BAC Information

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BAC

Clone NameB6Ng01-014L07
Chromosome14 (Build37)
Map Location 23,388,204 - 23,585,494
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075, EG435392
Downstream geneLOC665068, Kcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014L07.bB6Ng01-014L07.g
ACCDH849171DH849172
length1,1441,048
definitionDH849171|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L07, 5' end.DH849172|Mus musculus domesticus DNA, BAC clone: B6Ng01-014L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,388,204 - 23,389,364)(23,584,430 - 23,585,494)
sequence
gaattcatcattccattctgttgttgaatgggtctgtgtacttaaattgt
tgttataaacaatgttacaaagcgaagcatggtggcacacacctgtaatc
ccaggcagaggcaggaagatgctgagttcaagctctcaggattacatggt
cttatagtaaacaaacaaacaaacaacaacaacaacaaaacccaacaaca
acaacaataaaataaggggaaaaggcagcaggcagaggaaggggctagag
cagtcagtcaggaaagtgtttgctcatctgctcttagctgggcagagaga
ctcgaacttgtgactcccaagctgaggcactaaacaagcagcctgataga
atcgggaagccgggggtgtcactgagaggctctgtcagaagaaacaagat
ggacagctcaggaaggatgacacctgagggcgacccctggtctccacaaa
tacctttacattctcacatgcaaacatgaacacacacatgtgtacaaaag
catgcatatacatcccccccacccatgcacacacatgaaacatagtaatg
ataatgctattgataatgaagatggagtgaccttttttgcaagtatgcca
tgcatgcatctttgatatttagtgtattcaatattagggctggaacaatc
acctttatgactttaaacataaattaatgtctagaaagactgttaataag
cttgttttccctctggtattgtgttggtttgttatccagaacatttcaca
aaatcttgtgcaaacggaaggaaacaacatgaatgtctagtttgatctga
ataaacatcctagtgaaaggtaaacttttctcctatgtttccatgattta
tcaaatttccatccaagttcatttttaattatattttaactaggaatttg
gcttttttgtattgagtcatcaatatactttctgtactaatgatcttagc
ccagccttattagaggggccatgggtattccccaattttcatttgctttg
aatttaaagtgtagtttgggggagggacttggaagatgctcaatgctaga
gatatggttgctctccaaggtcagcttcaatttccagccaccctcatgga
agctcaaacgtcgttatctcagttccaggaaactgacaccttct
gaattcaaagaatgcattcaatgccatttctcaaatgggaagtttgtgtg
tcgatttgaactttcattgcatcttgtactacaacaaactggtattccac
aaaagcataaaaagacaaaaaaaaaaaagataaattgatgaccatatgat
gagccatatcttggaaattccttttgtgtttgcaatcctaataaaacaaa
ttaaagcatcatattaaaaatgagcctgccttggaatcagctttctagaa
aagatggtctcagagatgcaatccaaacaaccatcaatgctataaaactc
aggatgtaccttttaaaacagtcacatttgactttttctttgaattccaa
gagacagtttataaagaactatgaagaagagttcccctaaagaaaacaaa
caaataaaacaaaaacaaaaatagatattgctatctttcacaaaatttca
tgaaaattgtgttattttttgctatgacggaaacttcattaagtgacatt
tatatagcccctctttcatatccatggtttctatgttctctgtgcgaacc
aagtacagatcaaaagtatttggaggaaaaaaaaaaacctgcatctatac
tataactatccagacttcttttataatgactgttgtaacaatcatcacta
tttgcacagcattgacattgaagtggggctcatgagtgagtaatttaaaa
gccatcttaagtacagggaatgagttacgtgggccatatgcaaacactgc
catctgatatatagaatatgagcatctaagtatttggtccatgtgagggg
agcaggaaatgctcccaataatcaccaaagaacaagtgtgcatttgctag
ataaagctgatataaaggtttaaagaaaagggaaagatggccagcccaag
tgctcagtacaaaaaggcacagacaggtcagttgtgccaagagagggcta
aagcattgttgactatgttactcaagtgactgctgatgatgcacaggtgc
atcagagacactcctggagctcaggagagcaaggacatcttatcctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23388204_23389364
seq2: B6Ng01-014L07.b_46_1189

seq1  GAATTCATCATTCCATTCTGTTGTTGAATGGGTCTGTGTACTTAAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATTCCATTCTGTTGTTGAATGGGTCTGTGTACTTAAATTGT  50

seq1  TGTTATAAACAATGTTACAAAGCGAAGCATGGTGGCACACACCTGTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAAACAATGTTACAAAGCGAAGCATGGTGGCACACACCTGTAATC  100

seq1  CCAGGCAGAGGCAGGAAGATGCTGAGTTCAAGCTCTCAGGATTACATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAGAGGCAGGAAGATGCTGAGTTCAAGCTCTCAGGATTACATGGT  150

seq1  CTTATAGTAAACAAACAAACAAACAACAACAACAACAAAACCCAACAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTAAACAAACAAACAAACAACAACAACAACAAAACCCAACAACA  200

