BAC Information

Click to search

BAC

Clone NameB6Ng01-014N24
Chromosome14 (Build37)
Map Location 114,891,756 - 115,024,818
singlet/doubletdoublet
Overlap geneLOC100043521
Upstream geneLOC382947, LOC668791, LOC100043821
Downstream geneGpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014N24.bB6Ng01-014N24.g
ACCDH849294DH849295
length1,0771,076
definitionDH849294|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N24, 5' end.DH849295|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,891,756 - 114,892,861)(115,023,738 - 115,024,818)
sequence
gaattctttcctgctgatttatcactgaaattttaaattggaacacatgg
attgacaggtactgggccttttgtcatcaccagcaggatgagaaagttca
caagaggataggaaagttctcattaactagagacaataccgacttcagtc
tagatcagagagcggttctcaacctgtggcttgcacccttttgtgaggac
caaacaacccttcacagggtttgcctaaaactattcccacatcattatgg
ttcaaaacagtaacacaactacagttatgaaacagcaacaaaaaatactt
ttttggtttagggtcaccacaacaggaggaactgaattaaaaggtcacgg
cattaggacattgagaatcaccggtctagatcatggaatagcaggacaat
gggaaagaaagttcagtctatcagtgcagcttgtccttaggttagaaaaa
taaaggttcagtgtttttatttgatagctcttttaatcaggtcagtattt
ctttttgaaatttaatttatttattttttactagttcactttacatcccg
ctgactgcctccctccatatgatcctctcccacaatcgttccccctcccc
ctcccactccccttctcccctgagcaggtggatcatttcctgggtatccc
acccaccctggaatggtagtcagtacttttgaaaacagtttgcaaataac
tcgtgcattttattttgaaacaactttttctgtgttgggagccattaaga
caacactactgtcctgatctctgaattgggcctctctccagagaagaaaa
ggggtcaaaagcagccaccgacgcaccactccgagaataaccacagattg
ttccagccctaagtcagcactggatgtcctgacacagaagtaccctgata
ccaccaagttcctgcttcccgtgtagtcgcaaaagaaaaatttcgctgcc
catccctctgctgagagtactcctctcccccctctgctgagtactctctc
ccctcccctccctctgctgagaatgcttctatttgcttacattctgctgc
ccaatctctgctgaaagtcttcccctt
gaattcagatttgagtcccatcacccaaataacgaatgtaacttcaaaac
tgtctttaacttctgtttcagggattctgatgtcctcttctggtctttct
gggtatctgacaaacatgtggttcagagacatatatgtaggcaacatacc
catatccattaaaaaaaaaagcacaaaaccattgacagaaaattcattaa
atgtctctgagatatgcttcatatagcatggcaacggtataaataaagcc
ctgtgtgcacatgatttaagttgtggctgttgctcagttaatattagagt
gagatacagagtgagatacgagtgtaaaccaccaaagccaacatgccact
tagcagagccggagattatccaacatatgatgtccctctgccctcctctc
attggatgcctcctacttcttgcttttgctgttttctaccgttgttctgg
ctcaaaaagttttaactgcatgttgtttcaaaattcagtttttaggtaga
gatgtttatgccctagatgtctatgtctataaagatgtatattatatgta
agtatttattgctcatagctttctctttctatttcagttcacaactgctt
ttgactgacatatataatgtggaaactataggaagtaatctttcaagaat
gtctttcttccagttccttggacccctgcaaacacttctgagctcttagg
aattttttgatgctttttaaacttgccttaacattagtgaacatgaccca
tgctaaataagtctctaatattgctcaaacatttctcctttctttatggc
catttctttgtgtcttcagttgtaacaagtgaagaaagcattttaagtct
gtttgtgtagctttggttatgtcttctgagcttttcataacagtattgta
gagaaatattctacaggtggtttcatatgaacagagtacaatcaagagaa
gttatctaaacccatcagtctgttttgacttattctagtagtcacagtag
gcatgggtttgaaattccttgaaataaaagaagttttgttatatattcct
tggacaattggtcctttgatataata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114891756_114892861
seq2: B6Ng01-014N24.b_48_1124

seq1  GAATTCTTTCCTGCTGATTTATCACTGAAATTTTAAATTGGAACACATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTGCTGATTTATCACTGAAATTTTAAATTGGAACACATGG  50

seq1  ATTGACAGGTACTGGGCCTTTTGTCATCACCAGCAGGATGAGAAAGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACAGGTACTGGGCCTTTTGTCATCACCAGCAGGATGAGAAAGTTCA  100

seq1  CAAGAGGATAGGAAAGTTCTCATTAACTAGAGACAATACCGACTTCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGATAGGAAAGTTCTCATTAACTAGAGACAATACCGACTTCAGTC  150

seq1  TAGATCAGAGAGCGGTTCTCAACCTGTGGCTTGCACCCTTTTGTGAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGAGAGCGGTTCTCAACCTGTGGCTTGCACCCTTTTGTGAGGAC  200

