BAC Information

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BAC

Clone NameB6Ng01-017L19
Chromosome14 (Build37)
Map Location 63,531,798 - 63,643,406
singlet/doubletdoublet
Overlap geneWdfy2, LOC668268, EG432867, EG654465, EG654458
Upstream geneDleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263
Downstream gene2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk, LOC668293, BC065085, Tdh, Mtmr9, Xkr6, LOC668306, 2610028A01Rik, Sox7, 4930578I06Rik, Rp1l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017L19.bB6Ng01-017L19.g
ACCDH851334DH851335
length1,042816
definitionDH851334|Mus musculus domesticus DNA, BAC clone: B6Ng01-017L19, 5' end.DH851335|Mus musculus domesticus DNA, BAC clone: B6Ng01-017L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,531,798 - 63,532,848)(63,642,597 - 63,643,406)
sequence
gaattcactgtgtaggctggcctcaaatatgtggtgatcctcctcgagtt
ctggggttacacagatgctcccccaccatgtctggtaggctagtttgctt
ttgtgggtactgcttttggctagtaagacttgggttttgtaattttggct
ttgttgttccttatatgtacatatttatttcttaattagtgttctggact
taaagagccatggacttaaagccagaaaaaagatttacagcgaggtttga
atggataccttagctagaaatagcttgaggtacagcatagggagtttcct
actggcccaggaagggaacattgcttagtcttgaggtttgggtcaaaagg
agtttactgttctatttcagcattgacgaggaaaagtgaaaccatactaa
taagcttagtctttgtaagttatttgtgtgtgtctttaaaatgcacccat
ttttatgtcattggactatggaaagcgttgaagttgtattttttacttca
aagtctgttattgatgagcaagttgtttattcttccctggtgggtgactt
aaatagtaaatgagttagtatctctcacagaaaaacattaacttcatttt
tgtatagcatattatgttactatcttatattcttcaaaaatctattaata
taagccgggtgtggtggcacacacctttaatcccagcactcgggaggcag
aggtaggcgggtttctgagttcaaggccagcctggtctacaaagtgagtt
ccaggacagtcagagctatacagagaaaccctgtctcgaaaaacaaaaca
aaacaaaacaaaaacaaaaaaatctattaaccttaatagagggctgctct
ttctaagttacagagcactcacaaaatcagttttgccttcagactctgga
actccaggacatccaacacttaagcgagtacagatactcctgagtgggaa
cagcatctagctgagtgcttagtggagcatcatgacatcataaacggttt
cactttccacaggaagtgttttaatgttcaggataattttct
gaattctgtactcacaccttgaaagcttgcttactttcagaacgtctatc
attagatttctggccattttcgatgcttcgttatagtaagcattggccgg
ctgctttggtgtctgtgctctgggttgtaaagatcatttgaaaaagaaat
tacaaaatactgaagtacaaaagatagaacctttaaatgttgaactaagc
agccccaaactaagtaatgatcatctcaaaggtgggaattttccttaaac
aaagagtaaaatgctgcatagtaccccaaaatatttccactagcttttta
tttaaaatgaacatttgagagatgttactctctaaagtagcttggtcctc
tttcaagtaacacctgggatttcccccccagtaaatttcaataacaactt
tgcatagataagatgaagtagggtgttggctcgtgtcacccaaatctgtg
aaaataacttgatcatttacgtcctatgtcttatgatcattattgtgtca
tagagaacagtactgggtctattattttcaaaacaagtggattcttaaac
agcgacttaaatggttttttccacacagctcatggctaggtgcaaaccat
tctttgtatttgatggatagtttgcaaaaaattcttaccagcaagagtca
tgcgcatttagtttggggccccagaaacctgaaaagcagcgaaaaaaatg
gggtttgaagagtatgggtctagaatggctttgtcaaactatgaggggaa
gatttatgtgttttggcttgggattaccaacccatttatgattttaaaat
atacttataataaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_63531798_63532848
seq2: B6Ng01-017L19.b_48_1089

seq1  GAATTCACTGTGTAGGCTGGCCTCAAATATGTGGTGATCCTCCTCGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGTAGGCTGGCCTCAAATATGTGGTGATCCTCCTCGAGTT  50