seq1  ACAACAATAAAATAAGGGGAAAAGGCAGCAGGCAGAGGAAGGGGCTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATAAAATAAGGGGAAAAGGCAGCAGGCAGAGGAAGGGGCTAGAG  250

seq1  CAGTCAGTCAGGAAAGTGTTTGCTCATCTGCTCTTAGCTGGGCAGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGTCAGGAAAGTGTTTGCTCATCTGCTCTTAGCTGGGCAGAGAGA  300

seq1  CTCGAACTTGTGACTCCCAAGCTGAGGCACTAAACAAGCAGCCTGATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAACTTGTGACTCCCAAGCTGAGGCACTAAACAAGCAGCCTGATAGA  350

seq1  ATCGGGAAGCCGGGGGTGTCACTGAGAGGCTCTGTCAGAAGAAACAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGAAGCCGGGGGTGTCACTGAGAGGCTCTGTCAGAAGAAACAAGAT  400

seq1  GGACAGCTCAGGAAGGATGACACCTGAGGGCGACCCCTGGTCTCCACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTCAGGAAGGATGACACCTGAGGGCGACCCCTGGTCTCCACAAA  450

seq1  TACCTTTACATTCTCACATGCAAACATGAACACACACATGTGTACAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTACATTCTCACATGCAAACATGAACACACACATGTGTACAAAAG  500

seq1  CATGCATATACATCCCCCCCACCCATGCACACACATGAAACATAGTAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATATACATCCCCCCCACCCATGCACACACATGAAACATAGTAATG  550

seq1  ATAATGCTATTGATAATGAAGATGGAGTGACCTTTTTTGCAAGTATGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCTATTGATAATGAAGATGGAGTGACCTTTTTTGCAAGTATGCCA  600

seq1  TGCATGCATCTTTGATATTTAGTGTATTCAATATTAGGGCTGGAACAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCATCTTTGATATTTAGTGTATTCAATATTAGGGCTGGAACAATC  650

seq1  ACCTTTATGACTTTAAACATAAATTAATGTCTAGAAAGACTGTTAATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATGACTTTAAACATAAATTAATGTCTAGAAAGACTGTTAATAAG  700

seq1  CTTGTTTTCCCTCTGGTATTGTGTTGGTTTGTTATCCAGAACATTTCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTCCCTCTGGTATTGTGTTGGTTTGTTATCCAGAACATTTCACA  750

seq1  AAATCTTGTGCAAACGGAAGGAAACAACATGAATGTCTAGTTTGATCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGTGCAAACGGAAGGAAACAACATGAATGTCTAGTTTGATCTGA  800

seq1  ATAAACATCCTAGTG-AAGGTAAACTTTTCTCCTATGTTTCCATGATTTA  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATAAACATCCTAGTGAAAGGTAAACTTTTCTCCTATGTTTCCATGATTTA  850

seq1  TCAAATTTCCATCCAAGTTCATTTTTAATTATATTTTAACTAGGAATTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTCCATCCAAGTTCATTTTTAATTATATTTTAACTAGGAATTTG  900

seq1  GCTTTTTTGTATTGAGTCATCAATATACTTTCTGTACTAATGATCTTAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCTTTTTTGTATTGAGTCATCAATATACTTTCTGTACTAATGATCTT-AG  949

seq1  CCCAGCCTTATTAGAGGGGCCATGGGTATTCCCCAATTTTCATTTGCCTT  999
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  CCCAGCCTTATTAGAGGGGCCATGGGTATTCCCCAATTTTCATTTGC--T  997

seq1  TTGAATTTTAAAGGTGTAGTTTTGGGGGAGGGGAGCTGGAAAGATGGCTC  1049
      ||||||||  || |||||| ||||||||||||   || | ||||| ||||
seq2  TTGAATTT--AAAGTGTAG-TTTGGGGGAGGG--ACTTGGAAGAT-GCTC  1041

seq1  ATTGCTTAAGAACATGGGTTGCTCTTCCAAAGGTCTAGCTTTCAATTCCC  1099
      | ||||  || | || |||||||||  | |||||| ||| ||||||| ||
seq2  AATGCTAGAG-ATAT-GGTTGCTCT--CCAAGGTC-AGC-TTCAATTTCC  1085

seq1  AG-CACCCACATGGCAGCTCACAACTGTCTGTAACTCCAGTTCCAGGGGA  1148
      || ||||| ||||| |||||| ||| |||  || || |||||||| || |
seq2  AGCCACCCTCATGGAAGCTCA-AAC-GTCGTTATCT-CAGTTCCA-GGAA  1131

seq1  CCTGACACCTTCT  1161
       ||||||||||||
seq2  ACTGACACCTTCT  1144

seq1: chr14_23584430_23585494
seq2: B6Ng01-014L07.g_68_1115 (reverse)