seq1  CAAACAACCCTTCACAGGGTTTGCCTAAAACTATTCCCACATCATTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACCCTTCACAGGGTTTGCCTAAAACTATTCCCACATCATTATGG  250

seq1  TTCAAAACAGTAACACAACTACAGTTATGAAACAGCAACAAAAAATACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACAGTAACACAACTACAGTTATGAAACAGCAACAAAAAATACTT  300

seq1  TTTTGGTTTAGGGTCACCACAACAGGAGGAACTGAATTAAAAGGTCACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTAGGGTCACCACAACAGGAGGAACTGAATTAAAAGGTCACGG  350

seq1  CATTAGGACATTGAGAATCACCGGTCTAGATCATGGAATAGCAGGACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGACATTGAGAATCACCGGTCTAGATCATGGAATAGCAGGACAAT  400

seq1  GGGAAAGAAAGTTCAGTCTATCAGTGCAGCTTGTCCTTAGGTTAGAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGAAAGTTCAGTCTATCAGTGCAGCTTGTCCTTAGGTTAGAAAAA  450

seq1  TAAAGGTTCAGTGTTTTTATTTGATAGCTCTTTTAATCAGGTCAGTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTTCAGTGTTTTTATTTGATAGCTCTTTTAATCAGGTCAGTATTT  500

seq1  CTTTTTGAAATTTAATTTATTTATTTTTTACTAGTTCACTTTACATCCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGAAATTTAATTTATTTATTTTTTACTAGTTCACTTTACATCCCG  550

seq1  CTGACTGCCTCCCTCCATATGATCCTCTCCCACAATCGTTCCCCCTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGCCTCCCTCCATATGATCCTCTCCCACAATCGTTCCCCCTCCCC  600

seq1  CTCCCACTCCCCTTCTCCCCTGAGCAGGTGGATCATTTCCTGGGTATCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACTCCCCTTCTCCCCTGAGCAGGTGGATCATTTCCTGGGTATCCC  650

seq1  ACCCACCCTGGAATGGTAGTCAGTACTTTTGAAAACAGTTTGCAAATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCTGGAATGGTAGTCAGTACTTTTGAAAACAGTTTGCAAATAAC  700

seq1  TCGTGCATTTTATTTTGAAACAACTTTTTCTGTGTTGGGAGCCATTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCATTTTATTTTGAAACAACTTTTTCTGTGTTGGGAGCCATTAAGA  750

seq1  CAACACTACTGTCCTGATCTCTGAATTGGGCCTCTCTCCAGAGAAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTACTGTCCTGATCTCTGAATTGGGCCTCTCTCCAGAGAAGAAAA  800

seq1  GGGGGTCAAAAGCAGGCCACCGACGCACCACTCCGAGAATAACCACAGAT  850
       ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  -GGGGTCAAAAGCA-GCCACCGACGCACCACTCCGAGAATAACCACAGAT  848

seq1  TGTTCCAGCCCTAAGTCAGCACTGGATGTCCTGACCACAAGAAGTACCCT  900
      |||||||||||||||||||||||||||||||||| ||| |||||||||||
seq2  TGTTCCAGCCCTAAGTCAGCACTGGATGTCCTGA-CAC-AGAAGTACCCT  896

seq1  GATACCACCAAGTTCCTGCTTCCCGTGTAGTCGCCAAAAGAAAAATTTCC  950
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  GATACCACCAAGTTCCTGCTTCCCGTGTAGTCG-CAAAAGAAAAATTT-C  944

seq1  GCTGCCCCATCCCTCCTGCTGAGAAGTACTTCCTCTTCCCCCCCTCCTGC  1000
      |||| ||||||||| |||||||| ||||| ||||||  ||||||| ||||
seq2  GCTG-CCCATCCCT-CTGCTGAG-AGTAC-TCCTCT--CCCCCCT-CTGC  987

seq1  TGAGTACTTCCTCTTCCCCCTCCCCTCCCTCCTGCTGAGAAGTGCTTCCT  1050
      ||||||||  ||||  |||||||||||||| |||||||||| ||||||  
seq2  TGAGTACT--CTCT--CCCCTCCCCTCCCT-CTGCTGAGAA-TGCTTC--  1029

seq1  TATTTGCTTGTACATTTCTGCTGCCCCATTCCTCCTGCTGAGAAGTACTT  1100
      ||||||||  |||| ||||||||||| ||  || ||||||| |||| |||
seq2  TATTTGCT--TACA-TTCTGCTGCCCAAT--CT-CTGCTGA-AAGT-CTT  1071

seq1  CCCCTT  1106
      ||||||
seq2  CCCCTT  1077

seq1: chr14_115023738_115024818
seq2: B6Ng01-014N24.g_68_1143 (reverse)

seq1  TATTATATCAAAGAACCAATTGGTCCCAAGGAAATATAT-ACATAACTCT  49
      ||||||||||||| ||||||||   |||||| ||||||| ||| ||||  
seq2  TATTATATCAAAGGACCAATTG--TCCAAGG-AATATATAACAAAACTTC  47