seq1  CTGGGGTTACACAGATGCTCCCCCACCATGTCTGGTAGGCTAGTTTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTTACACAGATGCTCCCCCACCATGTCTGGTAGGCTAGTTTGCTT  100

seq1  TTGTGGGTACTGCTTTTGGCTAGTAAGACTTGGGTTTTGTAATTTTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGTACTGCTTTTGGCTAGTAAGACTTGGGTTTTGTAATTTTGGCT  150

seq1  TTGTTGTTCCTTATATGTACATATTTATTTCTTAATTAGTGTTCTGGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTCCTTATATGTACATATTTATTTCTTAATTAGTGTTCTGGACT  200

seq1  TAAAGAGCCATGGACTTAAAGCCAGAAAAAAGATTTACAGCGAGGTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCCATGGACTTAAAGCCAGAAAAAAGATTTACAGCGAGGTTTGA  250

seq1  ATGGATACCTTAGCTAGAAATAGCTTGAGGTACAGCATAGGGAGTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATACCTTAGCTAGAAATAGCTTGAGGTACAGCATAGGGAGTTTCCT  300

seq1  ACTGGCCCAGGAAGGGAACATTGCTTAGTCTTGAGGTTTGGGTCAAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCCAGGAAGGGAACATTGCTTAGTCTTGAGGTTTGGGTCAAAAGG  350

seq1  AGTTTACTGTTCTATTTCAGCATTGACGAGGAAAAGTGAAACCATACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTACTGTTCTATTTCAGCATTGACGAGGAAAAGTGAAACCATACTAA  400

seq1  TAAGCTTAGTCTTTGTAAGTTATTTGTGTGTGTCTTTAAAATGCACCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTAGTCTTTGTAAGTTATTTGTGTGTGTCTTTAAAATGCACCCAT  450

seq1  TTTTATGTCATTGGACTATGGAAAGCGTTGAAGTTGTATTTTTTACTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTCATTGGACTATGGAAAGCGTTGAAGTTGTATTTTTTACTTCA  500

seq1  AAGTCTGTTATTGATGAGCAAGTTGTTTATTCTTCCCTGGTGGGTGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGTTATTGATGAGCAAGTTGTTTATTCTTCCCTGGTGGGTGACTT  550

seq1  AAATAGTAAATGAGTTAGTATCTCTCACAGAAAAACATTAACTTCATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTAAATGAGTTAGTATCTCTCACAGAAAAACATTAACTTCATTTT  600

seq1  TGTATAGCATATTATGTTACTATCTTATATTCTTCAAAAATCTATTAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCATATTATGTTACTATCTTATATTCTTCAAAAATCTATTAATA  650

seq1  TAAGCCGGGTGTGGTGGCACACACCTTTAATCCCAGCACTCGGGAGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCGGGTGTGGTGGCACACACCTTTAATCCCAGCACTCGGGAGGCAG  700

seq1  AGGTAGGCGGGTTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGTGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGCGGGTTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGTGAGTT  750

seq1  CCAGGACAGTCAGAGCTATACAGAGAAACCCTGTCTCGAAAAACAAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGTCAGAGCTATACAGAGAAACCCTGTCTCGAAAAACAAAACA  800

seq1  AAACAAAACAAAAAACAAAAAAATCTATTAACCTTAATAGAGGGCTGCTC  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAC-AAAAACAAAAAAATCTATTAACCTTAATAGAGGGCTGCTC  849

seq1  TTTCTAAGTTAACAGAGCACTCACAAAATCAGGTTTTGCCCTCAGACTCT  900
      |||||||||| |||||||||||||||||||| |||||||| |||||||||
seq2  TTTCTAAGTT-ACAGAGCACTCACAAAATCA-GTTTTGCCTTCAGACTCT  897

seq1  GGAACTCCAGGACATCCAACACTTAAGCGGAGTACAGATACTCCTGAGTG  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGAACTCCAGGACATCCAACACTTAAGC-GAGTACAGATACTCCTGAGTG  946

seq1  GGAACAGCAGTCTAGCTGAGTGCTTAGTGTAGCAATCATGACATCATAAA  1000
      ||||||||| ||||||||||||||||||| ||| ||||||||||||||||
seq2  GGAACAGCA-TCTAGCTGAGTGCTTAGTGGAGC-ATCATGACATCATAAA  994

