BAC Information

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BAC

Clone NameB6Ng01-018A08
Chromosome14 (Build37)
Map Location 71,949,832 - 72,069,960
singlet/doubletdoublet
Overlap geneLOC100043136
Upstream geneHr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132
Downstream geneLOC668477, LOC668482, LOC675957, Fndc3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018A08.bB6Ng01-018A08.g
ACCDH851534DH851535
length1,190698
definitionDH851534|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A08, 5' end.DH851535|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,949,832 - 71,951,033)(72,069,263 - 72,069,960)
sequence
gaattctgttcatcccagcaccctgataaacacagagtgtgctttctctg
ggttaaatgaatgtggaacacactaaacacaatgcatggcaccttccttc
actgttggtttttaactggagcttaggtttatacaagatgagacaggagg
tataaaactctccacagagctcctgtccctgctcacacacagcctcccca
tcatgaacaccactcaccatagcttgacattcattgcacctgatcaacca
tggtgacatcactatcatccaaagttcatggattaacttagagtttatgc
tttttcttctatgagctagaaaatatgtgtattgacatgtacccactcct
atgtcccatggagtattatagtatattatcagacaggtgttttttcactg
ccctaggaaaccaacatttctcccatttatataactcctgatttttcttt
ctccctgtctctatcctactctccctccctacctgattccctcttttttt
ccccattattttctgttgtcaaagttctttctcttttaaagaatggcaaa
atacgtaataaaaatattttaaaaaagaaaataaaaatagaaaatgcaat
atatatttacaataaaaattttcagccatagaaaacagggatatggatac
aattggaggtgtgaataaaatgtttcaaaaacaaaaaacaaacaaacaac
aacaacaaaaaagaatggcatagttagaattatatagtatgtagcctttt
agattgatgccttctactgtataacatgtacttaaagcttctcccatggc
cttttgtggcttgacagcatatatttttaacaccaaattcatggtttatc
aattcaatcaaagacaccgtggttgagtccatgttttggcatctagaaat
aatgctgtaatcaatatcaacatccatgtgcatattttgtgtggatatat
gcatttaactgcttggggtagaagatgcatgcttgttgatatttagtaaa
ggtagatttcattttataggacttttgtttttcaaagtggcttgtgttgg
atagttttggctttatcatgacacttttacaagattgtgctaagtggtta
agaaagcagctgagcagcgtgagaaaaacatccaggagtgtagttaccca
cggtccctgccttcattgaggcctgcatcttgcttcttcc
gaattcaagggggactggggcgaaccacattttcacagggaacaaggtgg
tctgtaaaaggctcaagccctaagtatttaatgaaggttgggaaacactg
taatgaagagactgaagagtggtcttggccatagctcagccattactcaa
tggtgcacccacaggccagttgtctggcatttctgtgtctttactgcctt
gactagaagtaaagaggtaatatatagatggcaatgtgctaattaggcat
attagttacttttcttgcttttgcgacaagctaactaaatcaattgaagt
gtttattttcgctcacagtttcagggtacagtctgtcttagtggcttctg
gtcactttgtgcactcggccaggaagcagagcaagaagaatgctggttct
tggatcattttctcctctatacaaaggctgaggcctgggctcaaaacggt
accaactacatttaggtaggtcttctcccacgactttactcaatcaagag
actctcacagagacatgctcaaaggttttctttcaaggtgattctcaatc
cagtcagttaataatgacaatcacctgggaaaccatgaatcgttgtgtgt
aggtgggggtgacctaaggattctgtgtagattgtatataggggcacatg
catatgcacagtaagtgagatcctaagagggatgttttagcagaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_71949832_71951033
seq2: B6Ng01-018A08.b_44_1233

seq1  GAATTCTGTTCATCCCAGCACCCTGATAAACACAGAGTGTGCTTTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCATCCCAGCACCCTGATAAACACAGAGTGTGCTTTCTCTG  50

seq1  GGTTAAATGAATGTGGAACACACTAAACACAATGCATGGCACCTTCCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAATGAATGTGGAACACACTAAACACAATGCATGGCACCTTCCTTC  100

