BAC Information

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BAC

Clone NameB6Ng01-017M24
Chromosome14 (Build37)
Map Location 25,386,077 - 25,387,209
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnma1, LOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24
Downstream geneLOC669315, LOC100039411, Zmiz1, I920194n01, LOC100039007
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017M24.bB6Ng01-017M24.g
ACCDH851385DH851386
length9221,002
definitionDH851385|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M24, 5' end.DH851386|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaattgtgtgtttatcattcccttatgtttttatacagtgttt
taacatacaaatgaagagcaaaattggaattgctacatgtgggcttttct
gtagatttgcttatatcggtcaatattatttctaatatgtttcagacatg
tattttggaaggccaaggctgattcatttttactgttctttgacaaatgt
catgaatgtatataatatattttgatcattttctgtcccctttgccctgt
ctcacccccctcactccagctaaactctttctcctcactaagtcttcctc
ttatctacatgtttattgtgtcattttgtctgggacccctggtttaacta
gggttgcctgcatgagtattcttttattttcagttgctaagcattctctt
ttctgactcatgtaattcactcgttgacaggtatgtgaatgagtggtggt
gggctgggtggcatcctgagcatgctggaatctcatttgtacatctctca
gtggtgcccatgcaccatacacaaggggctctggggttaccacataaagc
aatggtatttctgggtctgtggatattcaaatgcttgatttctcaagata
aagccttttgtgtttccatattctctcttaaaatgtgtaactacctgttg
tgtccggccagcagatcacaggtttgggttttagcctggaaaggcatttt
ggaaacctggaagagaagaagggctgggctgcgcgagataaggaaggaac
caagacaaagatctctgctcaaggttcaatttttactattttggcactcc
gttatgaaaggaagggggagggcccaattcccgcccaataatcttggggt
ctagtagcaggtgcccacatgtacgattccgaacagcaaagttggcaggt
tcaagcagtgggcgtagcagaa

gaattctcacctgaggaaacacaaagggctcagaaacacctaaagaaatg
tttaacatccttagtcatcagggaaatgcaaaacaaaaatgaccctgaga
ttccacctcacaccagtcagaatggccaaagggtaatggagaaagagaaa
cactcctccattgctggtgggatggcaagctggtacagccactctggaaa
tcagtttggcagttcctcagaaaattggacatagtactacctgaggaccc
agctacaccactcctggacatatacccagaagatgctccaacatatgtaa
taaggatacaatctcctctatgttcatagcagccatatttataatagcca
gaagctggaagcaacccagatgtctctcaacagaggagtggatacagaaa
atgtacatttacacatggaatactactcagccattaaaaacattgacttc
atgaagttcttagttaaatagatagaacttgagaatatcatcctgagtga
ggtgactcagtcacaaagagacaaacaagatatgtactcactgataaata
gatattagcccaaagttcagaatacccaagattcaattaaaaaaccatat
gaagcctaagaagaaggaagaccaaaatgtagatgcttcagtgattttta
gaagggtgaacaaaatactcaagggtaaatatggagacaaaatatggagc
agagactgaaggaaaggtcatgcagagactgccccacctggggatccttc
ccatacacaggcatcaaacctggacattattgtggatgctgggaagtgct
tgctgacaggagcctgatgtggctgtctcctgagaggctctgccagagcc
tgacaaatatagaggaggaagcttgcagtcaaccactggactgagtttga
gagtccctgatggagagttggagaggactgaagagctgaggggtttgcac
cccatggagaaacacaatgtcacagccaaatcattgcagttctgggactg
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25386077_25387209
seq2: B6Ng01-017M24.b_48_969 (reverse)

seq1  TTCTGCTTAGATATTGTTACTTGTCTTTATGGTCATGTGACCAATATAAG  50
                                                        
seq2  --------------------------------------------------  0

seq1  CCACACAATGGGGCCACAAGCACGGGCAGGGAGTCATGATTTACATTGCT  100
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTTTGAGACATGAAAATAGGAAGTAATATACAGGTAGTTGTAGCCTC  150
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTCCCCCAGCCTTAATGGTTCCACTGTTTACACCTGGATGGAGCTTGC  200
                                                        
