BAC Information

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BAC

Clone NameB6Ng01-014A01
Chromosome14 (Build37)
Map Location 110,848,810 - 110,966,321
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014A01.bB6Ng01-014A01.g
ACCDH848673DH848674
length966789
definitionDH848673|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A01, 5' end.DH848674|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,965,355 - 110,966,321)(110,848,810 - 110,849,598)
sequence
gaattcttacagtatatgagaagataatcagctttttcctggtaggtctt
atcatacctgatgcacaacagaaggtccctctgcccattgctttgttcct
gtttcaaaataaacattaaacacaattaaatttattcatctgaaaaggat
gtatgttatgtgtgtattcttatataattatgatatatatatatacatat
atatatgtatatatatgtatatatatacatggaatggtacaataatattg
taatgataaaaatatatttcttaacagcccctaattaaattaaaaaatat
tttggaggagaagcatgagataatttgcccataagcatagctgacatttg
actttgtagtattggaaaaaatttaaagtatgaaatgatcaatagactat
gttgtgaagtaatgattaaaaactgaggacttcactggcaagtttgaaat
ggccaactgaaaagtagacagactgctacttcaatagtcttcattcagaa
ggcatcccgatgtgttgatgtaatagcctgaaaatggagtgacctgcctg
cctctattacaaagaatcctttgactctttgaaaggggattctttgggga
tcacataaacatggcacaacatgaaaaattgtgtccttaagtgtttttat
atttttcttcgtaaacagtaactcaaataaattggctgctaaggttaatg
tgtttgtttaagaatattagggtttcacattatataatatttgctgtccc
tctgcactcaaataaattatactttgtgacactctgggcaaaaaaaaaat
cagtaagtcaaaactgagtatttactctgtctagactcaagtaaatacat
cgcacccaattttatgaataaatatagagtacttgttttgagcatggatt
cactttatctgactcaatcttggcagaactcgaatggttgacttggatct
tcatgggacttcagat
gaattcactccgctaataacagaggcaaaacagacacctttagaaaaaaa
agttcctggtattcaatccacctgagtgacttgaattataggcatcgtag
cagaaatgtattaagtgcaaatcacaatagtaattaacctatgttgaaat
gagtgttcgcataatttataaaagtgtatttatttactgttaaaatctct
gtaactattctgttattagatactctatattgcaggtatagtacgacgtt
gagttattcaatactctacattgcaggtgtagtactacattaagttagta
gatactctatattgcaggtgacttctccagcaccctctctccgactccat
ttcctttttagcagaagttaagtgcaagttctaccactaatttaccatta
cacagaattacctggcttgttaaacactttgaacatttttttcattgtta
taattatgcagcaaactaattactaaaatttagagaaaaatatttaatct
aaaggaatgtagaaattaatctagacagttaattagactctctctctctc
tctctctctctctctctctatatatatatatatatatatatatatatata
tatttaaaattactctactttgttctcatggggaacatgcttgttttctt
ttcttataatttttatatatttttattttttgtataagatgttttcttta
tttacatttcaaatgttatccccttcctgctttcccctctgaaaacctat
ccactcccccttcccctgcttcttcacccacccattctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110965355_110966321
seq2: B6Ng01-014A01.b_32_997 (reverse)

seq1  ATCTGGAAGTCCCATGAAGATTCAAGTCAACCATTCGAGTTCTGGCAAAG  50
      |||| |||||||||||||||| ||||||||||||||||||||| || |||
seq2  ATCT-GAAGTCCCATGAAGATCCAAGTCAACCATTCGAGTTCT-GCCAAG  48

seq1  ATTGAGTCAGAT-AAGTGAATCCCATGCTTCAAACAAGTACTCTATTATT  99
      |||||||||||| |||||||| |||||||  |||||||||||||| ||||
seq2  ATTGAGTCAGATAAAGTGAAT-CCATGCTCAAAACAAGTACTCTA-TATT  96

seq1  TATTCATAAAATTGGGTGACGATGTATTTACTTGAGTCTAGACAGAGTAA  149
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATTCATAAAATTGGGTG-CGATGTATTTACTTGAGTCTAGACAGAGTAA  145

seq1  TTACTCAGTTTTGACTTACTGATTTTTTTTTTG-CCAGAGTGTCACAAAG  198
       |||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATACTCAGTTTTGACTTACTGATTTTTTTTTTGCCCAGAGTGTCACAAAG  195

seq1  TATAATTTTATTTGAGTGCAGAGGGACAGCAAATATTATATAATGTGAAA  248
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAA-TTTATTTGAGTGCAGAGGGACAGCAAATATTATATAATGTGAAA  244

seq1  CCCTAATATTCTT-AACAAACACATTAACCTTAGCAGCCAATTTATTTGA  297
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCCTAATATTCTTAAACAAACACATTAACCTTAGCAGCCAATTTATTTGA  294

seq1  GTTACTGTTTACGAAG-AAAATAT-AAAACACTTAAGGACACAATTTTTC  345
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  GTTACTGTTTACGAAGAAAAATATAAAAACACTTAAGGACACAATTTTTC  344

seq1  ATGTTGTGCCATGTTTATGTGATCCCCAAAGAATCCCCTTTCAAAGAGTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGCCATGTTTATGTGATCCCCAAAGAATCCCCTTTCAAAGAGTC  394

seq1  AAAGGATTCTTTGTAATAGAGGCAGGCAGGTCACTCCATTTTCAGGCTAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATTCTTTGTAATAGAGGCAGGCAGGTCACTCCATTTTCAGGCTAT  444