seq1  ACTGTTGGTTTTTAACTGGAGCTTAGGTTTATACAAGATGAGACAGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGGTTTTTAACTGGAGCTTAGGTTTATACAAGATGAGACAGGAGG  150

seq1  TATAAAACTCTCCACAGAGCTCCTGTCCCTGCTCACACACAGCCTCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACTCTCCACAGAGCTCCTGTCCCTGCTCACACACAGCCTCCCCA  200

seq1  TCATGAACACCACTCACCATAGCTTGACATTCATTGCACCTGATCAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAACACCACTCACCATAGCTTGACATTCATTGCACCTGATCAACCA  250

seq1  TGGTGACATCACTATCATCCAAAGTTCATGGATTAACTTAGAGTTTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACATCACTATCATCCAAAGTTCATGGATTAACTTAGAGTTTATGC  300

seq1  TTTTTCTTCTATGAGCTAGAAAATATGTGTATTGACATGTACCCACTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCTATGAGCTAGAAAATATGTGTATTGACATGTACCCACTCCT  350

seq1  ATGTCCCATGGAGTATTATAGTATATTATCAGACAGGTGTTTTTTCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCATGGAGTATTATAGTATATTATCAGACAGGTGTTTTTTCACTG  400

seq1  CCCTAGGAAACCAACATTTCTCCCATTTATATAACTCCTGATTTTTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGAAACCAACATTTCTCCCATTTATATAACTCCTGATTTTTCTTT  450

seq1  CTCCCTGTCTCTATCCTACTCTCCCTCCCTACCTGATTCCCTCTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGTCTCTATCCTACTCTCCCTCCCTACCTGATTCCCTCTTTTTTT  500

seq1  CCCCATTATTTTCTGTTGTCAAAGTTCTTTCTCTTTTAAAGAATGGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTATTTTCTGTTGTCAAAGTTCTTTCTCTTTTAAAGAATGGCAAA  550

seq1  ATACGTAATAAAAATATTTTAAAAAAGAAAATAAAAATAGAAAATGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTAATAAAAATATTTTAAAAAAGAAAATAAAAATAGAAAATGCAAT  600

seq1  ATATATTTACAATAAAAATTTTCAGCCATAGAAAACAGGGATATGGATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTACAATAAAAATTTTCAGCCATAGAAAACAGGGATATGGATAC  650

seq1  AATTGGAGGTGTGAATAAAATGTTTCAAAAACAAAAAACAAACAAACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAGGTGTGAATAAAATGTTTCAAAAACAAAAAACAAACAAACAAC  700

seq1  AACAACAAAAAAGAATGGCATAGTTAGAATTATATAGTATGTAGCCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAAAAAGAATGGCATAGTTAGAATTATATAGTATGTAGCCTTTT  750

seq1  AGATTGATGCCTTCTACTGTATAACATGTACTTAAAGCTTCTCCCATGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGATGCCTTCTACTGTATAACATGTACTTAAAGCTTCTCCCATGGC  800

seq1  CTTTTGTGGCTTGACAGCATATATTTTTAACACCAAATTCATGGTTTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGGCTTGACAGCATATATTTTTAACACCAAATTCATGGTTTATC  850

seq1  AATTCAATCAAAGACACCGTGGTTGAGTCCATGTTTTGGCATCTAGAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATCAAAGACACCGTGGTTGAGTCCATGTTTTGGCATCTAGAAAT  900

seq1  AATGCTGTAATCAATATCAACATCCATGTGCATATTTTGTGTGGATATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTAATCAATATCAACATCCATGTGCATATTTTGTGTGGATATAT  950

seq1  GCATTTAACTGCTTGGGGTAGAAGATGCATGCTTGTTGATAATTTAGTAA  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCATTTAACTGCTTGGGGTAGAAGATGCATGCTTGTTGAT-ATTTAGTAA  999

seq1  AGGTAGATTTCATTTTATAAGGACTTTTGTTTTTCAAAGTGGC-TGTGTT  1049
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  AGGTAGATTTCATTTTAT-AGGACTTTTGTTTTTCAAAGTGGCTTGTGTT  1048