seq1  CTAGGAATAAGATTGTTCTTTGCTTCTCCTGAGCTCCAGGAGTGTCCTCT  50
      ||||| |||||||   || |||| ||||||||||||||||||||| ||||
seq2  CTAGG-ATAAGAT--GTCCTTGC-TCTCCTGAGCTCCAGGAGTGT-CTCT  45

seq1  GATGCACCTGTGCATTCATTCCAGCAAGTTCACTTGAAGTAACATTAGTC  100
      |||||||||||||| ||||  |||||   ||||||| ||||||| |||||
seq2  GATGCACCTGTGCA-TCAT--CAGCA--GTCACTTG-AGTAACA-TAGTC  88

seq1  AACATGCCTTTAGGCCCTCTCTTGGCACAACTGACCTTGTCCTGTGCCTT  150
      ||||   ||||| ||||||||||||||||||||||| ||| |||||||||
seq2  AACAATGCTTTA-GCCCTCTCTTGGCACAACTGACC-TGT-CTGTGCCTT  135

seq1  TTTGTACTGGAGCACTTTGGCTGGCCATCTTTCCCTTTTCTTTAAACCCT  200
      |||||||| |||||||| |||||||||||||||||||||||||||| |||
seq2  TTTGTACT-GAGCACTTGGGCTGGCCATCTTTCCCTTTTCTTTAAA-CCT  183

seq1  TTATATCAGCTTTATCTAGCAAATGCACACTTGTTCTTTGGTGATTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCAGCTTTATCTAGCAAATGCACACTTGTTCTTTGGTGATTATTG  233

seq1  GGAGCATTTCCTGCTCCCCTCACATGGACCAAATACTTAGATGCTCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATTTCCTGCTCCCCTCACATGGACCAAATACTTAGATGCTCATAT  283

seq1  TCTATATATCAGATGGCAGTGTTTGCATATGGCCCACGTAACTCATTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATATCAGATGGCAGTGTTTGCATATGGCCCACGTAACTCATTCCC  333

seq1  TGTACTTAAGATGGCTTTTAAATTACTCACTCATGAGCCCCACTTCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTAAGATGGCTTTTAAATTACTCACTCATGAGCCCCACTTCAATG  383

seq1  TCAATGCTGTGCAAATAGTGATGATTGTTACAACAGTCATTATAAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCTGTGCAAATAGTGATGATTGTTACAACAGTCATTATAAAAGAA  433

seq1  GTCTGGATAGTTATAGTATAGATGCAGGTTTTTTTTTTTCCTCCAAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGATAGTTATAGTATAGATGCAGGTTTTTTTTTTTCCTCCAAATAC  483

seq1  TTTTGATCTGTACTTGGTTCGCACAGAGAACATAGAAACCATGGATATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATCTGTACTTGGTTCGCACAGAGAACATAGAAACCATGGATATGA  533

seq1  AAGAGGGGCTATATAAATGTCACTTAATGAAGTTTCCGTCATAGCAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGCTATATAAATGTCACTTAATGAAGTTTCCGTCATAGCAAAAA  583

seq1  ATAACACAATTTTCATGAAATTTTGTGAAAGATAGCAATATCTATTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACAATTTTCATGAAATTTTGTGAAAGATAGCAATATCTATTTTTG  633

seq1  TTTTTGTTTTATTTGTTTGTTTTCTTTAGGGGAACTCTTCTTCATAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTATTTGTTTGTTTTCTTTAGGGGAACTCTTCTTCATAGTTC  683

seq1  TTTATAAACTGTCTCTTGGAATTCAAAGAAAAAGTCAAATGTGACTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAACTGTCTCTTGGAATTCAAAGAAAAAGTCAAATGTGACTGTTT  733

seq1  TAAAAGGTACATCCTGAGTTTTATAGCATTGATGGTTGTTTGGATTGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGTACATCCTGAGTTTTATAGCATTGATGGTTGTTTGGATTGCAT  783

seq1  CTCTGAGACCATCTTTTCTAGAAAGCTGATTCCAAGGCAGGCTCATTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGACCATCTTTTCTAGAAAGCTGATTCCAAGGCAGGCTCATTTTT  833

seq1  AATATGATGCTTTAATTTGTTTTATTAGGATTGCAAACACAAAAGGAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATGCTTTAATTTGTTTTATTAGGATTGCAAACACAAAAGGAATT  883

seq1  TCCAAGATATGGCTCATCATATGGTCATCAATTTATCTTTTTTTTTTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATATGGCTCATCATATGGTCATCAATTTATCTTTTTTTTTTTTG  933

seq1  TCTTTTTATGCTTTTGTGGAATACCAGTTTGTTGTAGTACAAGATGCAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTATGCTTTTGTGGAATACCAGTTTGTTGTAGTACAAGATGCAAT  983

seq1  GAAAGTTCAAATCGACACACAAACTTCCCATTTGAGAAATGGCATTGAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTCAAATCGACACACAAACTTCCCATTTGAGAAATGGCATTGAAT  1033

seq1  GCATTCTTTGAATTC  1065
      |||||||||||||||
seq2  GCATTCTTTGAATTC  1048