BAC Information

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BAC

Clone NameB6Ng01-014K13
Chromosome14 (Build37)
Map Location 60,432,520 - 60,581,464
singlet/doubletdoublet
Overlap geneAtp8a2
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014K13.bB6Ng01-014K13.g
ACCDH849139DH849140
length1,1411,135
definitionDH849139|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K13, 5' end.DH849140|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,580,315 - 60,581,464)(60,432,520 - 60,433,660)
sequence
gaattcttttcagactttaaaatagtaaatcccatcatttataaagcatg
tatcatttatatgctagaaatgagcaagactaagaaaaacaaatgcagca
taatttcttatgtgaagtaaaaattattaaattcatgaaatcagggagca
gagcagggattgccaggagtggtggcattagggagatgtcactgaaatga
tacataattccagctaggcaagaagagtatgccccagagatatatcgtaa
agtataaagaccatgtttaatagcaatgtagtatctattgggaaattgac
aagaatagttttgaaatggtcttaaaacacagaaaaataaatatatgagg
gatctggttgcatgtattaacctgccttagtcattccacaacatgtatta
tctcagagcatcacacagagccctaaacttaatttccacaaaagaaatac
ttttggaaaattaccaggagttgaaagttcatgggctgctgaccagatgt
cacctgattgcaatatacgttggaatacaggctcttctttctcatggggt
cttatttttaagcttttcaacaaaggaaagatctcacaggctgggttcca
tttctgcgtctcaaagtgaccccatgctgtatgacctggggacacagtgc
tgagatgctgtgcctttttactgccttataaaataggatccgcagtgagc
ttctagcagttgtgaggatggtagaggaccaagtgggcagggcttaatga
gcacaccacactgcatgggggcatctcttactcctaaagccagaaattta
caattttaaagacatgtgcctttccataaacttactaacacttaagttaa
gaaggagccaaataaatcatagctttatgtagtcgcagtgacaaaatgca
taaagcaattcgtaggaggaatacttactctggtctggctttgagttcat
gaaggcactctagcttgcagctgtgcatgaacaagaagaaatttcctcta
tcagttagttctccctagagcatttatatcctgtagcatatgatatgtgg
agacggactgtcagtgttaccctcccatttttctgtgaaccactgtggtc
cactttggtatttgggcacacctacgtgagtgatttagcac
gaattcctaaaggttgcacacaccaaggtgtccccaggaatttaaaaaac
ctggctatgctttcatttactgaaccttttccatcaacacaccgagaaag
gttgtagagaaaggaaagtttcacttgtttttttttgctctgctgccgtc
atcatcaccatcataatcactaccaccaccgctaccaccatcctcatcgc
catcaccattatcatctcatcatcatcaccgtcatctccatcaacactat
tatcagcaccaccaccatcatcatcatcaacaacaacctatcatcgacac
tcctatgccttgctgacattgtgctcagctgaacaaggttctcttcagaa
acatatcgcacctgtagtgctatccttccaaacttaaaaggtgcagattt
agcacattcacagtttgtgaaatgtctgctaaactaactggtaccacttg
ccttcactacggaagattaaaaggccctaatttcatatccctatggaaac
catgttgcttctgagcatctgtctgtagacactgtttaatgggttgagca
gaaccttgccattcacttaatacctgcacaaactggaaggctgatgcctc
ccatacttcttaccaatgctttctctggactcttctgcagtagcaaagta
tcttttgaccattacaagagggagaagaggctagttgctagttttcactc
aacctaagtgttgtctctttggtaccctttctcctgactattctatccca
cagtcaggttctaaggggcagatgtctttctttctttttgtgtactggga
acaggactgaagagagggatgcgaggaaggagagctgaaagcacacgggt
gtggaactagctatgaagggcatctctttttctaaaaggtttatcctgcc
caaggctgcttttgctcctagaatgacccatttgagcccaaatgggttcc
tgggggctactagttaggacccagggattatatactacatagactttttg
gaggacatttaacgaaaccaatccaaaggcaattgaaggcttcgagaagc
gaaaagcagtgagatggacgttgtgaaagatctaagaaatgtgtagggat
gggacctccagagggtgggggaccgaaaaaggacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60580315_60581464
seq2: B6Ng01-014K13.b_42_1182 (reverse)

