BAC Information

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BAC

Clone NameB6Ng01-015A12
Chromosome14 (Build37)
Map Location 36,664,229 - 36,665,339
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277
Downstream geneLOC665933, 4930474N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015A12.bB6Ng01-015A12.g
ACCDH849407DH849408
length1,2111,108
definitionDH849407|Mus musculus domesticus DNA, BAC clone: B6Ng01-015A12, 5' end.DH849408|Mus musculus domesticus DNA, BAC clone: B6Ng01-015A12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattgtttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattggcggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaattttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataagtatggattgattcg
cattcttctacacgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtctggcatggtgattccgccagaagttctt
ttatccttgagaagactttttgctatcctaggttttttgttattccagac
aaatttgcaaattgctccttccaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttccttaatttctttcttcagagatttgaagtttttatcat
acagatctttcacttccttagttagagtcacgccaagatatttttatatt
atttgtgactattgagacggtgtgtttccctaatttctttctcagctgtt
atctttgtatagaggaacgccatgacttgttgagttattttatatccagc
tactcacccgaagctggtttatcagttaggaagttctctgggagagttta
gtcacttatattgccatcattctctggcaaaaggattgactcccttttcc
agttgatccctgatcttgtgtgacaatcgctggggcgatagaactccaag
accgctcgatg
gaattcagctttgagctattcacagcacagtatgagagggtacagagagc
aattacagacacaagcaggagaaatccagcccatttctcaaaggctaatc
tccactggaaaagaaaatatttcttaaaatgaggattaaatcccagacag
ggagataagaagtaaagaaaaacaaaaaatcattgttattcaactaggca
tccctaatatttttaaatgagagatatggtttgaattttaggtatcatag
gaaacaaaataatattaaaagattcagcccttattgcaacagcaggaaca
ttcctatattcaatctcagaaaatagaaaaatagaagctggggagatttt
taggttggataaagtgttttcagttcaatcttacagacctgcactgcaca
ccaaacatgcagcagtgaggacgtagaaatgtggattccacagtctcact
gaccagccagtgtcagtaaagtagacaaatctaggttcaacagagatcct
gtctgagggaaaaaatgaggtggagaacaatagaggaagacttctaacag
caacctctactttccacatgagcccacatgaatgagcacactcttataca
catgtgcacaggagtgtacaacacacaaacgcagagtaaaaagaataata
tgtcaacaaatatataaatatgaaaaaaggaaaagaacacactcgttgag
aattagataggaatctcatgtggtttgcaaggatattaatatctgaggga
aggttagcagtaggacacagtttgaacaaaggtgtgagatgagaagaaca
gaggtgcattcagggattggtaactcgccaggaacagtgcatagcacagt
acacttgggaggaaaatgaagcacaatttacatgaaaatgtcgactggtg
ccaaattgagacagacgatttagaaaagagacacagggagacaccgtgtt
aaatgtttaataacttatgtgtgaatggggatggctgctcagtcaagatg
tgctgtgatcccaacattgccagggaatgcgaatataatgaacaaaactg
aagtacaagtggtcctggaagtagaggtttagcaaaaggccaacatcagg
agaagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36664229_36665339
seq2: B6Ng01-015A12.g_68_1175 (reverse)

seq1  TTTC-TCTCCTTGATGTTTGCCTTTTGGCTAAACTTCTACTTCCAGGACC  49
      |||| ||||| ||||||| ||||||| ||||||| |||||||||||||||
seq2  TTTCTTCTCC-TGATGTTGGCCTTTT-GCTAAACCTCTACTTCCAGGACC  48

seq1  AC-TGTACTTCAGTCTGTTCCATTATATTCGCATTTCCTGGCAATGTTGG  98
      || ||||||||||| |  | ||||||||||||||| ||||||||||||||
seq2  ACTTGTACTTCAGTTTTGTTCATTATATTCGCATTCCCTGGCAATGTTGG  98

seq1  GATCACAGCACATCTTGGACTGAGCAAGCCATCCCCATTCACACATAAGT  148
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  GATCACAGCACATCTT-GACTGAGC-AGCCATCCCCATTCACACATAAGT  146

seq1  TATTAAACATTTAACACGGTGTCTCCCTGTGTCTCTTTTTCTAAATCGTC  198
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATTAAACATTTAACACGGTGTCTCCCTGTGTCTC-TTTTCTAAATCGTC  195

