BAC Information

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BAC

Clone NameB6Ng01-016M11
Chromosome14 (Build37)
Map Location 82,320,024 - 82,502,429
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016M11.bB6Ng01-016M11.g
ACCDH850644DH850645
length1,1121,088
definitionDH850644|Mus musculus domesticus DNA, BAC clone: B6Ng01-016M11, 5' end.DH850645|Mus musculus domesticus DNA, BAC clone: B6Ng01-016M11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,501,332 - 82,502,429)(82,320,024 - 82,321,116)
sequence
gaattcacacttttaaaatttagaagtttaaaaaagagaaaaattcatac
aataacagtaaaattgtaaataaattttaataaatgtatgtacaccatac
aaacacacacacacacaaacacatacatgcacacccattcacacacaaaa
aagtgatggaaagcaggagacttaataaatagcttcaatatggatttgag
attttattgaaaagtggagaatgaagtcaatcacagactgtttaggtgtt
ctggaagtgaaagaaaaaatgaaactgagtttaaatacttgtacaacaca
caaccactgtgatgattcaagttctcaaagtcagaaaaaaaccatctaga
ctccagtccctgagtcattgtgctggctgccctccaaatacaagccctaa
aagagaagaaatcaaaaaacaaaaacaaaaacaaaataaaaaacagactt
tatttagattttggctttcatagagagaaagagggatgacgaagagaggt
caaagagaaaggaaaagtaaaaagagaccaaagacagacacacgtgcaca
cacacacacacacacacacacacacacacacagagagagagagagagaga
gagagacagagagacagagagacagagagagagacagagacagagacaga
ttaaatttatacacaaccaataaaataatgtcaatagtcctcagaagtgt
aagaaagatggggatttttaacttccagatgtgggagggatttcttgtgg
cactcctatgaaaaatgagaaagataacctcagcctccctatccatatct
cctcttgtctttttttttttttttttttttttttttgggtaaaataaaag
accccagtctaaactaagctgtacatattgacctatggggaaaaaataca
tgcatcccatttttattgtcctacaaacttagatgaaccttttaatcaga
aggatgggtttattcctactggggaaaatcactcctccctctccttaaaa
aaaggttttttggttttttgttttccgtttgttgtagggttggttaccgg
tatttgtttgccactttctgatattctccaaagatttaaattcccggttc
agtcattctttg
gaattccaggctatttatctcaaaaggaatactaataaagggttgcgtga
aagatagttctgagtgttacatttgttaacataatgagatgatatttaca
gtacaatgtattagaatgttgccttctgctcctgagtttacaaaatggaa
atcacttaaaaataatgacggtaagtgataattttaataaggactaattc
aatttattacattctccttaattttttctatgatatatatgtttccagtt
aagagcatgtagtgttttatagtctacacatcaagaaaattaaaatagag
ttttttgtctaggcttatgaacggtacaatattgttcaatttattaagaa
aagccttttatatctttcatgattttatatagacattgatgggcaaaaat
ttgagctaaatattatagaagtaaattaatcctcaaatgttagacataat
gatcaaatacaaaaattacatattaatttcccatgaacaaataataaaat
agaacagggttataaagaaaaggaacagattttgtagagcaatagaaaaa
atatcaccattctcacattcattaaaaaactcttatgctactcttcataa
tcaatgaaataattttgaaggatagaatcttctaccaacaagagtctttt
tgttccatgtacagaaaggaatagtctcatcagagcaccaatataactcc
tacacggttgttacacattgaccctggaatagccaacacattcttgggtt
ttgagtactttgaacctggcttgtaatattgttttcagagaacatggaac
ctatggtgtatggagactaatgggaacataaagttcactgagagtgatca
ctcatgatgctcggtttacaacctcccactttgcttcctctctgtgtctt
caatatgggccggctttttcatactcagaactctcatgtcttctcatcac
gatggactattctctctgagagcatgagtcaaaataaattttcttcctaa
gttgttctgacagcagtccattactataagagaaagtaatagaacttcag
ccctgattcctttctcagtttgttggtataatgcctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82501332_82502429
seq2: B6Ng01-016M11.b_44_1155 (reverse)

seq1  CAAAGAATGACATGAACAGGGAATTAAATACTT--GAGAATA-CAGAAAG  47
      ||||||||||| ||||| ||||||| ||  |||  ||||||| |||||||
seq2  CAAAGAATGAC-TGAACCGGGAATTTAAATCTTTGGAGAATATCAGAAAG  49

seq1  TGCAAAACAAAAAACAGAAAACAAACCAACAAACAAACAGAAAACAAAAA  97
      ||  ||||||| | | | || ||| || || ||||||| |||||||||||
seq2  TGGCAAACAAATACCGGTAACCAACCCTAC-AACAAACGGAAAACAAAAA  98