seq1  GTGCTAACTCACTCA-GTAGGTGTGCCCCCAAATAACAAAAGTGGA-CAC  48
      ||||||| ||||||| |||||||||  ||||||| || |||||||| |||
seq2  GTGCTAAATCACTCACGTAGGTGTG--CCCAAAT-ACCAAAGTGGACCAC  47

seq1  AGTAGATTCTACAGAAAAATGTGAGTGTAACTACCTGACAGTCTGTCTTC  98
      ||| | ||| ||||||||||| ||| |||||   ||||||||| ||| ||
seq2  AGT-GGTTC-ACAGAAAAATGGGAGGGTAAC--ACTGACAGTCCGTC-TC  92

seq1  CACATATCATATGCTACAGGATATAAATTGCTCTAGGGAGAACTAACTGA  148
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  CACATATCATATGCTACAGGATATAAA-TGCTCTAGGGAGAACTAACTG-  140

seq1  ATAGAGGAAATATCTTCTTG-TCATGGCACAGCTTGCAAGCTAGAGTGCC  197
      ||||||||||| |||||||| |||| ||||||| |||||||||||||| |
seq2  ATAGAGGAAATTTCTTCTTGTTCAT-GCACAGC-TGCAAGCTAGAGTG-C  187

seq1  CTTCATGAACTCAAAGCCAGACCAGAGTAAGTATTCCTCCTACGAATTGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGAACTCAAAGCCAGACCAGAGTAAGTATTCCTCCTACGAATTGC  237

seq1  TTTATGCATTTTGTCACTGCGACTACATAAAGCTATGATTTATTTGGCTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCATTTTGTCACTGCGACTACATAAAGCTATGATTTATTTGGCTC  287

seq1  CTTCTTAACTTAAGTGTTAGTAAGTTTATGG-AAGGCACATGTCTTTAAA  346
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTCTTAACTTAAGTGTTAGTAAGTTTATGGAAAGGCACATGTCTTTAAA  337

seq1  ATTGTAAATTTCTGGCTTTAGGAGTAAGAGATGCCCCCATGCAGTGTGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAATTTCTGGCTTTAGGAGTAAGAGATGCCCCCATGCAGTGTGGT  387

seq1  GTGCTCATTAAGCCCTGCCCACTTGGTCCTCTACCATCCTCACAACCTGC  446
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGCTCATTAAGCCCTGCCCACTTGGTCCTCTACCATCCTCACAA-CTGC  436

seq1  TAGAAGCTCACTGCGGATCCTATTTTATAAGGCAGTAAAAAGGCACAGCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTCACTGCGGATCCTATTTTATAAGGCAGTAAAAAGGCACAGCA  486

seq1  TCTCAGCACTGTGT-CCCAGGTCATACAGCATGGGGTCACTTTGAGACGC  545
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTCAGCACTGTGTCCCCAGGTCATACAGCATGGGGTCACTTTGAGACGC  536

seq1  AGAAATGGAACCCAGCCTGTGAGATCTTTCCTTTGTTGAAAAGCTTAAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGAACCCAGCCTGTGAGATCTTTCCTTTGTTGAAAAGCTTAAAA  586

seq1  ATAAGACCCCATGAGAAAGAAGAGCCTGTATTCCAACGTATATTGCAATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACCCCATGAGAAAGAAGAGCCTGTATTCCAACGTATATTGCAATC  636

seq1  AGGTGACATCTGGTCAGCAGCCCATGAACTTTCAACTCCTGGTAATTTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACATCTGGTCAGCAGCCCATGAACTTTCAACTCCTGGTAATTTTC  686

