BAC Information

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BAC

Clone NameB6Ng01-015L09
Chromosome14 (Build37)
Map Location 35,777,436 - 35,778,528
singlet/doubletsinglet
Overlap geneGrid1
Upstream geneZfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a, 9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik, Wapal, LOC100041341
Downstream gene4930596D02Rik, LOC100040277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015L09.bB6Ng01-015L09.g
ACCDH849895DH849896
length1,1041,218
definitionDH849895|Mus musculus domesticus DNA, BAC clone: B6Ng01-015L09, 5' end.DH849896|Mus musculus domesticus DNA, BAC clone: B6Ng01-015L09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatctcaccagtctttgtgtgaatgtgaagttgggggatgtgc
tgaatcactctgtcttgggtggcctatgggcatccacaccacacccttct
ctgagatttggaagagctggccctgtgggagagcacttgacatgcagaga
ggacacagcccagcacacagaaggtgtgcatcagctctttgctcttgctg
cccaatccattgtgtcagtagtgaaagttggcctcagcaaggtctagtga
cttctctgaggtcacagaatcagcatgcagaacagatctcctgacaccaa
aggtcatactttctttacagtagccttcacagatctgtgttctctgaggc
tttgttcctggaaaagtcaaagactgagaggcatttggagttgctctggg
atgcccatcaagcctgtgtctcctgcttgtgcctgtaaaactaacccaca
caaataggcgggtctattgggaggttggtctccatgcttcagtttacttc
cctctaaataagtcagttagacctgttgctctctatggcttcatgaactt
ctttgttctgtgtttgtgggtggctcatttcataccctgagaatgccact
cagagatggggtaattgttggtcatagggatgggacgagacacttattga
gcaattgatacataccagcattgagcttagtgtttgtaagtgaatctcat
taaattgtcctaatagtccttaagtaattcttttggccccagtttctaga
tggggaagctgagatcagatagctacattattgaactacacttaaggata
cctgacatgaaggcaaagctgctgcttatgtagcttcaatgcattatcat
ttagaaaagcagaaagttctcaaatcagtttcccttgtcaccccccaaga
aggctaggaaaattagataaaaatgaaattcaaaataagaaagaaccggg
atggggaaacaattaaacagaacagagaataagcattcaaaaaaaatgat
acccaagctgttgttttgtgatgaataaattgaataattcttctagacca
gtgattagatgaatataaacttatccacccacttcaccccccatgtcaac
agca
gaattcctaaacctggtaaacagcttcagtgcagtagctggatataaaat
taactcaaacaaagcactggcctttctctacacaaaggataaacaggatg
agaaagaaattagggaaacaacacccttcacaatagtcacaaataatata
aaataccttgatgtgactctaaggaagtaaaaggtctgtatgacaagaac
ttcaagtctctgaagaaagaaattgaagatctcagaagatggaaagatct
cccatgctcatagattggcaggattaatatagtaaaaatagctatcctgc
cgaaagcaatctacagattcaatgcaatccccgtcaaaattccaactcaa
ttcttcactgagatagaaagggcaatttgcaaattcatctggaataacaa
aaaacctaggtagcaaaaactattctcaaaaaataaaagaacctctgggg
aaatcaccatgcctgacctcaagctgtactacagagcaattgtgataaaa
actgcatggtactggtacagcgacagacaggtatatcaatggaatagaat
tgaagacccagaaatgaacccacacacctatggtcacttgatctttaaca
aaggagctaaaaccatccagtggaaaaaagacagcattttcaacaaatgg
tgctggctcaactggcatttatcatgtagaagaatgtgaattgatccatt
cttatctccttgtccaaagatcaagtctaagtggatcaaggaactccaca
taataccagagacactgaaatttatagaggagaaagtgggggaaagccta
gaagatttgggcacaggggggaaattcctaaacagaacagcaatgccttg
tgctgaaagattgagaatcgacaatgggacctcataaaattgcaaagctt
ctgtaaggcaaaggacactgtcattagacataaggccaccacagatttgg
aaagaatttttaccaatcctaaatctgatggggggactatttccatatat
acaagaactcagaaactgactcggaaatcaataccccattaaaatggggt
acgagctaacaaggatttctcactgaggtatacgatgccctgaaggccac
ctgtatagaatacggtactcaatatatgtccttatcatcaggtaatgcat
ccaacactgatatcacttcactcatcaatggctagataaaatatacaggt
acaacgcgatgtgctcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35777436_35778528
seq2: B6Ng01-015L09.b_44_1147

seq1  GAATTCAAATCTCACCAGTCTTTGTGTGAATGTGAAGTTGGGGGATGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCTCACCAGTCTTTGTGTGAATGTGAAGTTGGGGGATGTGC  50

seq1  TGAATCACTCTGTCTTGGGTGGCCTATGGGCATCCACACCACACCCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACTCTGTCTTGGGTGGCCTATGGGCATCCACACCACACCCTTCT  100

