ccattcctttatgaagaacatctgggtctttaacagcttctggctattat
aaataaggctgctatgaacataggtggaagcgtggtgtccttgaataatg
ttggaggatcatttggttatatacttaggagaggtatgcctgggtccctc
aggtaaactatttcccattttcgagagaattcactaggctgtgatttcca
gagggtttgcaatcccccacatggagagaaagttcccttttcctcacatc
ctccacagactctgcgtgaccaccgaatagtaacgagtcatatctcgact
aggtgcagaagagcagactac
gaattcagttttgtgtgccatttggttttgagagataaatgaacaaaatt
tcattatgtgaaattctagactaattacataaatacatgattgttaaaca
gaagagactcagtatactttgcttcaaagttgctttgataaacaccatga
tcaaaaacaactcagtcaagacagatttgtttgactttgactccctagta
gcaatctatcactgaggaatgttagggcatggtctcaacatagaaacctg
gagacagaaactgaagtagagaccttggagggacactaacctctcagttc
ttcctacttctacttatcaagctttcttatgaaacctaggaccacctaga
caagcatggcatcactctcagtgaactagaaccatcaattagcaatcaag
aggatgcccctcacacacgcccacaggtcaactgaagacaatttctagat
gaaattctctctacccagatatgtcaagttgataaccaagaatttccatc
acataaggaatatagattgtggtagagacagttaatataatttactgtta
ctcttactctcagatgtcagacactgctaattgataagagcattatacta
atccaaatttggatatattttaaaagaatctaagcattttctaaaaacca
ggtgttctccaggaaatgtgttagtttacaaattacacttgttcaataaa
gtggttctctaagattcatgcatttaggaggcctgggtagttggctaggg
ttcagtaccagacatgatttctttgttgttgagcaagtctttagagggct
gttgggtactgcatgataggtgaaagacactactgtatccttagaattat
catgccataatggtctttgttgtgggtcgtaggcataatagctagattga
aatgttggtaggcttacaagcttgcatattgccttctggtaccagaaatc
tagtactctggaatgagtctttcaaatcagttcccacacagagtttctga
tgctgtttctgaatataggtgtctttgtcaaaggagacaatatttgacag
aacgcgagaatagatgtattattaggagtcctctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97027131_97028231
seq2: B6Ng01-012C06.g_64_1150

seq1  GAATTCAGTTTTGTGTGCCATTTGGTTTTGAGAGATAAATGAACAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTGTGTGCCATTTGGTTTTGAGAGATAAATGAACAAAATT  50

seq1  TCATTATGTGAAATTCTAGACTAATTACATAAATACATGATTGTTAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATGTGAAATTCTAGACTAATTACATAAATACATGATTGTTAAACA  100

seq1  GAAGAGACTCAGTATACTTTGCTTCAAAGTTGCTTTGATAAACACCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGACTCAGTATACTTTGCTTCAAAGTTGCTTTGATAAACACCATGA  150

seq1  TCAAAAACAACTCAGTCAAGACAGATTTGTTTGACTTTGACTCCCTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACAACTCAGTCAAGACAGATTTGTTTGACTTTGACTCCCTAGTA  200

seq1  GCAATCTATCACTGAGGAATGTTAGGGCATGGTCTCAACATAGAAACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTATCACTGAGGAATGTTAGGGCATGGTCTCAACATAGAAACCTG  250

seq1  GAGACAGAAACTGAAGTAGAGACCTTGGAGGGACACTAACCTCTCAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAAACTGAAGTAGAGACCTTGGAGGGACACTAACCTCTCAGTTC  300

seq1  TTCCTACTTCTACTTATCAAGCTTTCTTATGAAACCTAGGACCACCTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACTTCTACTTATCAAGCTTTCTTATGAAACCTAGGACCACCTAGA  350

seq1  CAAGCATGGCATCACTCTCAGTGAACTAGAACCATCAATTAGCAATCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATGGCATCACTCTCAGTGAACTAGAACCATCAATTAGCAATCAAG  400

seq1  AGGATGCCCCTCACACACGCCCACAGGTCAACTGAAGACAATTTCTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCCCCTCACACACGCCCACAGGTCAACTGAAGACAATTTCTAGAT  450

seq1  GAAATTCTCTCTACCCAGATATGTCAAGTTGATAACCAAGAATTTCCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTCTCTACCCAGATATGTCAAGTTGATAACCAAGAATTTCCATC  500

seq1  ACATAAGGAATATAGATTGTGGTAGAGACAGTTAATATAATTTACTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGGAATATAGATTGTGGTAGAGACAGTTAATATAATTTACTGTTA  550

seq1  CTCTTACTCTCAGATGTCAGACACTGCTAATTGATAAGAGCATTATACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACTCTCAGATGTCAGACACTGCTAATTGATAAGAGCATTATACTA  600

seq1  ATCCAAATTTGGATATATTTTAAAAGAATCTAAGCATTTTCTAAAAACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAATTTGGATATATTTTAAAAGAATCTAAGCATTTTCTAAAAACCA  650

seq1  GGTGTTCTCCAGGAAATGTGTTAGTTTACAAATTACACTTGTTCAATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCTCCAGGAAATGTGTTAGTTTACAAATTACACTTGTTCAATAAA  700

seq1  GTGGTTCTCTAAGATTCATGCATTTAGGAGGCCTGGGTAGTTGGCTAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCTCTAAGATTCATGCATTTAGGAGGCCTGGGTAGTTGGCTAGGG  750

seq1  TTCAGTACCAGACATGATTTCTTTGTTGTTGAGCAAGTCTTTAGAGGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTACCAGACATGATTTCTTTGTTGTTGAGCAAGTCTTTAGAGGGCT  800

seq1  GTTGGGTACTGCATGATAGGTGAAAGACACTACTGTATCCTTAGAATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTACTGCATGATAGGTGAAAGACACTACTGTATCCTTAGAATTAT  850

seq1  CATGCCATAATGGTCTTTGTTGTGGGTCGTAGGCATAATAGCTAGATTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCATAATGGTCTTTGTTGTGGGTCGTAGGCATAATAGCTAGATTGA  900

seq1  AATGTTGGTAGGCTTACAAGCTTGCATATTGCCTTCTGGTACCAAGAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AATGTTGGTAGGCTTACAAGCTTGCATATTGCCTTCTGGTACC-AGAAAT  949

seq1  CTAGTACTCTGGAATGAGTCTTTCAAATCAGTTCCCACACAGAGGTTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAGTACTCTGGAATGAGTCTTTCAAATCAGTTCCCACACAGA-GTTTCT  998

seq1  GGATGCTGTTTCTGAAATATAGGGTGTCTTTGTCAAAAGGAGACAAATAT  1050
       ||||||||||||| |||||| |||||||||||| ||||||||| |||||
seq2  -GATGCTGTTTCTG-AATATA-GGTGTCTTTGTC-AAAGGAGAC-AATAT  1043

seq1  TTGACAAGGAAACGCAGAGAAATAGAATGTATTATTTTAGGAGT-CTCTG  1099
      ||||||    ||||| ||| ||||| ||||||||  |||||||| |||||
seq2  TTGACA---GAACGC-GAG-AATAG-ATGTATTA--TTAGGAGTCCTCTG  1085

seq1  AG  1101
      ||
seq2  AG  1087