BAC Information

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BAC

Clone NameB6Ng01-012J04
Chromosome14 (Build37)
Map Location 83,842,498 - 83,843,668
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012J04.bB6Ng01-012J04.g
ACCDH847629DH847630
length1,2161,157
definitionDH847629|Mus musculus domesticus DNA, BAC clone: B6Ng01-012J04, 5' end.DH847630|Mus musculus domesticus DNA, BAC clone: B6Ng01-012J04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaagcctgataaacagcttcaatgaagtagctggatatacaat
taactcaaacaagtcaatggcctttctgtgcacaaaggataaacaggctg
agaaagaaattagggaaacaacacccttctcaatagtcacaaataatata
aaatacctaggcatgactcttactaaggaagtgaaagatctgtatggtaa
gaacttcaagtctctgaagaaagaaattaaagaagatctcagaagatgga
aagatctcccatgctcatggactggcaggatcaacattgtaaaaacggct
atcttgccaaaagcagtctacagattcaatacaatttccatcaacattcc
aactcaattcttcaacgaattttaaagagcaatctgcaaattcatctaaa
ataacaaaaaacctagcatagcaaaaactcttctcaaggataaaagaaca
tctgttggaatcaccatgcctgacctaaagctttactacagagcaattgt
gataaaaactgtgtgttactggtatagcaacaaacaagtagaccaatgga
atagaattgaagacccagagatgaacccacacacctatggtcatttgatc
tttgacaagtggaaaaaagacagcattttcaacaaatggtgctggcacaa
ctggctgttgtcatgtagaagaattcgaattgatccattcctatctcctt
gtactaaggtcaaatctaagtggattaaggaactccacctaaaaccagag
acagtgaaacttatagaggagaaagtagggaaaagcctcgaagatatggg
tacaggggaaaagttcttgaaaagaacagcaatggcttgtgcagtaagat
agagaattgataaatgggacctcataaaggtgaaaagcttctgcaaggca
aaagacaccgtcaacaagacaaaaagaccaccaacatattggaaagggat
ctttacctatcctaaatcagataggggactgatatccaatttaaataaga
actcaagaggggtgggctccagaaaaatcaaataacccatttaaaatggg
gctcagactgaacaaagaattctcacctgagatactaatgcagagaagca
cctgaaaaatcacatctaatcatcaggaatgcatcaacctaccttagatt
ccacctcacagtcgatggcttagacagtcaggtacgcgatgctatgcgag
gatatgtgcaagatgg
gaattcaatgcctttaagcacagtgctgcaggacatttcaaaatcactgt
taatgcttcagagaatggatgaggatcaaatgaattgcatagattagata
taaatggaacaagaaataagcaaacgtgaagaatatgctttcaaaaatgt
tgctattttataaacaacagcaatcatttcctcatgttcctgggctattg
aatttcaaacaaacctaagaaaaactaaagcaaggaggtttactgcacct
attctatcattgagtccaatgccccccaaggtcttaaaagcctgtgattg
acagtatcaaggcacctcttgtttcttttcttctaccagctcagaactcc
tagcaactaaacatttttttccaaaataaatgcatacatatacatgcatt
tgtatatgtatctagaaaatcaatttcttaactctattcattaagaatga
tgagagttgttctatcacaattcctaccataaacagtgacactattagta
ggttgtttttttttttttcttttaagcaaaataatctttacttattgata
gatttgctagttaaatagccaaggtgataactagtatattttaagtgtta
aatatttcataaagctgaagacagctcaagtgagtaaatgtgtatcgtga
agaggaatatatcatagcaagtagactgtaatagagaaaggtgctgaaca
aacaaaccgtcagatgagtaagatttatcaagaactctgaagaatgtgtg
gtgcaaatattggatggcatgctatgaaaacctttgctgtgtcttggctg
cagtgtcttagatataaaacatcataatatatacatttcacaaatgtata
ttatataatatgatcgtcacacatcagacactccattccactgaatcaca
tgttgctaattttattcttgcaaaattgtgtgaaaaagtagttttaattt
ctgggtgtaaaataagcaactaatgatatctaaacattataggagatact
cctgatgctagaaacttctggcaactgcagatgcagctgtgaaaaggcaa
gaacaaacatacatgctgaatagcatttggtttctggacactggcttctt
tagggacccttctctgactctatatccttaaggctcaagaaggtcctagc
ttaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83842498_83843668
seq2: B6Ng01-012J04.g_66_1222 (reverse)

seq1  CAGTTTAAAGCTA-GACATTCTTTTGAGCCCTATAAGAGATATAGAGTCA  49
      |||||  |||||| ||| |||  |||||||   |||| ||||||||||||
seq2  CAGTT--AAGCTAGGACCTTC--TTGAGCC--TTAAG-GATATAGAGTCA  43

seq1  GGAAGGAAAGGGTCCCAAAAAGAAGCCAGTGT-CAGAAA-CACATGCTAT  97
      |  ||  |||||||||  |||||||||||||| |||||| || |||||||
seq2  G--AG--AAGGGTCCC-TAAAGAAGCCAGTGTCCAGAAACCAAATGCTAT  88