seq1  TGTCTCAATTTGGCACCAGTCGACATTTTCATGTAAATTGTGCTTCATTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAATTTGGCACCAGTCGACATTTTCATGTAAATTGTGCTTCATTT  245

seq1  TCCTCCCAAGTGTACTGTGCTATGCACTGTTCCTGGCGAGTTACCAATCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCAAGTGTACTGTGCTATGCACTGTTCCTGGCGAGTTACCAATCC  295

seq1  CTGAATGCACCTCTGTTCTTCTCATCTCACACCTTTGTTCAAACTGTGTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGCACCTCTGTTCTTCTCATCTCACACCTTTGTTCAAACTGTGTC  345

seq1  CTACTGCTAACCTTCCCTCAGATATTAATATCCTTGCAAACCACATGAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCTAACCTTCCCTCAGATATTAATATCCTTGCAAACCACATGAGA  395

seq1  TTCCTATCTAATTCTCAACGAGTGTGTTCTTTTCCTTTTTTCATATTTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATCTAATTCTCAACGAGTGTGTTCTTTTCCTTTTTTCATATTTAT  445

seq1  ATATTTGTTGACATATTATTCTTTTTACTCTGCGTTTGTGTGTTGTACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTTGACATATTATTCTTTTTACTCTGCGTTTGTGTGTTGTACAC  495

seq1  TCCTGTGCACATGTGTATAAGAGTGTGCTCATTCATGTGGGCTCATGTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCACATGTGTATAAGAGTGTGCTCATTCATGTGGGCTCATGTGG  545

seq1  AAAGTAGAGGTTGCTGTTAGAAGTCTTCCTCTATTGTTCTCCACCTCATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAGGTTGCTGTTAGAAGTCTTCCTCTATTGTTCTCCACCTCATT  595

seq1  TTTTCCCTCAGACAGGATCTCTGTTGAACCTAGATTTGTCTACTTTACTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTCAGACAGGATCTCTGTTGAACCTAGATTTGTCTACTTTACTG  645

seq1  ACACTGGCTGGTCAGTGAGACTGTGGAATCCACATTTCTACGTCCTCACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCTGGTCAGTGAGACTGTGGAATCCACATTTCTACGTCCTCACT  695

seq1  GCTGCATGTTTGGTGTGCAGTGCAGGTCTGTAAGATTGAACTGAAAACAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATGTTTGGTGTGCAGTGCAGGTCTGTAAGATTGAACTGAAAACAC  745

seq1  TTTATCCAACCTAAAAATCTCCCCAGCTTCTATTTTTCTATTTTCTGAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCAACCTAAAAATCTCCCCAGCTTCTATTTTTCTATTTTCTGAGA  795

seq1  TTGAATATAGGAATGTTCCTGCTGTTGCAATAAGGGCTGAATCTTTTAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATAGGAATGTTCCTGCTGTTGCAATAAGGGCTGAATCTTTTAAT  845

seq1  ATTATTTTGTTTCCTATGATACCTAAAATTCAAACCATATCTCTCATTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTGTTTCCTATGATACCTAAAATTCAAACCATATCTCTCATTTA  895

seq1  AAAATATTAGGGATGCCTAGTTGAATAACAATGATTTTTTGTTTTTCTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTAGGGATGCCTAGTTGAATAACAATGATTTTTTGTTTTTCTTT  945

seq1  ACTTCTTATCTCCCTGTCTGGGATTTAATCCTCATTTTAAGAAATATTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTATCTCCCTGTCTGGGATTTAATCCTCATTTTAAGAAATATTTT  995

seq1  CTTTTCCAGTGGAGATTAGCCTTTGAGAAATGGGCTGGATTTCTCCTGCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAGTGGAGATTAGCCTTTGAGAAATGGGCTGGATTTCTCCTGCT  1045

seq1  TGTGTCTGTAATTGCTCTCTGTACCCTCTCATACTGTGCTGTGAATAGCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGTAATTGCTCTCTGTACCCTCTCATACTGTGCTGTGAATAGCT  1095

seq1  CAAAGCTGAATTC  1111
      |||||||||||||
seq2  CAAAGCTGAATTC  1108