seq2  --------------------------------------------------  0

seq1  CAGCTCAATCGTTCTGCCACGCCCACTGCTGGAACCTGCC-ACTTTGCTG  249
                 |||||| |||||||||||| ||||||||| |||||||||
seq2  -----------TTCTGCTACGCCCACTGCTTGAACCTGCCAACTTTGCTG  39

seq1  TTCGGAATCGTACATGTGGGCACCCTGCTACTAGACCCCAAGATTATTTG  299
      |||||||||||||||||||||| ||||||||||||||||||||||||| |
seq2  TTCGGAATCGTACATGTGGGCA-CCTGCTACTAGACCCCAAGATTATTGG  88

seq1  GCGGGAATTGGGCCCCTCCCCCTTCC-TTCATAACGGAGTGCCAAAATAG  348
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  GCGGGAATTGGG-CCCTCCCCCTTCCTTTCATAACGGAGTGCCAAAATAG  137

seq1  TAAAAATTGAACCTTGAGCAGAGATCTTTGTCTTGGTTCCTTCCTTATCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTGAACCTTGAGCAGAGATCTTTGTCTTGGTTCCTTCCTTATCT  187

seq1  CGCGCAGCCCAGCCCTTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCAGCCCAGCCCTTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCAG  237

seq1  GCTAAAACCCAAACCTGTGATCTGCTGGCCGGACACAACAGGTAGTTACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAACCCAAACCTGTGATCTGCTGGCCGGACACAACAGGTAGTTACA  287

seq1  CATTTTAAGAGAGAATATGGAAACACAAAAGGCTTTATCTTGAGAAATCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAGAGAGAATATGGAAACACAAAAGGCTTTATCTTGAGAAATCA  337

seq1  AGCATTTGAATATCCACAGACCCAGAAATACCATTGCTTTATGTGGTAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGAATATCCACAGACCCAGAAATACCATTGCTTTATGTGGTAAC  387

seq1  CCCAGAGCCCCTTGTGTATGGTGCATGGGCACCACTGAGAGATGTACAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGCCCCTTGTGTATGGTGCATGGGCACCACTGAGAGATGTACAAA  437

seq1  TGAGATTCCAGCATGCTCAGGATGCCACCCAGCCCACCACCACTCATTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCCAGCATGCTCAGGATGCCACCCAGCCCACCACCACTCATTCA  487

seq1  CATACCTGTCAACGAGTGAATTACATGAGTCAGAAAAGAGAATGCTTAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTGTCAACGAGTGAATTACATGAGTCAGAAAAGAGAATGCTTAGC  537

seq1  AACTGAAAATAAAAGAATACTCATGCAGGCAACCCTAGTTAAACCAGGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAATAAAAGAATACTCATGCAGGCAACCCTAGTTAAACCAGGGG  587

seq1  TCCCAGACAAAATGACACAATAAACATGTAGATAAGAGGAAGACTTAGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGACAAAATGACACAATAAACATGTAGATAAGAGGAAGACTTAGTG  637

seq1  AGGAGAAAGAGTTTAGCTGGAGTGAGGGGGGTGAGACAGGGCAAAGGGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAGAGTTTAGCTGGAGTGAGGGGGGTGAGACAGGGCAAAGGGGA  687

seq1  CAGAAAATGATCAAAATATATTATATACATTCATGACATTTGTCAAAGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGATCAAAATATATTATATACATTCATGACATTTGTCAAAGAA  737

seq1  CAGTAAAAATGAATCAGCCTTGGCCTTCCAAAATACATGTCTGAAACATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAAATGAATCAGCCTTGGCCTTCCAAAATACATGTCTGAAACATA  787

seq1  TTAGAAATAATATTGACCGATATAAGCAAATCTACAGAAAAGCCCACATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATAATATTGACCGATATAAGCAAATCTACAGAAAAGCCCACATG  837

seq1  TAGCAATTCCAATTTTGCTCTTCATTTGTATGTTAAAACACTGTATAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATTCCAATTTTGCTCTTCATTTGTATGTTAAAACACTGTATAAAA  887

seq1  ACATAAGGGAATGATAAACACACAATTTAGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  ACATAAGGGAATGATAAACACACAATTTAGAATTC  922


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