seq1  ATTAATCTCACAGGAAATTCAAA-CCATGGCTACTGTGACTACTAGAATA  98
       || || ||| ||||| |||||| ||||| ||||||||||||||||||||
seq2  TTTTATTTCA-AGGAATTTCAAACCCATGCCTACTGTGACTACTAGAATA  96

seq1  AGTC-AAACAGACTGATGGGTTTAGATAACTTCTTCCTGATTTGTACTCT  147
      |||| |||||||||||||||||||||||||||| || ||| |||||||||
seq2  AGTCAAAACAGACTGATGGGTTTAGATAACTTC-TCTTGA-TTGTACTCT  144

seq1  GTTCATATGAAACCACCTGTAGAATATATCTCTACAATACTGTTAATGAA  197
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  GTTCATATGAAACCACCTGTAGAATATTTCTCTACAATACTGTT-ATGAA  193

seq1  AAGGCTCAGAAGACATAACCAAAGCTACACAAACAGACTTAAAATGCTTT  247
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-GCTCAGAAGACATAACCAAAGCTACACAAACAGACTTAAAATGCTTT  242

seq1  CTTCACTTGTTACAACTGAAGACACAAAGAAATGGCCATAAAGAAAGGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTTGTTACAACTGAAGACACAAAGAAATGGCCATAAAGAAAGGAG  292

seq1  AAATGTTTGAGCAATATTAGAGACTTATTTAGCATGGGTCATGTTCACTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTGAGCAATATTAGAGACTTATTTAGCATGGGTCATGTTCACTA  342

seq1  ATGTTAAGGCAAGTTTAAAAAGCATCAAAAAATTCCTAAGAGCTCAGAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGGCAAGTTTAAAAAGCATCAAAAAATTCCTAAGAGCTCAGAAG  392

seq1  TGTTTGCAGGGGTCCAAGGAACTGGAAGAAAGACATTCTTGAAAGATTAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCAGGGGTCCAAGGAACTGGAAGAAAGACATTCTTGAAAGATTAC  442

seq1  TTCCTATAGTTTCCACATTATATATGTCAGTCAAAAGCAGTTGTGAACTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATAGTTTCCACATTATATATGTCAGTCAAAAGCAGTTGTGAACTG  492

seq1  AAATAGAAAGAGAAAGCTATGAGCAATAAATACTTACATATAATATACAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAAGAGAAAGCTATGAGCAATAAATACTTACATATAATATACAT  542

seq1  CTTTATAGACATAGACATCTAGGGCATAAACATCTCTACCTAAAAACTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAGACATAGACATCTAGGGCATAAACATCTCTACCTAAAAACTGA  592

seq1  ATTTTGAAACAACATGCAGTTAAAACTTTTTGAGCCAGAACAACGGTAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAACAACATGCAGTTAAAACTTTTTGAGCCAGAACAACGGTAGA  642

seq1  AAACAGCAAAAGCAAGAAGTAGGAGGCATCCAATGAGAGGAGGGCAGAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCAAAAGCAAGAAGTAGGAGGCATCCAATGAGAGGAGGGCAGAGG  692

seq1  GACATCATATGTTGGATAATCTCCGGCTCTGCTAAGTGGCATGTTGGCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCATATGTTGGATAATCTCCGGCTCTGCTAAGTGGCATGTTGGCTT  742

seq1  TGGTGGTTTACACTCGTATCTCACTCTGTATCTCACTCTAATATTAACTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTTTACACTCGTATCTCACTCTGTATCTCACTCTAATATTAACTG  792

seq1  AGCAACAGCCACAACTTAAATCATGTGCACACAGGGCTTTATTTATACCG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGCCACAACTTAAATCATGTGCACACAGGGCTTTATTTATACCG  842

seq1  TTGCCATGCTATATGAAGCATATCTCAGAGACATTTAATGAATTTTCTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATGCTATATGAAGCATATCTCAGAGACATTTAATGAATTTTCTGT  892

seq1  CAATGGTTTTGTGCTTTTTTTTTTAATGGATATGGGTATGTTGCCTACAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTTTTGTGCTTTTTTTTTTAATGGATATGGGTATGTTGCCTACAT  942

seq1  ATATGTCTCTGAACCACATGTTTGTCAGATACCCAGAAAGACCAGAAGAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCTCTGAACCACATGTTTGTCAGATACCCAGAAAGACCAGAAGAG  992

seq1  GACATCAGAATCCCTGAAACAGAAGTTAAAGACAGTTTTGAAGTTACATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAGAATCCCTGAAACAGAAGTTAAAGACAGTTTTGAAGTTACATT  1042

seq1  CGTTATTTGGGTGATGGGACTCAAATCTGAATTC  1081
      ||||||||||||||||||||||||||||||||||
seq2  CGTTATTTGGGTGATGGGACTCAAATCTGAATTC  1076