seq1  CTGAGATTTGGAAGAGCTGGCCCTGTGGGAGAGCACTTGACATGCAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTTGGAAGAGCTGGCCCTGTGGGAGAGCACTTGACATGCAGAGA  150

seq1  GGACACAGCCCAGCACACAGAAGGTGTGCATCAGCTCTTTGCTCTTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGCCCAGCACACAGAAGGTGTGCATCAGCTCTTTGCTCTTGCTG  200

seq1  CCCAATCCATTGTGTCAGTAGTGAAAGTTGGCCTCAGCAAGGTCTAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATCCATTGTGTCAGTAGTGAAAGTTGGCCTCAGCAAGGTCTAGTGA  250

seq1  CTTCTCTGAGGTCACAGAATCAGCATGCAGAACAGATCTCCTGACACCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGAGGTCACAGAATCAGCATGCAGAACAGATCTCCTGACACCAA  300

seq1  AGGTCATACTTTCTTTACAGTAGCCTTCACAGATCTGTGTTCTCTGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATACTTTCTTTACAGTAGCCTTCACAGATCTGTGTTCTCTGAGGC  350

seq1  TTTGTTCCTGGAAAAGTCAAAGACTGAGAGGCATTTGGAGTTGCTCTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCTGGAAAAGTCAAAGACTGAGAGGCATTTGGAGTTGCTCTGGG  400

seq1  ATGCCCATCAAGCCTGTGTCTCCTGCTTGTGCCTGTAAAACTAACCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCATCAAGCCTGTGTCTCCTGCTTGTGCCTGTAAAACTAACCCACA  450

seq1  CAAATAGGCGGGTCTATTGGGAGGTTGGTCTCCATGCTTCAGTTTACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGGCGGGTCTATTGGGAGGTTGGTCTCCATGCTTCAGTTTACTTC  500

seq1  CCTCTAAATAAGTCAGTTAGACCTGTTGCTCTCTATGGCTTCATGAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAATAAGTCAGTTAGACCTGTTGCTCTCTATGGCTTCATGAACTT  550

seq1  CTTTGTTCTGTGTTTGTGGGTGGCTCATTTCATACCCTGAGAATGCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTCTGTGTTTGTGGGTGGCTCATTTCATACCCTGAGAATGCCACT  600

seq1  CAGAGATGGGGTAATTGTTGGTCATAGGGATGGGACGAGACACTTATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGGGGTAATTGTTGGTCATAGGGATGGGACGAGACACTTATTGA  650

seq1  GCAATTGATACATACCAGCATTGAGCTTAGTGTTTGTAAGTGAATCTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTGATACATACCAGCATTGAGCTTAGTGTTTGTAAGTGAATCTCAT  700

seq1  TAAATTGTCCTAATAGTCCTTAAGTAATTCTTTTGGCCCCAGTTTCTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTCCTAATAGTCCTTAAGTAATTCTTTTGGCCCCAGTTTCTAGA  750

seq1  TGGGGAAGCTGAGATCAGATAGCTACATTATTGAACTACAC-TAAGGATA  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGGGAAGCTGAGATCAGATAGCTACATTATTGAACTACACTTAAGGATA  800

seq1  CCTGACATGAAGGCAAAGCTGCTGCTTATGTAGCTTCAATGCATTATCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATGAAGGCAAAGCTGCTGCTTATGTAGCTTCAATGCATTATCAT  850

seq1  TTAGAAAAGCAGAAAGTTCTCAAATCAG-TTCCCTTGTCACCCACCCAAG  898
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  TTAGAAAAGCAGAAAGTTCTCAAATCAGTTTCCCTTGTCACCC-CCCAAG  899

seq1  AA-GCTA-GAAAAATAGAT-AAAATGAAATCCAAAATAAGAAAGAA-CGG  944
      || |||| ||||| ||||| |||||||||| ||||||||||||||| |||
seq2  AAGGCTAGGAAAATTAGATAAAAATGAAATTCAAAATAAGAAAGAACCGG  949

seq1  GAT-GGGAAACAATAAAACAGAACAGAGAA-AAGCAATACAAAAAAATGA  992
      ||| |||||||||| ||||||||||||||| ||||| |  ||||||||||
seq2  GATGGGGAAACAATTAAACAGAACAGAGAATAAGCATTCAAAAAAAATGA  999

seq1  AACCCAAAGCTGTTG-TTTGTGATGATAGAATTG-ATAATTC-TCTAGAC  1039
       |||| ||||||||| ||||||||||   ||||| ||||||| |||||||
seq2  TACCC-AAGCTGTTGTTTTGTGATGAATAAATTGAATAATTCTTCTAGAC  1048

seq1  CAATGAATTAGAAGAA-ATAAAACTATCCACCCAC-TCACCCACCA-GTC  1086
      || || |||||| ||| |||||  ||||||||||| |||||| ||| |||
seq2  CAGTG-ATTAGATGAATATAAACTTATCCACCCACTTCACCCCCCATGTC  1097

seq1  AACAGCA  1093
      |||||||
seq2  AACAGCA  1104