seq1  TCAGCAATGTATTGTTTGTTCTTGGCTTTTTCACAGCTGCATCTGCAGTT  147
      ||||| ||||| ||||||||||| || |||||||||||||||||||||||
seq2  TCAGC-ATGTA-TGTTTGTTCTT-GCCTTTTCACAGCTGCATCTGCAGTT  135

seq1  GCCAGAAGTTTCTAGCATCAGGAGTATCTCCTATAAATGTATAGATATCA  197
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  GCCAGAAGTTTCTAGCATCAGGAGTATCTCCTAT-AATGTTTAGATATCA  184

seq1  TTAGTTGCTTATTTTACACCCAGAAATTAAAACTACTTTTTCAACACAAT  247
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTAGTTGCTTATTTTACACCCAGAAATTAAAACTACTTTTTC-ACACAAT  233

seq1  TTTGCAAGAATAAAATTAGCAACATGTGATTCAGTGGAATGGAGTGTCTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAGAATAAAATTAGCAACATGTGATTCAGTGGAATGGAGTGTCTG  283

seq1  ATGTGTGACGATCATATTATATAATATACATTTGTGAAATGTATATATTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGACGATCATATTATATAATATACATTTGTGAAATGTATATATTA  333

seq1  TGATGTTTTATATCTAAGACACTGCAGCCAAGACACAGCAAAGGTTTTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTTATATCTAAGACACTGCAGCCAAGACACAGCAAAGGTTTTCA  383

seq1  TAGCATGCCATCCAATATTTGCACCACACATTCTTCAGAGTTCTTGATAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGCCATCCAATATTTGCACCACACATTCTTCAGAGTTCTTGATAA  433

seq1  ATCTTACTCATCTGACGGTTTGTTTGTTCAGCACCTTTCTCTATTACAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACTCATCTGACGGTTTGTTTGTTCAGCACCTTTCTCTATTACAGT  483

seq1  CTACTTGCTATGATATATTCCTCTTCACGATACACATTTACTCACTTGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGCTATGATATATTCCTCTTCACGATACACATTTACTCACTTGAG  533

seq1  CTGTCTTCAGCTTTATGAAATATTTAACACTTAAAATATACTAGTTATCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCAGCTTTATGAAATATTTAACACTTAAAATATACTAGTTATCA  583

seq1  CCTTGGCTATTTAACTAGCAAATCTATCAATAAGTAAAGATTATTTTGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTATTTAACTAGCAAATCTATCAATAAGTAAAGATTATTTTGCT  633

seq1  TAAAAGAAAAAAAAAAAAACAACCTACTAATAGTGTCACTGTTTATGGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAAAAAAAAAAAACAACCTACTAATAGTGTCACTGTTTATGGTA  683

seq1  GGAATTGTGATAGAACAACTCTCATCATTCTTAATGAATAGAGTTAAGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGTGATAGAACAACTCTCATCATTCTTAATGAATAGAGTTAAGAA  733

seq1  ATTGATTTTCTAGATACATATACAAATGCATGTATATGTATGCATTTATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTTCTAGATACATATACAAATGCATGTATATGTATGCATTTATT  783

seq1  TTGGAAAAAAATGTTTAGTTGCTAGGAGTTCTGAGCTGGTAGAAGAAAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAAAAATGTTTAGTTGCTAGGAGTTCTGAGCTGGTAGAAGAAAAG  833

seq1  AAACAAGAGGTGCCTTGATACTGTCAATCACAGGCTTTTAAGACCTTGGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGAGGTGCCTTGATACTGTCAATCACAGGCTTTTAAGACCTTGGG  883

seq1  GGGCATTGGACTCAATGATAGAATAGGTGCAGTAAACCTCCTTGCTTTAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTGGACTCAATGATAGAATAGGTGCAGTAAACCTCCTTGCTTTAG  933

seq1  TTTTTCTTAGGTTTGTTTGAAATTCAATAGCCCAGGAACATGAGGAAATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTAGGTTTGTTTGAAATTCAATAGCCCAGGAACATGAGGAAATG  983

seq1  ATTGCTGTTGTTTATAAAATAGCAACATTTTTGAAAGCATATTCTTCACG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTTGTTTATAAAATAGCAACATTTTTGAAAGCATATTCTTCACG  1033

seq1  TTTGCTTATTTCTTGTTCCATTTATATCTAATCTATGCAATTCATTTGAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTATTTCTTGTTCCATTTATATCTAATCTATGCAATTCATTTGAT  1083

seq1  CCTCATCCATTCTCTGAAGCATTAACAGTGATTTTGAAATGTCCTGCAGC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCATTCTCTGAAGCATTAACAGTGATTTTGAAATGTCCTGCAGC  1133

seq1  ACTGTGCTTAAAGGCATTGAATTC  1171
      ||||||||||||||||||||||||
seq2  ACTGTGCTTAAAGGCATTGAATTC  1157