seq1  CAAAAGTATTTCTTTTGTGGAAATTAAGTTTAGGGCTCTGTGTGATGCTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTATTTCTTTTGTGGAAATTAAGTTTAGGGCTCTGTGTGATGCTC  736

seq1  TGAGATAATACATGTTGTGGAATGACTAAGGCAGGTTAATACATGCAACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAATACATGTTGTGGAATGACTAAGGCAGGTTAATACATGCAACC  786

seq1  AGATCCCTCATATATTTATTTTTCTGTGTTTTAAGACCATTTCAAAACTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCTCATATATTTATTTTTCTGTGTTTTAAGACCATTTCAAAACTA  836

seq1  TTCTTGTCAATTTCCCAATAGATACTACATTGCTATTAAACATGGTCTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTCAATTTCCCAATAGATACTACATTGCTATTAAACATGGTCTTT  886

seq1  ATACTTTACGATATATCTCTGGGGCATACTCTTCTTGCCTAGCTGGAATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTACGATATATCTCTGGGGCATACTCTTCTTGCCTAGCTGGAATT  936

seq1  ATGTATCATTTCAGTGACATCTCCCTAATGCCACCACTCCTGGCAATCCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCATTTCAGTGACATCTCCCTAATGCCACCACTCCTGGCAATCCC  986

seq1  TGCTCTGCTCCCTGATTTCATGAATTTAATAATTTTTACTTCACATAAGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGCTCCCTGATTTCATGAATTTAATAATTTTTACTTCACATAAGA  1036

seq1  AATTATGCTGCATTTGTTTTTCTTAGTCTTGCTCATTTCTAGCATATAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGCTGCATTTGTTTTTCTTAGTCTTGCTCATTTCTAGCATATAAA  1086

seq1  TGATACATGCTTTATAAATGATGGGATTTACTATTTTAAAGTCTGAAAAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACATGCTTTATAAATGATGGGATTTACTATTTTAAAGTCTGAAAAG  1136

seq1  AATTC  1150
      |||||
seq2  AATTC  1141

seq1: chr14_60432520_60433660
seq2: B6Ng01-014K13.g_67_1201

seq1  GAATTCCTAAAGGTTGCACACACCAAGGTGTCCCCAGGAATTTAAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAGGTTGCACACACCAAGGTGTCCCCAGGAATTTAAAAAAC  50

seq1  CTGGCTATGCTTTCATTTACTGAACCTTTTCCATCAACACACCGAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTATGCTTTCATTTACTGAACCTTTTCCATCAACACACCGAGAAAG  100

seq1  GTTGTAGAGAAAGGAAAGTTTCACTTGTTTTTTTTTGCTCTGCTGCCGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGAGAAAGGAAAGTTTCACTTGTTTTTTTTTGCTCTGCTGCCGTC  150

seq1  ATCATCACCATCATAATCACTACCACCACCGCTACCACCATCCTCATCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACCATCATAATCACTACCACCACCGCTACCACCATCCTCATCGC  200

seq1  CATCACCATTATCATCTCATCATCATCACCGTCATCTCCATCAACACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCATTATCATCTCATCATCATCACCGTCATCTCCATCAACACTAT  250

seq1  TATCAGCACCACCACCATCATCATCATCAACAACAACCTATCATCGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCACCACCACCATCATCATCATCAACAACAACCTATCATCGACAC  300

seq1  TCCTATGCCTTGCTGACATTGTGCTCAGCTGAACAAGGTTCTCTTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGCCTTGCTGACATTGTGCTCAGCTGAACAAGGTTCTCTTCAGAA  350

seq1  ACATATCGCACCTGTAGTGCTATCCTTCCAAACTTAAAAGGTGCAGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCGCACCTGTAGTGCTATCCTTCCAAACTTAAAAGGTGCAGATTT  400

seq1  AGCACATTCACAGTTTGTGAAATGTCTGCTAAACTAACTGGTACCACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATTCACAGTTTGTGAAATGTCTGCTAAACTAACTGGTACCACTTG  450