seq1  ACAAAAAAACC-TTTTCTAAGGAGAGTGA-GAGTGA-TTTCCACAGTA-G  143
      || |||||||| |||| ||||||||| || |||||| ||||| ||||| |
seq2  ACCAAAAAACCTTTTTTTAAGGAGAGGGAGGAGTGATTTTCCCCAGTAGG  148

seq1  AATAAA-CCATCCTTCTGATT-AAAGGTTCATCTAAGTTTGTA-GACAAT  190
      |||||| |||||||||||||| ||||||||||||||||||||| ||||||
seq2  AATAAACCCATCCTTCTGATTAAAAGGTTCATCTAAGTTTGTAGGACAAT  198

seq1  -AAAATGAGATGCATGTATTCTT--CCCATAGGTCAATATGTACAGCTTA  237
       |||||| |||||||||||| ||  |||||||||||||||||||||||||
seq2  AAAAATGGGATGCATGTATTTTTTCCCCATAGGTCAATATGTACAGCTTA  248

seq1  GTTTAGACTGGGTCC--TTATCTTAACC-AAAAAAAAAAAAAAAAAAAAA  284
      ||||||||||||  |  |||| ||| || |||||||||||||||||||||
seq2  GTTTAGACTGGGGTCTTTTATTTTACCCAAAAAAAAAAAAAAAAAAAAAA  298

seq1  AAAAAGACAAGAGGAGATATGGATAGGGAGGCTGAGGTTATCTTTCTCAT  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACAAGAGGAGATATGGATAGGGAGGCTGAGGTTATCTTTCTCAT  348

seq1  TTTTCATAGGAGTGCCACAAGAAATCCCTCCCACATCTGGAAGTTAAAAA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAGGAGTGCCACAAGAAATCCCTCCCACATCTGGAAGTTAAAAA  398

seq1  TCCCCATCTTTCTTACACTTCTGAGGACTATTGACATTATTTTATTGGTT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCTTTCTTACACTTCTGAGGACTATTGACATTATTTTATTGGTT  448

seq1  GTGTATAAATTTAATCTGTCTCTGTCTCTGTCTCTCTCTCTGTCTCTCTG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAAATTTAATCTGTCTCTGTCTCTGTCTCTCTCTCTGTCTCTCTG  498

seq1  TCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTG  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTG  548

seq1  TGTGTGTGTGTGTGTGTGCACGTGTGTCTGTCTTTGGTCTCTTTTTACTT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGCACGTGTGTCTGTCTTTGGTCTCTTTTTACTT  598

seq1  TTCCTTTCTCTTTGACCTCTCTTCGTCATCCCTCTTTCTCTCTATGAAAG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTCTTTGACCTCTCTTCGTCATCCCTCTTTCTCTCTATGAAAG  648

seq1  CCAAAATCTAAATAAAGTCTGTTTTTTATTTTGTTTTTGTTTTTGTTTTT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATCTAAATAAAGTCTGTTTTTTATTTTGTTTTTGTTTTTGTTTTT  698

seq1  TGATTTCTTCTCTTTTAGGGCTTGTATTTGGAGGGCAGCCAGCACAATGA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTTCTCTTTTAGGGCTTGTATTTGGAGGGCAGCCAGCACAATGA  748

seq1  CTCAGGGACTGGAGTCTAGATGGTTTTTTTCTGACTTTGAGAACTTGAAT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGACTGGAGTCTAGATGGTTTTTTTCTGACTTTGAGAACTTGAAT  798

seq1  CATCACAGTGGTTGTGTGTTGTACAAGTATTTAAACTCAGTTTCATTTTT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGTGGTTGTGTGTTGTACAAGTATTTAAACTCAGTTTCATTTTT  848

seq1  TCTTTCACTTCCAGAACACCTAAACAGTCTGTGATTGACTTCATTCTCCA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCACTTCCAGAACACCTAAACAGTCTGTGATTGACTTCATTCTCCA  898

seq1  CTTTTCAATAAAATCTCAAATCCATATTGAAGCTATTTATTAAGTCTCCT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAATAAAATCTCAAATCCATATTGAAGCTATTTATTAAGTCTCCT  948

seq1  GCTTTCCATCACTTTTTTGTGTGTGAATGGGTGTGCATGTATGTGTTTGT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCATCACTTTTTTGTGTGTGAATGGGTGTGCATGTATGTGTTTGT  998

seq1  GTGTGTGTGTGTTTGTATGGTGTACATACATTTATTAAAATTTATTTACA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTTTGTATGGTGTACATACATTTATTAAAATTTATTTACA  1048

seq1  ATTTTACTGTTATTGTATGAATTTTTCTCTTTTTTAAACTTCTAAATTTT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTGTTATTGTATGAATTTTTCTCTTTTTTAAACTTCTAAATTTT  1098

seq1  AAAAGTGTGAATTC  1098
      ||||||||||||||
seq2  AAAAGTGTGAATTC  1112

seq1: chr14_82320024_82321116
seq2: B6Ng01-016M11.g_65_1152

seq1  GAATTCCAGGCTATTTATCTCAAAAGGAATACTAATAAAGGGTTGCGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTATTTATCTCAAAAGGAATACTAATAAAGGGTTGCGTGA  50