seq1  CCGTTTCCACTTCCACAGGGAAGGTGTTTTATATGTTCAGGATAATTTTC  1050
      | |||||   |||||||||  | |||||||| ||||||||||||||||||
seq2  CGGTTTCACTTTCCACAGG--AAGTGTTTTA-ATGTTCAGGATAATTTTC  1041

seq1  T  1051
      |
seq2  T  1042

seq1: chr14_63642597_63643406
seq2: B6Ng01-017L19.g_69_884 (reverse)

seq1  TTTTTATTATAAGTATATTTTAAAATCATAAATGGGTTGGTAATCCCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTATAAGTATATTTTAAAATCATAAATGGGTTGGTAATCCCAAG  50

seq1  CCAAAACACAT-AATCTTCCCCTCATAGTCTGAC-AAGCCATTCTAGA-C  97
      ||||||||||| ||||||||||||||||| |||| ||||||||||||| |
seq2  CCAAAACACATAAATCTTCCCCTCATAGTTTGACAAAGCCATTCTAGACC  100

seq1  CATACTCTTCAAACCCCATTTTCTTCGCTGCTTTTCAGGTTTCTGGGGCC  147
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATACTCTTCAAACCCCATTTTTTTCGCTGCTTTTCAGGTTTCTGGGGCC  150

seq1  CCAAACTAAATGCGCATGACTCTTGCTGGTAAGAATTTTTTGCAAACTAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTAAATGCGCATGACTCTTGCTGGTAAGAATTTTTTGCAAACTAT  200

seq1  CCATCAAATACAAAGAATGGTTTGCACCTAGCCATGAGCTGTGTGG-AAA  246
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCATCAAATACAAAGAATGGTTTGCACCTAGCCATGAGCTGTGTGGAAAA  250

seq1  AACCA-TTAAGTCGCTG-TTAAGAATCCACTTGTTTTGAAAATAATAGAC  294
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  AACCATTTAAGTCGCTGTTTAAGAATCCACTTGTTTTGAAAATAATAGAC  300

seq1  CCAGTACTGTTCTCTATGACACAATAATGATCATAAGACATAGGACGTAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACTGTTCTCTATGACACAATAATGATCATAAGACATAGGACGTAA  350

seq1  ATGATCAAGTTATTTTCACAGATTTGGGTGACACGAGCCAACACCCTACT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAAGTTATTTTCACAGATTTGGGTGACACGAGCCAACACCCTACT  400

seq1  TCATCTTATCTATGCAAAGTTGTTATTGAAATTTACTGGGGGGGAAATCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTATCTATGCAAAGTTGTTATTGAAATTTACTGGGGGGGAAATCC  450

seq1  CAGGTGTTACTTGAAAGAGGACCAAGCTACTTTAGAGAGTAACATCTCTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTACTTGAAAGAGGACCAAGCTACTTTAGAGAGTAACATCTCTC  500

seq1  AAATGTTCATTTTAAATAAAAAGCTAGTGGAAATATTTTGGGGTACTATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCATTTTAAATAAAAAGCTAGTGGAAATATTTTGGGGTACTATG  550

seq1  CAGCATTTTACTCTTTGTTTAAGGAAAATTCCCACCTTTGAGATGATCAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTTACTCTTTGTTTAAGGAAAATTCCCACCTTTGAGATGATCAT  600

seq1  TACTTAGTTTGGGGCTGCTTAGTTCAACATTTAAAGGTTCTATCTTTTGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGTTTGGGGCTGCTTAGTTCAACATTTAAAGGTTCTATCTTTTGT  650

seq1  ACTTCAGTATTTTGTAATTTCTTTTTCAAATGATCTTTACAACCCAGAGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGTATTTTGTAATTTCTTTTTCAAATGATCTTTACAACCCAGAGC  700

seq1  ACAGACACCAAAGCAGCCGGCCAATGCTTACTATAACGAAGCATCGAAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACCAAAGCAGCCGGCCAATGCTTACTATAACGAAGCATCGAAAA  750

seq1  TGGCCAGAAATCTAATGATAGACGTTCTGAAAGTAAGCAAGCTTTCAAGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGAAATCTAATGATAGACGTTCTGAAAGTAAGCAAGCTTTCAAGG  800

seq1  TGTGAGTACAGAATTC  810
      ||||||||||||||||
seq2  TGTGAGTACAGAATTC  816