seq1  CCTTCACTACGGAAGATTAAAAGGCCCTAATTTCATATCCCTATGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTACGGAAGATTAAAAGGCCCTAATTTCATATCCCTATGGAAAC  500

seq1  CATGTTGCTTCTGAGCATCTGTCTGTAGACACTGTTTAATGGGTTGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGCTTCTGAGCATCTGTCTGTAGACACTGTTTAATGGGTTGAGCA  550

seq1  GAACCTTGCCATTCACTTAATACCTGCACAAACTGGAAGGCTGATGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTGCCATTCACTTAATACCTGCACAAACTGGAAGGCTGATGCCTC  600

seq1  CCATACTTCTTACCAATGCTTTCTCTGGACTCTTCTGCAGTAGCAAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTTCTTACCAATGCTTTCTCTGGACTCTTCTGCAGTAGCAAAGTA  650

seq1  TCTTTTGACCATTACAAGAGGGAGAAGAGGCTAGTTGCTAGTTTTCACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGACCATTACAAGAGGGAGAAGAGGCTAGTTGCTAGTTTTCACTC  700

seq1  AACCTAAGTGTTGTCTCTTTGGTACCCTTTCTCCTGACTATTCTATCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAGTGTTGTCTCTTTGGTACCCTTTCTCCTGACTATTCTATCCCA  750

seq1  CAGTCAGGTTCTAAGGGGCAGATGTCTTTCTTTC-TTTTGTGTACTGGGA  799
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGTCAGGTTCTAAGGGGCAGATGTCTTTCTTTCTTTTTGTGTACTGGGA  800

seq1  ACAGGACTGAGGAGAGGGATGCGAGGAAGGAGAGCTGAGAGCACACGGGT  849
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  ACAGGACTGAAGAGAGGGATGCGAGGAAGGAGAGCTGAAAGCACACGGGT  850

seq1  GTGGAAGCTAGCTATGAAGGGCATCTC-TTTTCTAAAAGGTTTAT-CTGC  897
      |||||| |||||||||||||||||||| ||||||||||||||||| ||||
seq2  GTGGAA-CTAGCTATGAAGGGCATCTCTTTTTCTAAAAGGTTTATCCTGC  899

seq1  CCAAGGCTGCTTTTTGCT-CTAGAATTGACCCATTTGAG-CCAAATGGGT  945
      |||||||||| ||||||| |||||| ||||||||||||| ||||||||||
seq2  CCAAGGCTGC-TTTTGCTCCTAGAA-TGACCCATTTGAGCCCAAATGGGT  947

seq1  GCCT-GGGGCTACCAGTTAGGACACAGGAATCATATAACTACATTAGACT  994
       ||| |||||||| ||||||||| |||| || |||| |||||| ||||||
seq2  TCCTGGGGGCTACTAGTTAGGACCCAGGGATTATAT-ACTACA-TAGACT  995

seq1  TTTTGGGAGGACATTTAACAGAACCAAATCGAAGGCAGATTGAAGGGCTT  1044
      |||| ||||||||||||||  ||||||  | |||||| |||||| |||||
seq2  TTTT-GGAGGACATTTAACGAAACCAATCCAAAGGCA-ATTGAA-GGCTT  1042

seq1  CGAGAGTCAGAAAAGTCAGTGAGATGAGCGTTGTAGAGAGATCCTAAGAG  1094
      |||||  | |||||| ||||||||||  |||||| || |||| |||||| 
seq2  CGAGAAGC-GAAAAG-CAGTGAGATGGACGTTGT-GAAAGAT-CTAAGA-  1087

seq1  AGTGTG-ATGGATGGGAACCTCAGAGGGTGGGGGAGCAGAGAAGGACC  1141
      | |||| | |||||||| |  |||||||||||||| |  | |||||||
seq2  AATGTGTAGGGATGGGACCTCCAGAGGGTGGGGGACCGAAAAAGGACC  1135