seq1  AAGATAGTTCTGAGTGTTACATTTGTTAACATAATGAGATGATATTTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGTTCTGAGTGTTACATTTGTTAACATAATGAGATGATATTTACA  100

seq1  GTACAATGTATTAGAATGTTGCCTTCTGCTCCTGAGTTTACAAAATGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATGTATTAGAATGTTGCCTTCTGCTCCTGAGTTTACAAAATGGAA  150

seq1  ATCACTTAAAAATAATGACGGTAAGTGATAATTTTAATAAGGACTAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTAAAAATAATGACGGTAAGTGATAATTTTAATAAGGACTAATTC  200

seq1  AATTTATTACATTCTCCTTAATTTTTTCTATGATATATATGTTTCCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTACATTCTCCTTAATTTTTTCTATGATATATATGTTTCCAGTT  250

seq1  AAGAGCATGTAGTGTTTTATAGTCTACACATCAAGAAAATTAAAATAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATGTAGTGTTTTATAGTCTACACATCAAGAAAATTAAAATAGAG  300

seq1  TTTTTTGTCTAGGCTTATGAACGGTACAATATTGTTCAATTTATTAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTCTAGGCTTATGAACGGTACAATATTGTTCAATTTATTAAGAA  350

seq1  AAGCCTTTTATATCTTTCATGATTTTATATAGACATTGATGGGCAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTTATATCTTTCATGATTTTATATAGACATTGATGGGCAAAAAT  400

seq1  TTGAGCTAAATATTATAGAAGTAAATTAATCCTCAAATGTTAGACATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTAAATATTATAGAAGTAAATTAATCCTCAAATGTTAGACATAAT  450

seq1  GATCAAATACAAAAATTACATATTAATTTCCCATGAACAAATAATAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAATACAAAAATTACATATTAATTTCCCATGAACAAATAATAAAAT  500

seq1  AGAACAGGGTTATAAAGAAAAGGAACAGATTTTGTAGAGCAATAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGGGTTATAAAGAAAAGGAACAGATTTTGTAGAGCAATAGAAAAA  550

seq1  ATATCACCATTCTCACATTCATTAAAAAACTCTTATGCTACTCTTCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACCATTCTCACATTCATTAAAAAACTCTTATGCTACTCTTCATAA  600

seq1  TCAATGAAATAATTTTGAAGGATAGAATCTTCTACCAACAAGAGTCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAAATAATTTTGAAGGATAGAATCTTCTACCAACAAGAGTCTTTT  650

seq1  TGTTCCATGTACAGAAAGGAATAGTCTCATCAGAGCACCAATATAACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCATGTACAGAAAGGAATAGTCTCATCAGAGCACCAATATAACTCC  700

seq1  TACACGGTTGTTACACATTGACCCTGGAATAGCCAACACATTCTTGGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGGTTGTTACACATTGACCCTGGAATAGCCAACACATTCTTGGGTT  750

seq1  TTGAGTACTTTGAACCTGGCTTGTAATATTGTTTTCAGAGAACATGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTACTTTGAACCTGGCTTGTAATATTGTTTTCAGAGAACATGGAAC  800

seq1  CTATGGTGTATGGAGACTAATGGGAACATAAAGTTCACTGAGAGTGATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTGTATGGAGACTAATGGGAACATAAAGTTCACTGAGAGTGATCA  850

seq1  CTCATGATGCTCGGTTTACAACCTCCCACTTTGCTTCCTCTCTGTGTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGATGCTCGGTTTACAACCTCCCACTTTGCTTCCTCTCTGTGTCTT  900

seq1  CAATAT-GGCCGGCTTTTTCATACTCAGAACTCTCATGTCTTCTCATCAC  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGGGCCGGCTTTTTCATACTCAGAACTCTCATGTCTTCTCATCAC  950

seq1  GATGGACTATTCTCTCTGAGAGCATGAGTCAAAATTAAAATTTTCTTCCT  999
      |||||||||||||||||||||||||||||||||||  |||||||||||| 
seq2  GATGGACTATTCTCTCTGAGAGCATGAGTCAAAAT--AAATTTTCTTCC-  997

seq1  TAAGTTGTTCTGACAGCAGGTCCATTACTATAAAGAGAAAAGTAAATAAG  1049
      |||||||||||||||||| |||||||||||| ||||| ||||| ||||  
seq2  TAAGTTGTTCTGACAGCA-GTCCATTACTAT-AAGAG-AAAGT-AATAGA  1043

seq1  ACTTCAGGCCTGATTGCTTTCTCAGTTTGTT-GTATAATGGCTCA  1093
      ||||||| ||||||| ||||||||||||||| |||||||| ||||
seq2  ACTTCAGCCCTGATTCCTTTCTCAGTTTGTTGGTATAATGCCTCA  1088