seq1  TACATCAACACATCGGGATGCCTTCTGAATGAAGACTATTGAAGTAGCAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAACACATCGGGATGCCTTCTGAATGAAGACTATTGAAGTAGCAG  494

seq1  TCTGTCTACTTTTCAGTTGGCCATTTCAAACTTGCCAGTGAAGTCCTCAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTACTTTTCAGTTGGCCATTTCAAACTTGCCAGTGAAGTCCTCAG  544

seq1  TTTTTAATCATTACTTCACAACATAGTCTATTGATCATTTCATACTTTAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATCATTACTTCACAACATAGTCTATTGATCATTTCATACTTTAA  594

seq1  ATTTTTTCCAATACTACAAAGTCAAATGTCAGCTATGCTTATGGGCAAAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCAATACTACAAAGTCAAATGTCAGCTATGCTTATGGGCAAAT  644

seq1  TATCTCATGCTTCTCCTCCAAAATATTTTTTAATTTAATTAGGGGCTGTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATGCTTCTCCTCCAAAATATTTTTTAATTTAATTAGGGGCTGTT  694

seq1  AAGAAATATATTTTTATCATTACAATATTATTGTACCATTCCATGTATAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATATTTTTATCATTACAATATTATTGTACCATTCCATGTATAT  744

seq1  ATATACATATATATACATATATATATGTATATATATATATCATAATTATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATATATATACATATATATATGTATATATATATATCATAATTATA  794

seq1  TAAGAATACACACATAACATACATCCTTTTCAGATGAATAAATTTAATTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATACACACATAACATACATCCTTTTCAGATGAATAAATTTAATTG  844

seq1  TGTTTAATGTTTATTTTGAAACAGGAACAAAGCAATGGGCAGAGGGACCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATGTTTATTTTGAAACAGGAACAAAGCAATGGGCAGAGGGACCT  894

seq1  TCTGTTGTGCATCAGGTATGATAAGACCTACCAGGAAAAAGCTGATTATC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTGCATCAGGTATGATAAGACCTACCAGGAAAAAGCTGATTATC  944

seq1  TTCTCATATACTGTAAGAATTC  967
      ||||||||||||||||||||||
seq2  TTCTCATATACTGTAAGAATTC  966

seq1: chr14_110848810_110849598
seq2: B6Ng01-014A01.g_53_841

seq1  GAATTCACT-TGCTAATAACAGAGGCAAAACAGACACCTTTAGAAAAAAA  49
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCGCTAATAACAGAGGCAAAACAGACACCTTTAGAAAAAAA  50

seq1  AGTTCCTGGTATTCAATCCACCTGAGTGACTTGAATTATAGGCATCGTAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTGGTATTCAATCCACCTGAGTGACTTGAATTATAGGCATCGTAG  100

seq1  CAGAAATGTATTAAGTGCAAATCACAATAGTAATTAACCTATGTTGAAAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGTATTAAGTGCAAATCACAATAGTAATTAACCTATGTTGAAAT  150

seq1  GAGTGTTCGCATAATTTATAAAAGTGTATTTATTTACTGTTAAAATCTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTCGCATAATTTATAAAAGTGTATTTATTTACTGTTAAAATCTCT  200

seq1  GTAACTATTCTGTTATTAGATACTCTATATTGCAGGTATAGTACGACGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATTCTGTTATTAGATACTCTATATTGCAGGTATAGTACGACGTT  250

seq1  GAGTTATTCAATACTCTACATTGCAGGTGTAGTACTACATTAAGTTAGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATTCAATACTCTACATTGCAGGTGTAGTACTACATTAAGTTAGTA  300

seq1  GATACTCTATATTGCAGGTGACTTCTCCAGCACCCTCTCTCCGACTCCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCTATATTGCAGGTGACTTCTCCAGCACCCTCTCTCCGACTCCAT  350

seq1  TTCCTTTTTAGCAGAAGTTAAGTGCAAGTTCTACCACTAATTTACCATTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTAGCAGAAGTTAAGTGCAAGTTCTACCACTAATTTACCATTA  400

seq1  CACAGAATTACCTGGCTTGTTAAACACTTTGAACATTTTTTTCATTGTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATTACCTGGCTTGTTAAACACTTTGAACATTTTTTTCATTGTTA  450

seq1  TAATTATGCAGCAAACTAATTACTAAAATTTAGAGAAAAATATTTAATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGCAGCAAACTAATTACTAAAATTTAGAGAAAAATATTTAATCT  500

seq1  AAAGGAATGTAGAAATTAATCTAGACAGTTAATTAGACTCTCTCTCTCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATGTAGAAATTAATCTAGACAGTTAATTAGACTCTCTCTCTCTC  550

seq1  TCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATA  600

seq1  TATTTAAAATTACTCTACTTTGTTCTCATGGGGAACATGCTTGTTTTCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAATTACTCTACTTTGTTCTCATGGGGAACATGCTTGTTTTCTT  650

seq1  TTCTTATAATTTTTATATATTTTTATTTTTTGTATTAGATGTTTTCTTTA  699
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCTTATAATTTTTATATATTTTTATTTTTTGTATAAGATGTTTTCTTTA  700

seq1  TTTACATTTCAAATGTTATCCCCTTTCCTGCTTTCCCCTCTGAAAACCTA  749
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTACATTTCAAATGTTATCCCC-TTCCTGCTTTCCCCTCTGAAAACCTA  749

seq1  TCCACTCCCCCTTCCCCTGCTCATCAACCCACCCAATCTC  789
      |||||||||||||||||||||  |  ||||||||| ||||
seq2  TCCACTCCCCCTTCCCCTGCTTCTTCACCCACCCATTCTC  789