seq1  GGATAGTTTTTGGCTATAATCATGACACTTTTAACAAGATTGTGCTAGGG  1099
      |||||| |||||||| | |||||||||||||| ||||||||||||||  |
seq2  GGATAG-TTTTGGCT-TTATCATGACACTTTT-ACAAGATTGTGCTA-AG  1094

seq1  TGTATAGGAAAGCAAGCTGAGCCAGC-TGAGAAAACATTCCAGGAAGTGA  1148
      ||  || |||||| ||||||| |||| ||||||||   |||||| |||| 
seq2  TGGTTAAGAAAGC-AGCTGAG-CAGCGTGAGAAAAACATCCAGG-AGTGT  1141

seq1  TGTTACCCAACGGTCCCTGCTTCCATTGAGGCTTGCACATCCTTGCCTTC  1198
       ||||||| ||||||||||| | ||||||||| ||||    |||| ||||
seq2  AGTTACCC-ACGGTCCCTGCCTTCATTGAGGCCTGCA---TCTTG-CTTC  1186

seq1  TTCC  1202
      ||||
seq2  TTCC  1190

seq1: chr14_72069263_72069960
seq2: B6Ng01-018A08.g_68_765 (reverse)

seq1  TTCCTCTGCTAATACATCCCTCTTAGGATCTCACTTACTGTGCATATGCA  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGCTAAAACATCCCTCTTAGGATCTCACTTACTGTGCATATGCA  50

seq1  TGTGCCCCTATATACAATCTACACAGAATCCTTAGGTCACCCCCACCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCCTATATACAATCTACACAGAATCCTTAGGTCACCCCCACCTAC  100

seq1  ACACAACGATTCATGGTTTCCCAGGTGATTGTCATTATTAACTGACTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACGATTCATGGTTTCCCAGGTGATTGTCATTATTAACTGACTGGA  150

seq1  TTGAGAATCACCTTGAAAGAAAACCTTTGAGCATGTCTCTGTGAGAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATCACCTTGAAAGAAAACCTTTGAGCATGTCTCTGTGAGAGTCT  200

seq1  CTTGATTGAGTAAAGTCGTGGGAGAAGACCTACCTAAATGTAGTTGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTGAGTAAAGTCGTGGGAGAAGACCTACCTAAATGTAGTTGGTAC  250

seq1  CGTTTTGAGCCCAGGCCTCAGCCTTTGTATAGAGGAGAAAATGATCCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTGAGCCCAGGCCTCAGCCTTTGTATAGAGGAGAAAATGATCCAAG  300

seq1  AACCAGCATTCTTCTTGCTCTGCTTCCTGGCCGAGTGCACAAAGTGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCATTCTTCTTGCTCTGCTTCCTGGCCGAGTGCACAAAGTGACCA  350

seq1  GAAGCCACTAAGACAGACTGTACCCTGAAACTGTGAGCGAAAATAAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACTAAGACAGACTGTACCCTGAAACTGTGAGCGAAAATAAACAC  400

seq1  TTCAATTGATTTAGTTAGCTTGTCGCAAAAGCAAGAAAAGTAACTAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTGATTTAGTTAGCTTGTCGCAAAAGCAAGAAAAGTAACTAATAT  450

seq1  GCCTAATTAGCACATTGCCATCTATATATTACCTCTTTACTTCTAGTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATTAGCACATTGCCATCTATATATTACCTCTTTACTTCTAGTCAA  500

seq1  GGCAGTAAAGACACAGAAATGCCAGACAACTGGCCTGTGGGTGCACCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTAAAGACACAGAAATGCCAGACAACTGGCCTGTGGGTGCACCATT  550

seq1  GAGTAATGGCTGAGCTATGGCCAAGACCACTCTTCAGTCTCTTCATTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATGGCTGAGCTATGGCCAAGACCACTCTTCAGTCTCTTCATTACA  600

seq1  GTGTTTCCCAACCTTCATTAAATACTTAGGGCTTGAGCCTTTTACAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCCAACCTTCATTAAATACTTAGGGCTTGAGCCTTTTACAGACC  650

seq1  ACCTTGTTCCCTGTGAAAATGTGGTTCGCCCCAGTCCCCCTTGAATTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTCCCTGTGAAAATGTGGTTCGCCCCAGTCCCCCTTGAATTC  698